Wall clock time and date at job start Mon Mar 30 2020 06:03:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38816 * 119.72808 * 2 1 4 4 C 1.38303 * 120.58949 * 180.29891 * 3 2 1 5 5 C 1.38444 * 120.05432 * 359.44913 * 4 3 2 6 6 O 1.35640 * 120.27186 * 180.25139 * 5 4 3 7 7 C 1.42897 * 116.99775 * 359.97438 * 6 5 4 8 8 F 1.39901 * 109.47153 * 60.00006 * 7 6 5 9 9 F 1.39894 * 109.47404 * 180.02562 * 7 6 5 10 10 F 1.39905 * 109.47102 * 300.00277 * 7 6 5 11 11 C 1.41328 * 119.46443 * 0.26947 * 5 4 3 12 12 C 1.41155 * 120.28730 * 180.02562 * 11 5 4 13 13 H 1.07993 * 119.99969 * 334.62274 * 12 11 5 14 14 C 1.39933 * 119.99662 * 154.62403 * 12 11 5 15 15 N 1.30869 * 120.00295 * 342.97596 * 14 12 11 16 16 Si 1.86798 * 119.99965 * 162.97763 * 14 12 11 17 17 H 1.48496 * 109.47347 * 89.99968 * 16 14 12 18 18 H 1.48505 * 109.47384 * 210.00283 * 16 14 12 19 19 H 1.48511 * 109.47009 * 329.99803 * 16 14 12 20 20 C 1.36489 * 119.73027 * 179.74561 * 2 1 3 21 21 H 1.09000 * 109.47282 * 270.25080 * 1 2 3 22 22 H 1.08999 * 109.46909 * 30.25771 * 1 2 3 23 23 H 1.09004 * 109.46717 * 150.25503 * 1 2 3 24 24 H 1.08005 * 119.70968 * 0.02562 * 3 2 1 25 25 H 1.08001 * 119.97371 * 179.71587 * 4 3 2 26 26 H 0.97001 * 120.00312 * 179.97438 * 15 14 12 27 27 H 1.07996 * 120.03526 * 359.97438 * 20 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1954 1.2055 0.0000 4 6 3.5783 1.2263 -0.0062 5 6 4.2896 0.0385 -0.0010 6 8 5.6459 0.0538 -0.0019 7 6 6.2802 1.3343 -0.0090 8 9 5.8969 2.0509 1.1298 9 9 7.6691 1.1667 -0.0095 10 9 5.8955 2.0390 -1.1547 11 6 3.5911 -1.1901 0.0049 12 6 4.2989 -2.4113 0.0109 13 1 5.3008 -2.4567 -0.3897 14 6 3.7023 -3.5631 0.5358 15 7 2.6522 -3.4614 1.3101 16 14 4.4049 -5.2460 0.1313 17 1 5.4255 -5.6132 1.1454 18 1 3.3136 -6.2532 0.1401 19 1 5.0339 -5.2096 -1.2135 20 6 2.1839 -1.1852 0.0053 21 1 -0.3634 0.0045 1.0276 22 1 -0.3633 0.8877 -0.5178 23 1 -0.3633 -0.8923 -0.5099 24 1 1.6462 2.1355 0.0004 25 1 4.1037 2.1698 -0.0108 26 1 2.2385 -4.2598 1.6737 27 1 1.6401 -2.1183 0.0098 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000044369803.mol2 27 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:03:39 Heat of formation + Delta-G solvation = -189.339021 kcal Electronic energy + Delta-G solvation = -17988.542181 eV Core-core repulsion = 14488.836276 eV Total energy + Delta-G solvation = -3499.705905 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 246.061 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -49.76705 -47.53250 -47.33839 -38.84069 -36.62057 -33.94076 -31.06027 -29.80436 -26.13286 -25.60375 -24.36481 -21.55363 -20.40562 -18.58089 -18.45311 -18.18559 -17.06616 -15.69897 -14.97495 -14.49469 -14.40043 -14.10468 -14.06250 -13.85243 -13.61055 -13.38749 -13.31846 -12.81746 -12.66158 -12.62884 -12.22565 -11.64308 -11.48481 -11.11311 -10.97234 -10.65463 -10.26887 -9.92776 -9.67084 -9.26679 -7.64357 -7.21658 -6.85659 -4.45146 2.45149 2.60676 2.71754 3.03330 3.06592 3.13726 3.69925 3.87026 4.45206 4.58388 4.69643 5.40989 5.82495 6.01417 6.07395 6.13585 6.36167 6.55344 6.71090 6.92199 7.11761 7.13699 7.44504 7.51232 7.90219 7.99443 8.07270 8.46610 8.67214 8.78002 10.06065 Molecular weight = 246.06amu Principal moments of inertia in cm(-1) A = 0.019068 B = 0.010050 C = 0.006989 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1468.068446 B = 2785.407280 C = 4005.143232 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 C -0.085 4.085 3 C -0.211 4.211 4 C -0.148 4.148 5 C -0.038 4.038 6 O -0.294 6.294 7 C 0.594 3.406 8 F -0.177 7.177 9 F -0.149 7.149 10 F -0.179 7.179 11 C 0.122 3.878 12 C -0.447 4.447 13 H 0.085 0.915 14 C 0.075 3.925 15 N -0.789 5.789 16 Si 0.912 3.088 17 H -0.268 1.268 18 H -0.275 1.275 19 H -0.259 1.259 20 C -0.139 4.139 21 H 0.056 0.944 22 H 0.050 0.950 23 H 0.054 0.946 24 H 0.096 0.904 25 H 0.102 0.898 26 H 0.283 0.717 27 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.354 3.964 -1.641 4.499 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C -0.086 4.086 3 C -0.230 4.230 4 C -0.166 4.166 5 C -0.079 4.079 6 O -0.214 6.214 7 C 0.503 3.497 8 F -0.159 7.159 9 F -0.131 7.131 10 F -0.161 7.161 11 C 0.119 3.881 12 C -0.476 4.476 13 H 0.103 0.897 14 C -0.144 4.144 15 N -0.414 5.414 16 Si 0.736 3.264 17 H -0.193 1.193 18 H -0.200 1.200 19 H -0.183 1.183 20 C -0.159 4.159 21 H 0.075 0.925 22 H 0.069 0.931 23 H 0.073 0.927 24 H 0.114 0.886 25 H 0.120 0.880 26 H 0.094 0.906 27 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 1.319 3.685 -1.492 4.188 hybrid contribution 0.478 -0.301 -0.010 0.565 sum 1.796 3.384 -1.501 4.115 Atomic orbital electron populations 1.20636 0.93322 1.00871 1.00884 1.19315 0.94507 0.93647 1.01104 1.19997 0.92502 0.96174 1.14375 1.20837 0.95688 0.94687 1.05427 1.18872 0.76641 0.95501 1.16926 1.86319 1.22408 1.22538 1.90160 1.19598 0.76481 0.79273 0.74389 1.93234 1.91045 1.79337 1.52295 1.93206 1.27992 1.95482 1.96417 1.93230 1.91028 1.79968 1.51849 1.16958 0.91348 0.89105 0.90738 1.19481 1.01808 0.92070 1.34253 0.89736 1.25941 0.94238 1.01674 0.92514 1.69823 1.18096 1.31969 1.21487 0.86235 0.79443 0.80311 0.80389 1.19316 1.19968 1.18279 1.20801 0.92728 0.96810 1.05531 0.92516 0.93145 0.92652 0.88605 0.88049 0.90575 0.85246 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.80 9.99 36.01 0.36 -1.44 15 2 C -0.09 -1.91 5.84 -105.04 -0.61 -2.53 15 3 C -0.21 -4.66 9.69 -39.34 -0.38 -5.04 15 4 C -0.15 -3.38 8.26 -39.48 -0.33 -3.71 15 5 C -0.04 -0.94 6.52 -38.33 -0.25 -1.19 15 6 O -0.29 -6.89 9.67 -18.62 -0.18 -7.07 15 7 C 0.59 11.60 3.42 101.05 0.35 11.94 15 8 F -0.18 -3.39 15.57 2.25 0.04 -3.35 15 9 F -0.15 -2.64 17.53 2.25 0.04 -2.60 15 10 F -0.18 -3.35 15.57 2.25 0.04 -3.32 15 11 C 0.12 3.21 5.58 -106.68 -0.59 2.62 15 12 C -0.45 -11.76 8.72 -37.84 -0.33 -12.09 15 13 H 0.08 2.20 7.66 -52.49 -0.40 1.80 15 14 C 0.07 1.83 5.15 -17.33 -0.09 1.74 15 15 N -0.79 -19.62 10.97 55.55 0.61 -19.02 15 16 Si 0.91 18.29 29.59 -169.99 -5.03 13.26 15 17 H -0.27 -5.34 7.11 56.52 0.40 -4.94 15 18 H -0.27 -5.32 7.11 56.52 0.40 -4.92 15 19 H -0.26 -5.19 7.11 56.52 0.40 -4.78 15 20 C -0.14 -3.48 8.25 -39.27 -0.32 -3.81 15 21 H 0.06 0.97 8.14 -51.93 -0.42 0.54 15 22 H 0.05 0.79 8.08 -51.93 -0.42 0.38 15 23 H 0.05 0.94 8.07 -51.93 -0.42 0.52 15 24 H 0.10 1.86 8.06 -52.48 -0.42 1.44 15 25 H 0.10 2.13 5.11 -52.49 -0.27 1.86 15 26 H 0.28 6.37 8.30 -40.82 -0.34 6.03 15 27 H 0.13 3.28 6.19 -52.49 -0.32 2.95 15 LS Contribution 251.25 15.07 3.79 3.79 Total: -1.00 -26.21 251.25 -4.72 -30.94 By element: Atomic # 1 Polarization: 2.69 SS G_CDS: -1.81 Total: 0.88 kcal Atomic # 6 Polarization: -11.31 SS G_CDS: -2.20 Total: -13.51 kcal Atomic # 7 Polarization: -19.62 SS G_CDS: 0.61 Total: -19.02 kcal Atomic # 8 Polarization: -6.89 SS G_CDS: -0.18 Total: -7.07 kcal Atomic # 9 Polarization: -9.38 SS G_CDS: 0.11 Total: -9.27 kcal Atomic # 14 Polarization: 18.29 SS G_CDS: -5.03 Total: 13.26 kcal Total LS contribution 3.79 Total: 3.79 kcal Total: -26.21 -4.72 -30.94 kcal The number of atoms in the molecule is 27 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000044369803.mol2 27 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -158.403 kcal (2) G-P(sol) polarization free energy of solvation -26.214 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -184.617 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.722 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.936 kcal (6) G-S(sol) free energy of system = (1) + (5) -189.339 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds