Wall clock time and date at job start Mon Mar 30 2020 05:40:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 H 1.09004 * 109.46901 * 2 1 4 4 C 1.50702 * 109.46966 * 119.99933 * 2 1 3 5 5 O 1.21433 * 120.00165 * 95.00219 * 4 2 1 6 6 C 1.41028 * 119.99880 * 274.72372 * 4 2 1 7 7 H 1.08002 * 119.99766 * 0.27484 * 6 4 2 8 8 C 1.40459 * 120.00233 * 180.27760 * 6 4 2 9 9 N 1.30524 * 119.99716 * 0.02562 * 8 6 4 10 10 Si 1.86795 * 120.00267 * 179.97438 * 8 6 4 11 11 H 1.48500 * 109.46983 * 89.99853 * 10 8 6 12 12 H 1.48499 * 109.47218 * 209.99922 * 10 8 6 13 13 H 1.48491 * 109.47227 * 330.00110 * 10 8 6 14 14 C 1.50697 * 109.46954 * 239.99873 * 2 1 3 15 15 C 1.38240 * 119.98804 * 299.72587 * 14 2 1 16 16 C 1.38211 * 120.01071 * 179.73098 * 15 14 2 17 17 C 1.38349 * 119.99210 * 0.54205 * 16 15 14 18 18 Cl 1.73590 * 120.01913 * 179.70634 * 17 16 15 19 19 C 1.38355 * 119.97049 * 359.73283 * 17 16 15 20 20 C 1.38220 * 119.98605 * 359.97438 * 19 17 16 21 21 H 1.08995 * 109.47185 * 180.02562 * 1 2 3 22 22 H 1.09004 * 109.47057 * 299.99909 * 1 2 3 23 23 H 1.08994 * 109.47092 * 60.00004 * 1 2 3 24 24 H 0.96999 * 119.99951 * 180.02562 * 9 8 6 25 25 H 1.08000 * 119.99261 * 0.02562 * 15 14 2 26 26 H 1.08011 * 120.00591 * 180.27491 * 16 15 14 27 27 H 1.08002 * 120.01073 * 179.97438 * 19 17 16 28 28 H 1.07999 * 119.99388 * 180.02562 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 6 2.0324 -0.7104 1.2305 5 8 2.3212 -1.8886 1.1760 6 6 2.1726 -0.0054 2.4439 7 1 1.9157 1.0425 2.4923 8 6 2.6462 -0.6661 3.5893 9 7 2.9571 -1.9324 3.5306 10 14 2.8326 0.2679 5.1962 11 1 1.5686 0.1779 5.9705 12 1 3.9410 -0.3245 5.9874 13 1 3.1363 1.6926 4.9084 14 6 2.0323 -0.7104 -1.2304 15 6 1.7029 -2.0356 -1.4461 16 6 2.1587 -2.6860 -2.5772 17 6 2.9541 -2.0140 -3.4881 18 17 3.5332 -2.8325 -4.9052 19 6 3.2882 -0.6894 -3.2689 20 6 2.8268 -0.0382 -2.1404 21 1 -0.3633 -1.0276 0.0005 22 1 -0.3633 0.5138 0.8900 23 1 -0.3633 0.5138 -0.8899 24 1 3.2839 -2.3887 4.3217 25 1 1.0853 -2.5613 -0.7329 26 1 1.8976 -3.7201 -2.7478 27 1 3.9094 -0.1643 -3.9794 28 1 3.0872 0.9959 -1.9694 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000585163817.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:40:24 Heat of formation + Delta-G solvation = -39.655255 kcal Electronic energy + Delta-G solvation = -14272.107888 eV Core-core repulsion = 11699.228752 eV Total energy + Delta-G solvation = -2572.879136 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 238.050 amu Computer time = 0.19 seconds Orbital eigenvalues (eV) -39.16151 -36.96724 -36.00582 -33.12875 -32.36922 -30.57462 -28.85419 -26.78629 -23.72593 -22.29131 -21.37507 -18.95969 -16.60247 -16.37124 -15.40659 -14.99456 -14.56906 -13.65986 -13.54537 -13.18875 -12.94432 -12.65614 -12.58615 -11.80530 -11.56561 -11.35154 -11.30412 -11.03815 -10.94744 -10.53760 -10.48776 -10.22162 -10.19758 -10.05637 -8.95253 -8.54932 -8.06869 -7.34993 -6.25605 -4.93861 1.66432 1.81475 2.45312 3.02315 3.11689 3.14816 3.99511 4.12629 4.24256 5.19539 5.29422 5.32714 5.52477 5.80476 5.89939 5.98311 6.06291 6.22835 6.32487 6.46054 6.62056 6.66945 6.69431 6.79564 6.91197 7.22405 7.28886 7.35105 8.04799 8.79109 8.84999 10.30389 10.53102 Molecular weight = 238.05amu Principal moments of inertia in cm(-1) A = 0.044621 B = 0.005783 C = 0.005560 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 627.357345 B = 4840.484541 C = 5034.334092 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 C -0.104 4.104 3 H 0.076 0.924 4 C 0.372 3.628 5 O -0.536 6.536 6 C -0.532 4.532 7 H 0.069 0.931 8 C 0.083 3.917 9 N -0.739 5.739 10 Si 0.904 3.096 11 H -0.269 1.269 12 H -0.277 1.277 13 H -0.262 1.262 14 C -0.040 4.040 15 C -0.066 4.066 16 C -0.118 4.118 17 C -0.048 4.048 18 Cl -0.094 7.094 19 C -0.120 4.120 20 C -0.114 4.114 21 H 0.052 0.948 22 H 0.061 0.939 23 H 0.043 0.957 24 H 0.273 0.727 25 H 0.136 0.864 26 H 0.125 0.875 27 H 0.124 0.876 28 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.683 2.676 -8.897 9.443 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C -0.124 4.124 3 H 0.095 0.905 4 C 0.266 3.734 5 O -0.424 6.424 6 C -0.564 4.564 7 H 0.087 0.913 8 C -0.140 4.140 9 N -0.367 5.367 10 Si 0.728 3.272 11 H -0.195 1.195 12 H -0.202 1.202 13 H -0.186 1.186 14 C -0.040 4.040 15 C -0.084 4.084 16 C -0.137 4.137 17 C -0.074 4.074 18 Cl -0.065 7.065 19 C -0.139 4.139 20 C -0.132 4.132 21 H 0.071 0.929 22 H 0.080 0.920 23 H 0.062 0.938 24 H 0.084 0.916 25 H 0.154 0.846 26 H 0.143 0.857 27 H 0.142 0.858 28 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -1.435 1.862 -9.017 9.319 hybrid contribution 0.258 0.543 0.691 0.916 sum -1.176 2.405 -8.326 8.746 Atomic orbital electron populations 1.21555 0.94031 1.01619 1.00817 1.20909 0.96445 1.00080 0.94963 0.90540 1.19329 0.79183 0.88447 0.86469 1.90408 1.48987 1.17405 1.85584 1.20761 1.42165 0.98016 0.95420 0.91291 1.26002 0.93043 0.94517 1.00454 1.69945 1.27824 1.09450 1.29504 0.86418 0.78634 0.80729 0.81414 1.19452 1.20244 1.18602 1.19995 0.95150 0.94283 0.94583 1.21075 0.98794 0.93982 0.94567 1.21010 0.98496 1.00022 0.94145 1.20787 1.02414 0.93719 0.90479 1.98318 1.88185 1.79557 1.40469 1.20840 1.01492 0.92873 0.98707 1.21016 0.98405 1.00027 0.93788 0.92897 0.92001 0.93806 0.91606 0.84630 0.85713 0.85822 0.85692 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -2.23 8.99 37.16 0.33 -1.89 15 2 C -0.10 -2.19 2.78 -92.92 -0.26 -2.45 15 3 H 0.08 1.50 7.86 -51.93 -0.41 1.09 15 4 C 0.37 9.87 6.00 -33.25 -0.20 9.67 15 5 O -0.54 -15.99 13.06 5.42 0.07 -15.92 15 6 C -0.53 -14.23 9.21 -37.69 -0.35 -14.58 15 7 H 0.07 1.70 7.85 -52.49 -0.41 1.29 15 8 C 0.08 2.20 5.50 -17.27 -0.10 2.10 15 9 N -0.74 -20.93 11.72 55.57 0.65 -20.28 15 10 Si 0.90 19.09 29.56 -169.99 -5.03 14.06 15 11 H -0.27 -5.55 7.11 56.52 0.40 -5.15 15 12 H -0.28 -5.75 7.11 56.52 0.40 -5.35 15 13 H -0.26 -5.38 7.11 56.52 0.40 -4.98 15 14 C -0.04 -0.79 4.65 -104.62 -0.49 -1.28 15 15 C -0.07 -1.31 7.89 -39.59 -0.31 -1.62 15 16 C -0.12 -2.07 9.83 -39.55 -0.39 -2.46 15 17 C -0.05 -0.79 6.32 -39.50 -0.25 -1.04 15 18 Cl -0.09 -1.35 28.96 -51.86 -1.50 -2.85 15 19 C -0.12 -1.93 9.83 -39.54 -0.39 -2.32 15 20 C -0.11 -1.98 9.67 -39.59 -0.38 -2.36 15 21 H 0.05 0.98 7.40 -51.93 -0.38 0.59 15 22 H 0.06 1.10 8.14 -51.93 -0.42 0.67 15 23 H 0.04 0.67 8.14 -51.93 -0.42 0.25 15 24 H 0.27 6.99 8.29 -40.82 -0.34 6.65 15 25 H 0.14 2.85 6.88 -52.49 -0.36 2.49 15 26 H 0.12 1.94 8.06 -52.48 -0.42 1.52 15 27 H 0.12 1.67 8.06 -52.49 -0.42 1.24 15 28 H 0.13 1.89 7.94 -52.49 -0.42 1.47 15 LS Contribution 263.92 15.07 3.98 3.98 Total: -1.00 -30.06 263.92 -7.41 -37.47 By element: Atomic # 1 Polarization: 4.59 SS G_CDS: -2.81 Total: 1.78 kcal Atomic # 6 Polarization: -15.46 SS G_CDS: -2.77 Total: -18.23 kcal Atomic # 7 Polarization: -20.93 SS G_CDS: 0.65 Total: -20.28 kcal Atomic # 8 Polarization: -15.99 SS G_CDS: 0.07 Total: -15.92 kcal Atomic # 14 Polarization: 19.09 SS G_CDS: -5.03 Total: 14.06 kcal Atomic # 17 Polarization: -1.35 SS G_CDS: -1.50 Total: -2.85 kcal Total LS contribution 3.98 Total: 3.98 kcal Total: -30.06 -7.41 -37.47 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000585163817.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.184 kcal (2) G-P(sol) polarization free energy of solvation -30.062 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.246 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.410 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.471 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.655 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds