Wall clock time and date at job start Mon Mar 30 2020 05:42:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35744 * 116.99583 * 2 1 4 4 C 1.39141 * 119.85082 * 359.97079 * 3 2 1 5 5 C 1.36523 * 120.30345 * 180.02562 * 4 3 2 6 6 C 1.40500 * 119.97964 * 359.72389 * 5 4 3 7 7 C 1.46151 * 120.14677 * 180.27668 * 6 5 4 8 8 C 1.38261 * 120.00113 * 30.24729 * 7 6 5 9 9 C 1.38779 * 120.00189 * 7.59754 * 8 7 6 10 10 H 1.07997 * 120.00201 * 14.83012 * 9 8 7 11 11 C 1.40588 * 119.99807 * 194.83514 * 9 8 7 12 12 N 1.30588 * 120.00385 * 359.97438 * 11 9 8 13 13 Si 1.86805 * 119.99895 * 179.97438 * 11 9 8 14 14 H 1.48502 * 109.47051 * 359.97438 * 13 11 9 15 15 H 1.48498 * 109.47189 * 119.99898 * 13 11 9 16 16 H 1.48496 * 109.47002 * 240.00284 * 13 11 9 17 17 C 1.40481 * 119.69561 * 0.57812 * 6 5 4 18 18 C 1.37655 * 119.70951 * 359.42290 * 17 6 5 19 19 Cl 1.73598 * 119.99948 * 180.25978 * 18 17 6 20 20 H 1.09003 * 109.47152 * 60.00673 * 1 2 3 21 21 H 1.09008 * 109.46896 * 180.02562 * 1 2 3 22 22 H 1.08994 * 109.47554 * 300.00022 * 1 2 3 23 23 H 1.07997 * 119.84817 * 0.03032 * 4 3 2 24 24 H 1.07991 * 120.01299 * 179.97438 * 5 4 3 25 25 H 1.08002 * 119.99488 * 210.24587 * 7 6 5 26 26 H 1.08005 * 119.99819 * 187.59689 * 8 7 6 27 27 H 0.96996 * 120.00642 * 179.97438 * 12 11 9 28 28 H 1.08000 * 120.14564 * 179.69976 * 17 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0452 1.2095 0.0000 4 6 1.2843 2.3744 -0.0006 5 6 1.8943 3.5958 -0.0011 6 6 3.2968 3.6800 0.0048 7 6 3.9537 4.9855 0.0103 8 6 3.3380 6.0667 0.6133 9 6 2.1753 5.8821 1.3482 10 1 1.8809 4.8886 1.6528 11 6 1.3806 6.9884 1.6962 12 7 1.7366 8.1897 1.3283 13 14 -0.1849 6.7398 2.6847 14 1 -0.3635 5.2942 2.9738 15 1 -0.0888 7.4922 3.9614 16 1 -1.3470 7.2353 1.9043 17 6 4.0647 2.5036 -0.0011 18 6 3.4364 1.2788 -0.0005 19 17 4.3779 -0.1797 -0.0009 20 1 -0.3633 0.5137 -0.8901 21 1 -0.3633 -1.0278 0.0005 22 1 -0.3634 0.5138 0.8899 23 1 0.2061 2.3122 -0.0006 24 1 1.2992 4.4969 -0.0020 25 1 4.9201 5.1057 -0.4566 26 1 3.7619 7.0549 0.5125 27 1 1.1882 8.9530 1.5680 28 1 5.1432 2.5599 -0.0015 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000308442381.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:42:37 Heat of formation + Delta-G solvation = -20.728076 kcal Electronic energy + Delta-G solvation = -14156.908873 eV Core-core repulsion = 11584.850481 eV Total energy + Delta-G solvation = -2572.058392 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 238.050 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -39.32700 -36.97777 -35.81171 -34.46610 -31.81208 -30.12112 -28.55460 -26.72214 -25.20095 -21.83899 -21.42856 -19.03809 -17.79191 -16.82665 -15.57739 -15.39258 -15.26487 -14.47042 -13.64541 -13.40270 -13.26040 -12.74143 -12.51989 -12.23777 -11.57489 -11.55147 -11.32869 -10.99628 -10.90542 -10.61160 -10.41958 -10.11329 -10.04681 -9.71222 -9.35560 -8.38698 -7.95415 -7.20195 -6.92783 -4.46948 2.06832 2.12827 2.77851 2.88100 2.90484 2.97516 3.58858 3.69580 3.83067 4.61562 5.22605 5.33796 5.44154 5.51188 5.71547 5.91338 6.24796 6.31189 6.43786 6.70097 6.76888 6.95541 7.12426 7.23160 7.46932 7.63306 7.77009 8.03119 8.10255 8.32915 8.70799 8.88161 9.80324 Molecular weight = 238.05amu Principal moments of inertia in cm(-1) A = 0.028772 B = 0.007256 C = 0.006049 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 972.951607 B = 3857.691493 C = 4627.803818 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.317 6.317 3 C 0.052 3.948 4 C -0.181 4.181 5 C -0.116 4.116 6 C 0.044 3.956 7 C -0.410 4.410 8 C 0.076 3.924 9 C -0.431 4.431 10 H 0.096 0.904 11 C 0.070 3.930 12 N -0.786 5.786 13 Si 0.912 3.088 14 H -0.253 1.253 15 H -0.268 1.268 16 H -0.268 1.268 17 C -0.144 4.144 18 C -0.040 4.040 19 Cl -0.095 7.095 20 H 0.049 0.951 21 H 0.089 0.911 22 H 0.049 0.951 23 H 0.117 0.883 24 H 0.144 0.856 25 H 0.081 0.919 26 H 0.086 0.914 27 H 0.289 0.711 28 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.837 -7.354 -0.449 8.307 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 O -0.232 6.232 3 C 0.008 3.992 4 C -0.200 4.200 5 C -0.134 4.134 6 C 0.043 3.957 7 C -0.431 4.431 8 C 0.055 3.945 9 C -0.458 4.458 10 H 0.113 0.887 11 C -0.152 4.152 12 N -0.409 5.409 13 Si 0.735 3.265 14 H -0.176 1.176 15 H -0.193 1.193 16 H -0.193 1.193 17 C -0.163 4.163 18 C -0.067 4.067 19 Cl -0.066 7.066 20 H 0.067 0.933 21 H 0.108 0.892 22 H 0.068 0.932 23 H 0.135 0.865 24 H 0.162 0.838 25 H 0.100 0.900 26 H 0.104 0.896 27 H 0.100 0.900 28 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -3.736 -7.388 -0.432 8.290 hybrid contribution -0.815 0.106 0.454 0.939 sum -4.551 -7.282 0.022 8.588 Atomic orbital electron populations 1.22877 0.79781 1.02693 1.00924 1.85980 1.20074 1.27067 1.90080 1.18491 0.90116 0.84385 1.06246 1.20742 0.98839 0.92173 1.08237 1.21502 0.95367 0.97018 0.99508 1.18824 0.91707 0.92762 0.92383 1.20885 1.04318 0.92434 1.25455 1.20521 0.91659 0.94966 0.87379 1.20141 1.05910 0.94825 1.24913 0.88657 1.26433 1.00364 0.94514 0.93896 1.69521 1.36865 0.99931 1.34605 0.86154 0.80047 0.80677 0.79589 1.17608 1.19326 1.19324 1.20972 0.99444 0.89447 1.06425 1.19946 0.88026 0.87062 1.11694 1.98282 1.72880 1.38043 1.97436 0.93264 0.89215 0.93250 0.86465 0.83833 0.90035 0.89622 0.89950 0.86018 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.43 9.80 101.05 0.99 1.42 15 2 O -0.32 -5.68 9.94 -18.94 -0.19 -5.87 15 3 C 0.05 1.04 6.70 -38.85 -0.26 0.78 15 4 C -0.18 -3.55 8.96 -39.87 -0.36 -3.90 15 5 C -0.12 -2.53 7.48 -39.35 -0.29 -2.83 15 6 C 0.04 1.01 5.48 -105.03 -0.58 0.44 15 7 C -0.41 -9.92 9.98 -36.40 -0.36 -10.28 15 8 C 0.08 1.90 9.35 -39.37 -0.37 1.53 15 9 C -0.43 -10.51 6.59 -38.50 -0.25 -10.76 15 10 H 0.10 2.33 5.29 -52.49 -0.28 2.05 15 11 C 0.07 1.61 5.51 -17.19 -0.09 1.51 15 12 N -0.79 -18.59 12.90 55.58 0.72 -17.87 15 13 Si 0.91 17.22 29.57 -169.99 -5.03 12.20 15 14 H -0.25 -4.80 7.11 56.52 0.40 -4.40 15 15 H -0.27 -4.98 7.11 56.52 0.40 -4.58 15 16 H -0.27 -4.94 7.11 56.52 0.40 -4.54 15 17 C -0.14 -3.07 9.59 -38.95 -0.37 -3.45 15 18 C -0.04 -0.83 6.33 -39.40 -0.25 -1.08 15 19 Cl -0.09 -1.72 28.49 -51.86 -1.48 -3.20 15 20 H 0.05 0.60 7.65 -51.93 -0.40 0.20 15 21 H 0.09 0.92 8.14 -51.92 -0.42 0.50 15 22 H 0.05 0.62 7.65 -51.93 -0.40 0.22 15 23 H 0.12 1.96 6.26 -52.49 -0.33 1.63 15 24 H 0.14 3.21 5.73 -52.49 -0.30 2.91 15 25 H 0.08 1.91 8.06 -52.49 -0.42 1.49 15 26 H 0.09 2.19 7.50 -52.48 -0.39 1.80 15 27 H 0.29 6.13 8.29 -40.82 -0.34 5.79 15 28 H 0.12 2.44 8.06 -52.49 -0.42 2.02 15 LS Contribution 260.63 15.07 3.93 3.93 Total: -1.00 -25.60 260.63 -6.74 -32.35 By element: Atomic # 1 Polarization: 7.59 SS G_CDS: -2.50 Total: 5.09 kcal Atomic # 6 Polarization: -24.41 SS G_CDS: -2.20 Total: -26.61 kcal Atomic # 7 Polarization: -18.59 SS G_CDS: 0.72 Total: -17.87 kcal Atomic # 8 Polarization: -5.68 SS G_CDS: -0.19 Total: -5.87 kcal Atomic # 14 Polarization: 17.22 SS G_CDS: -5.03 Total: 12.20 kcal Atomic # 17 Polarization: -1.72 SS G_CDS: -1.48 Total: -3.20 kcal Total LS contribution 3.93 Total: 3.93 kcal Total: -25.60 -6.74 -32.35 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000308442381.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.618 kcal (2) G-P(sol) polarization free energy of solvation -25.602 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.984 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.744 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.346 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.728 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds