Wall clock time and date at job start Mon Mar 30 2020 05:22:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 N 1.46497 * 109.46971 * 2 1 4 4 C 1.37964 * 127.13378 * 273.76267 * 3 2 1 5 5 C 1.39749 * 126.53581 * 0.02567 * 4 3 2 6 6 H 1.08002 * 119.99376 * 359.95372 * 5 4 3 7 7 C 1.40276 * 120.00213 * 179.97438 * 5 4 3 8 8 N 1.30666 * 120.00357 * 359.97438 * 7 5 4 9 9 Si 1.86803 * 119.99872 * 180.02562 * 7 5 4 10 10 H 1.48496 * 109.47155 * 60.00275 * 9 7 5 11 11 H 1.48506 * 109.47078 * 179.97438 * 9 7 5 12 12 H 1.48493 * 109.47081 * 299.99909 * 9 7 5 13 13 N 1.33282 * 106.93417 * 179.97438 * 4 3 2 14 14 N 1.28515 * 109.75377 * 0.02562 * 13 4 3 15 15 C 1.32451 * 110.13806 * 359.97438 * 14 13 4 16 16 C 1.47407 * 126.28038 * 179.73789 * 15 14 13 17 17 C 1.39859 * 120.17074 * 160.30728 * 16 15 14 18 18 C 1.37863 * 119.82946 * 179.72389 * 17 16 15 19 19 C 1.38439 * 120.17087 * 0.53169 * 18 17 16 20 20 C 1.38437 * 120.33751 * 359.76527 * 19 18 17 21 21 C 1.37866 * 120.17280 * 359.95449 * 20 19 18 22 22 H 1.08994 * 109.47624 * 60.00082 * 1 2 3 23 23 H 1.09008 * 109.47591 * 180.02562 * 1 2 3 24 24 H 1.09005 * 109.47413 * 300.00000 * 1 2 3 25 25 H 1.09001 * 109.46802 * 239.99612 * 2 1 3 26 26 H 1.09003 * 109.46865 * 119.99745 * 2 1 3 27 27 H 0.96999 * 120.00892 * 180.02562 * 8 7 5 28 28 H 1.08004 * 120.08014 * 359.97438 * 17 16 15 29 29 H 1.07997 * 119.92120 * 180.27680 * 18 17 16 30 30 H 1.07995 * 119.83274 * 179.74495 * 19 18 17 31 31 H 1.08000 * 119.91504 * 179.97438 * 20 19 18 32 32 H 1.08001 * 120.09051 * 180.02562 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 2.2278 2.1905 -1.0975 5 6 2.0134 1.8495 -2.4357 6 1 1.6481 0.8656 -2.6903 7 6 2.2730 2.7851 -3.4482 8 7 2.7148 3.9755 -3.1402 9 14 1.9857 2.3294 -5.2369 10 1 0.5573 1.9746 -5.4340 11 1 2.3325 3.4843 -6.1037 12 1 2.8383 1.1675 -5.5948 13 7 2.6727 3.3599 -0.6383 14 7 2.7490 3.3223 0.6441 15 6 2.3611 2.1368 1.0894 16 6 2.3136 1.7072 2.4987 17 6 1.5213 0.6179 2.8752 18 6 1.4865 0.2186 4.1943 19 6 2.2247 0.8997 5.1471 20 6 3.0065 1.9827 4.7832 21 6 3.0561 2.3905 3.4672 22 1 -0.3634 0.5138 -0.8899 23 1 -0.3634 -1.0277 0.0005 24 1 -0.3634 0.5138 0.8900 25 1 1.8933 -0.5139 -0.8900 26 1 1.8933 -0.5138 0.8900 27 1 2.8940 4.6226 -3.8402 28 1 0.9414 0.0884 2.1337 29 1 0.8787 -0.6251 4.4859 30 1 2.1902 0.5848 6.1795 31 1 3.5792 2.5094 5.5322 32 1 3.6668 3.2353 3.1848 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259873420.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:22:36 Heat of formation + Delta-G solvation = 89.938797 kcal Electronic energy + Delta-G solvation = -16891.440973 eV Core-core repulsion = 14238.858190 eV Total energy + Delta-G solvation = -2652.582784 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 243.107 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -40.77166 -38.36989 -34.57637 -33.77527 -31.38790 -30.50146 -29.58834 -28.44253 -25.56543 -23.25564 -22.48854 -22.00435 -20.28184 -19.43383 -17.27910 -16.30806 -15.76113 -15.44680 -14.70792 -14.46876 -14.08007 -13.72408 -13.20973 -13.01779 -12.72458 -12.47165 -12.14162 -11.75933 -11.58026 -11.30812 -11.17300 -10.85817 -10.75020 -10.60947 -10.30096 -9.69059 -9.61503 -8.84251 -8.64012 -8.57764 -8.38609 -7.29617 -6.69978 -4.61329 1.53203 1.78602 2.93625 3.03097 3.05400 3.44624 3.77629 4.01892 4.18361 4.63158 5.20063 5.24920 5.26215 5.29612 5.30669 5.50401 5.60841 5.70843 5.81514 5.90115 5.99674 6.12965 6.31489 6.36951 6.51693 6.74217 6.78383 6.85469 6.90471 7.16403 7.23642 7.37179 7.62448 8.06076 8.14156 8.66245 8.86458 10.22238 10.66683 Molecular weight = 243.11amu Principal moments of inertia in cm(-1) A = 0.041183 B = 0.006472 C = 0.005695 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 679.731561 B = 4325.177856 C = 4915.756217 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C 0.118 3.882 3 N -0.523 5.523 4 C 0.344 3.656 5 C -0.442 4.442 6 H 0.084 0.916 7 C 0.078 3.922 8 N -0.731 5.731 9 Si 0.920 3.080 10 H -0.265 1.265 11 H -0.275 1.275 12 H -0.264 1.264 13 N -0.333 5.333 14 N -0.267 5.267 15 C 0.077 3.923 16 C 0.046 3.954 17 C -0.149 4.149 18 C -0.115 4.115 19 C -0.147 4.147 20 C -0.115 4.115 21 C -0.106 4.106 22 H 0.068 0.932 23 H 0.063 0.937 24 H 0.058 0.942 25 H 0.081 0.919 26 H 0.079 0.921 27 H 0.281 0.719 28 H 0.129 0.871 29 H 0.116 0.884 30 H 0.114 0.886 31 H 0.118 0.882 32 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.846 -8.377 6.999 11.281 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.230 4.230 2 C -0.007 4.007 3 N -0.223 5.223 4 C 0.103 3.897 5 C -0.481 4.481 6 H 0.102 0.898 7 C -0.149 4.149 8 N -0.354 5.354 9 Si 0.744 3.256 10 H -0.189 1.189 11 H -0.200 1.200 12 H -0.189 1.189 13 N -0.182 5.182 14 N -0.111 5.111 15 C -0.180 4.180 16 C 0.043 3.957 17 C -0.169 4.169 18 C -0.133 4.133 19 C -0.166 4.166 20 C -0.133 4.133 21 C -0.127 4.127 22 H 0.087 0.913 23 H 0.082 0.918 24 H 0.077 0.923 25 H 0.099 0.901 26 H 0.097 0.903 27 H 0.093 0.907 28 H 0.147 0.853 29 H 0.134 0.866 30 H 0.132 0.868 31 H 0.136 0.864 32 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -2.253 -6.695 6.903 9.877 hybrid contribution -0.670 -1.591 -0.872 1.934 sum -2.924 -8.286 6.031 10.657 Atomic orbital electron populations 1.22233 0.95829 1.01673 1.03239 1.21463 0.94401 0.82009 1.02813 1.46151 1.57434 1.12338 1.06418 1.21524 0.93797 0.85760 0.88583 1.18154 1.42514 1.00641 0.86830 0.89755 1.25842 0.93464 0.94213 1.01340 1.69928 1.26617 1.03591 1.35288 0.86184 0.79773 0.79078 0.80583 1.18918 1.19996 1.18910 1.75669 1.26740 1.17377 0.98373 1.74375 1.14128 1.15411 1.07225 1.21817 1.15965 0.92347 0.87844 1.17675 0.95132 0.94146 0.88728 1.21612 1.00524 0.98163 0.96620 1.20905 0.99658 0.99783 0.92967 1.21048 0.99271 0.97365 0.98893 1.20994 0.99301 0.97152 0.95828 1.21217 0.99262 1.00114 0.92065 0.91318 0.91779 0.92327 0.90112 0.90269 0.90742 0.85335 0.86620 0.86818 0.86378 0.85323 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.68 9.59 37.16 0.36 -2.32 16 2 C 0.12 2.12 5.77 -4.04 -0.02 2.10 16 3 N -0.52 -12.41 2.85 -113.36 -0.32 -12.73 16 4 C 0.34 9.49 7.52 -155.03 -1.17 8.32 16 5 C -0.44 -11.49 9.06 -38.25 -0.35 -11.84 16 6 H 0.08 1.98 7.39 -52.49 -0.39 1.59 16 7 C 0.08 1.96 5.50 -17.28 -0.10 1.86 16 8 N -0.73 -19.87 11.93 55.57 0.66 -19.21 16 9 Si 0.92 18.19 29.56 -169.99 -5.03 13.17 16 10 H -0.26 -5.11 7.11 56.52 0.40 -4.70 16 11 H -0.28 -5.34 7.11 56.52 0.40 -4.93 16 12 H -0.26 -5.11 7.11 56.52 0.40 -4.71 16 13 N -0.33 -10.02 10.49 31.21 0.33 -9.69 16 14 N -0.27 -7.47 12.05 32.56 0.39 -7.08 16 15 C 0.08 1.89 7.67 -153.55 -1.18 0.71 16 16 C 0.05 0.93 5.86 -104.95 -0.62 0.32 16 17 C -0.15 -2.52 8.59 -39.11 -0.34 -2.85 16 18 C -0.12 -1.62 10.03 -39.64 -0.40 -2.02 16 19 C -0.15 -1.99 10.04 -39.43 -0.40 -2.39 16 20 C -0.11 -1.70 10.03 -39.64 -0.40 -2.09 16 21 C -0.11 -1.94 9.71 -39.11 -0.38 -2.32 16 22 H 0.07 1.19 8.14 -51.93 -0.42 0.77 16 23 H 0.06 0.77 8.14 -51.92 -0.42 0.34 16 24 H 0.06 0.94 6.93 -51.93 -0.36 0.58 16 25 H 0.08 1.39 7.67 -51.93 -0.40 0.99 16 26 H 0.08 1.27 5.78 -51.93 -0.30 0.97 16 27 H 0.28 6.90 8.29 -40.82 -0.34 6.56 16 28 H 0.13 2.03 3.33 -52.48 -0.17 1.85 16 29 H 0.12 1.29 8.06 -52.49 -0.42 0.87 16 30 H 0.11 1.21 8.06 -52.49 -0.42 0.78 16 31 H 0.12 1.42 8.06 -52.49 -0.42 0.99 16 32 H 0.13 2.43 7.98 -52.49 -0.42 2.01 16 LS Contribution 275.42 15.07 4.15 4.15 Total: -1.00 -31.88 275.42 -8.08 -39.96 By element: Atomic # 1 Polarization: 7.25 SS G_CDS: -3.29 Total: 3.96 kcal Atomic # 6 Polarization: -7.55 SS G_CDS: -4.97 Total: -12.52 kcal Atomic # 7 Polarization: -49.78 SS G_CDS: 1.06 Total: -48.72 kcal Atomic # 14 Polarization: 18.19 SS G_CDS: -5.03 Total: 13.17 kcal Total LS contribution 4.15 Total: 4.15 kcal Total: -31.88 -8.08 -39.96 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259873420.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 129.894 kcal (2) G-P(sol) polarization free energy of solvation -31.877 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 98.017 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.079 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.955 kcal (6) G-S(sol) free energy of system = (1) + (5) 89.939 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds