Wall clock time and date at job start Mon Mar 30 2020 05:41:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 O 1.20762 * 120.00352 * 2 1 4 4 C 1.50701 * 119.99920 * 179.97438 * 2 1 3 5 5 C 1.50696 * 109.47410 * 180.02562 * 4 2 1 6 6 C 1.36626 * 120.12225 * 265.02919 * 5 4 2 7 7 C 1.38781 * 120.23831 * 180.02562 * 6 5 4 8 8 Cl 1.73593 * 119.76801 * 179.97438 * 7 6 5 9 9 C 1.38813 * 120.46599 * 359.97438 * 7 6 5 10 10 C 1.36599 * 120.24068 * 359.66857 * 9 7 6 11 11 C 1.40735 * 120.12001 * 84.99874 * 5 4 2 12 12 C 1.41349 * 120.22754 * 0.02605 * 11 5 4 13 13 H 1.07994 * 120.00154 * 29.51933 * 12 11 5 14 14 C 1.39928 * 119.99759 * 209.51721 * 12 11 5 15 15 N 1.30837 * 119.99775 * 197.23061 * 14 12 11 16 16 Si 1.86799 * 120.00302 * 17.22629 * 14 12 11 17 17 H 1.48497 * 109.47467 * 270.00170 * 16 14 12 18 18 H 1.48501 * 109.46921 * 30.00321 * 16 14 12 19 19 H 1.48506 * 109.47237 * 150.00074 * 16 14 12 20 20 H 1.08992 * 109.47239 * 240.00026 * 1 2 3 21 21 H 1.08998 * 109.46606 * 0.02562 * 1 2 3 22 22 H 1.08997 * 109.46697 * 119.99985 * 1 2 3 23 23 H 1.08997 * 109.46882 * 60.00232 * 4 2 1 24 24 H 1.09004 * 109.46961 * 300.00267 * 4 2 1 25 25 H 1.08000 * 119.87984 * 359.96609 * 6 5 4 26 26 H 1.08001 * 119.88472 * 179.97438 * 9 7 6 27 27 H 1.07997 * 120.12711 * 180.30609 * 10 9 7 28 28 H 0.97004 * 120.00278 * 355.45332 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1109 1.0458 0.0000 4 6 2.2605 -1.3051 0.0006 5 6 3.7421 -1.0299 0.0011 6 6 4.4354 -1.0055 -1.1760 7 6 5.8000 -0.7528 -1.1782 8 17 6.6689 -0.7254 -2.6808 9 6 6.4750 -0.5217 0.0125 10 6 5.7996 -0.5343 1.1998 11 6 4.4166 -0.7962 1.2140 12 6 3.7091 -0.8190 2.4375 13 1 2.8341 -1.4429 2.5438 14 6 4.1426 -0.0330 3.5110 15 7 3.7194 -0.2893 4.7222 16 14 5.3255 1.3821 3.2148 17 1 6.7225 0.8924 3.3319 18 1 5.1067 1.9334 1.8534 19 1 5.0875 2.4456 4.2237 20 1 -0.3633 -0.5138 0.8899 21 1 -0.3632 1.0277 -0.0005 22 1 -0.3632 -0.5138 -0.8900 23 1 1.9972 -1.8770 -0.8892 24 1 1.9971 -1.8763 0.8908 25 1 3.9198 -1.1846 -2.1079 26 1 7.5371 -0.3264 -0.0001 27 1 6.3257 -0.3494 2.1247 28 1 3.0551 -0.9811 4.8677 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000307531068.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:41:08 Heat of formation + Delta-G solvation = -43.679379 kcal Electronic energy + Delta-G solvation = -14604.339457 eV Core-core repulsion = 12031.285822 eV Total energy + Delta-G solvation = -2573.053635 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 238.050 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -39.13116 -37.68965 -35.52264 -33.73508 -32.11348 -30.18726 -29.92698 -26.68453 -24.52553 -21.66997 -20.35715 -18.86304 -18.23566 -15.94923 -15.23575 -15.14950 -14.57058 -14.28212 -13.95269 -13.77283 -12.93903 -12.46364 -12.31117 -12.02687 -11.97118 -11.94543 -11.34224 -11.01162 -10.79228 -10.60999 -10.27169 -10.02346 -9.88976 -9.39444 -9.07718 -9.03113 -7.84892 -7.70811 -7.30524 -4.66042 2.41726 2.50272 2.65188 3.17069 3.27418 3.35028 3.57228 3.97527 4.36695 4.73498 5.25588 5.43770 5.57874 5.59497 5.79507 5.87366 5.96858 6.11675 6.25814 6.46015 6.57656 6.74620 7.15100 7.22535 7.37463 7.43424 7.61952 7.76308 8.18956 8.22730 8.37195 8.61177 9.90743 Molecular weight = 238.05amu Principal moments of inertia in cm(-1) A = 0.018054 B = 0.012150 C = 0.008208 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1550.531744 B = 2303.993798 C = 3410.293612 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C 0.351 3.649 3 O -0.441 6.441 4 C -0.104 4.104 5 C -0.170 4.170 6 C -0.054 4.054 7 C -0.157 4.157 8 Cl -0.127 7.127 9 C -0.059 4.059 10 C -0.238 4.238 11 C 0.113 3.887 12 C -0.504 4.504 13 H 0.080 0.920 14 C 0.046 3.954 15 N -0.810 5.810 16 Si 1.066 2.934 17 H -0.276 1.276 18 H -0.256 1.256 19 H -0.289 1.289 20 H 0.086 0.914 21 H 0.074 0.926 22 H 0.084 0.916 23 H 0.083 0.917 24 H 0.098 0.902 25 H 0.101 0.899 26 H 0.104 0.896 27 H 0.113 0.887 28 H 0.286 0.714 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.966 -1.606 -6.525 7.345 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.261 4.261 2 C 0.225 3.775 3 O -0.313 6.313 4 C -0.141 4.141 5 C -0.171 4.171 6 C -0.073 4.073 7 C -0.184 4.184 8 Cl -0.099 7.099 9 C -0.077 4.077 10 C -0.257 4.257 11 C 0.110 3.890 12 C -0.532 4.532 13 H 0.098 0.902 14 C -0.174 4.174 15 N -0.432 5.432 16 Si 0.892 3.108 17 H -0.203 1.203 18 H -0.181 1.181 19 H -0.216 1.216 20 H 0.105 0.895 21 H 0.093 0.907 22 H 0.102 0.898 23 H 0.101 0.899 24 H 0.116 0.884 25 H 0.119 0.881 26 H 0.122 0.878 27 H 0.131 0.869 28 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -1.782 0.093 -5.785 6.054 hybrid contribution -0.968 -1.477 -0.774 1.928 sum -2.749 -1.384 -6.559 7.245 Atomic orbital electron populations 1.22332 0.95833 1.04127 1.03759 1.24576 0.90837 0.91029 0.71064 1.90395 1.71859 1.34908 1.34122 1.20737 0.93546 0.96639 1.03153 1.18899 0.92988 1.12683 0.92525 1.20058 0.91883 0.98551 0.96827 1.20084 0.92331 1.21474 0.84532 1.98228 1.77827 1.98129 1.35761 1.20241 0.98266 0.97970 0.91268 1.20844 0.94664 1.13581 0.96568 1.17596 0.91163 0.87725 0.92521 1.20634 1.12554 1.23429 0.96564 0.90222 1.27256 0.98634 1.00349 0.91159 1.70569 1.22134 1.28652 1.21838 0.83687 0.74933 0.74592 0.77558 1.20276 1.18055 1.21612 0.89510 0.90688 0.89782 0.89857 0.88356 0.88075 0.87757 0.86921 0.90245 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -2.63 10.26 36.01 0.37 -2.27 15 2 C 0.35 6.42 7.26 -29.03 -0.21 6.21 15 3 O -0.44 -10.13 16.76 6.00 0.10 -10.03 15 4 C -0.10 -1.87 5.29 -29.04 -0.15 -2.02 15 5 C -0.17 -3.76 4.40 -104.26 -0.46 -4.22 15 6 C -0.05 -1.16 9.39 -39.96 -0.38 -1.53 15 7 C -0.16 -3.39 6.34 -39.17 -0.25 -3.63 15 8 Cl -0.13 -2.38 28.94 -51.86 -1.50 -3.88 15 9 C -0.06 -1.29 9.76 -39.96 -0.39 -1.68 15 10 C -0.24 -5.67 7.22 -39.22 -0.28 -5.96 15 11 C 0.11 2.78 5.13 -106.82 -0.55 2.23 15 12 C -0.50 -12.78 8.79 -37.77 -0.33 -13.12 15 13 H 0.08 2.00 6.61 -52.49 -0.35 1.65 15 14 C 0.05 1.19 5.42 -17.34 -0.09 1.10 15 15 N -0.81 -21.10 13.66 55.55 0.76 -20.34 15 16 Si 1.07 24.74 24.90 -169.99 -4.23 20.51 15 17 H -0.28 -5.99 6.44 56.52 0.36 -5.63 15 18 H -0.26 -6.20 7.02 56.52 0.40 -5.80 15 19 H -0.29 -6.53 7.11 56.52 0.40 -6.13 15 20 H 0.09 1.01 8.14 -51.93 -0.42 0.59 15 21 H 0.07 0.97 8.12 -51.93 -0.42 0.54 15 22 H 0.08 0.85 8.14 -51.93 -0.42 0.43 15 23 H 0.08 1.22 8.05 -51.93 -0.42 0.80 15 24 H 0.10 1.74 6.51 -51.93 -0.34 1.41 15 25 H 0.10 1.91 8.06 -52.49 -0.42 1.49 15 26 H 0.10 2.06 8.06 -52.49 -0.42 1.63 15 27 H 0.11 2.65 4.42 -52.49 -0.23 2.42 15 28 H 0.29 7.15 8.73 -40.82 -0.36 6.79 15 LS Contribution 258.92 15.07 3.90 3.90 Total: -1.00 -28.19 258.92 -6.34 -34.52 By element: Atomic # 1 Polarization: 2.84 SS G_CDS: -2.64 Total: 0.20 kcal Atomic # 6 Polarization: -22.17 SS G_CDS: -2.72 Total: -24.89 kcal Atomic # 7 Polarization: -21.10 SS G_CDS: 0.76 Total: -20.34 kcal Atomic # 8 Polarization: -10.13 SS G_CDS: 0.10 Total: -10.03 kcal Atomic # 14 Polarization: 24.74 SS G_CDS: -4.23 Total: 20.51 kcal Atomic # 17 Polarization: -2.38 SS G_CDS: -1.50 Total: -3.88 kcal Total LS contribution 3.90 Total: 3.90 kcal Total: -28.19 -6.34 -34.52 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000307531068.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.155 kcal (2) G-P(sol) polarization free energy of solvation -28.186 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.341 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.339 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.524 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.679 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds