Wall clock time and date at job start Mon Mar 30 2020 05:29:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13603 * 1 3 3 C 1.43196 * 179.97438 * 2 1 4 4 C 1.36348 * 126.71917 * 346.77849 * 3 2 1 5 5 N 1.36033 * 109.72315 * 180.33599 * 4 3 2 6 6 C 1.37075 * 124.85825 * 179.77624 * 5 4 3 7 7 H 1.07994 * 119.99982 * 204.37675 * 6 5 4 8 8 C 1.38955 * 119.99747 * 24.36712 * 6 5 4 9 9 N 1.31359 * 120.00128 * 9.81022 * 8 6 5 10 10 Si 1.86795 * 119.99848 * 189.80460 * 8 6 5 11 11 H 1.48506 * 109.47443 * 0.02562 * 10 8 6 12 12 H 1.48503 * 109.47095 * 120.00522 * 10 8 6 13 13 H 1.48505 * 109.47238 * 240.00464 * 10 8 6 14 14 C 1.38328 * 110.28725 * 359.73603 * 5 4 3 15 15 C 1.40423 * 107.44986 * 0.02562 * 14 5 4 16 16 C 1.39176 * 120.10605 * 180.02562 * 15 14 5 17 17 C 1.37935 * 119.70403 * 359.97438 * 16 15 14 18 18 C 1.38622 * 120.29736 * 359.97438 * 17 16 15 19 19 C 1.38067 * 120.59534 * 359.97438 * 18 17 16 20 20 Cl 1.73601 * 120.04538 * 179.97438 * 19 18 17 21 21 H 1.08002 * 125.14141 * 0.03992 * 4 3 2 22 22 H 0.96997 * 120.00284 * 179.97438 * 9 8 6 23 23 H 1.07999 * 120.14764 * 180.02562 * 16 15 14 24 24 H 1.08000 * 119.85166 * 180.02562 * 17 16 15 25 25 H 1.08005 * 119.69637 * 180.02562 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.3837 -1.0630 0.2500 5 7 4.6844 -0.6736 0.1663 6 6 5.7628 -1.4958 0.3663 7 1 6.7111 -1.0783 0.6704 8 6 5.6355 -2.8667 0.1779 9 7 4.5483 -3.3557 -0.3738 10 14 7.0106 -4.0140 0.7089 11 1 8.1179 -3.2197 1.2992 12 1 6.4942 -4.9706 1.7205 13 1 7.5129 -4.7638 -0.4705 14 6 4.7632 0.6707 -0.1503 15 6 3.4498 1.1524 -0.2716 16 6 3.2228 2.4885 -0.5886 17 6 4.2933 3.3364 -0.7823 18 6 5.5908 2.8634 -0.6621 19 6 5.8302 1.5407 -0.3470 20 17 7.4608 0.9634 -0.2006 21 1 3.0479 -2.0624 0.4841 22 1 4.4596 -4.3126 -0.5057 23 1 2.2129 2.8598 -0.6817 24 1 4.1199 4.3737 -1.0280 25 1 6.4218 3.5360 -0.8154 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000084872542.mol2 25 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:29:57 Heat of formation + Delta-G solvation = 71.148723 kcal Electronic energy + Delta-G solvation = -14643.718337 eV Core-core repulsion = 12034.333590 eV Total energy + Delta-G solvation = -2609.384747 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 246.025 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -40.55300 -36.75725 -35.78452 -35.50827 -33.36983 -31.18597 -29.01628 -28.34526 -25.47934 -22.06795 -21.83466 -20.99427 -18.10511 -17.05370 -15.99302 -15.16551 -14.81230 -14.38124 -14.12149 -13.75177 -13.61225 -12.55631 -12.48896 -12.26471 -12.11308 -11.86177 -11.69946 -11.48992 -11.27342 -10.95519 -10.71234 -10.67214 -10.44567 -9.74347 -9.40985 -8.68483 -7.54969 -7.19002 -6.90179 -4.61733 1.61133 2.12317 2.77203 2.80303 2.94166 3.00095 3.11813 3.55343 3.66083 4.12480 4.33412 4.66119 4.69489 5.12691 5.45466 5.56168 5.82046 5.93636 6.23164 6.47131 6.52636 6.61845 6.88210 6.96054 7.13418 7.15637 7.46977 7.57040 8.16179 8.49175 8.60046 8.96992 10.02087 Molecular weight = 246.03amu Principal moments of inertia in cm(-1) A = 0.018128 B = 0.011486 C = 0.007133 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1544.237711 B = 2437.110849 C = 3924.540406 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.496 5.496 2 C 0.319 3.681 3 C -0.218 4.218 4 C 0.151 3.849 5 N -0.259 5.259 6 C -0.343 4.343 7 H 0.126 0.874 8 C 0.046 3.954 9 N -0.843 5.843 10 Si 0.941 3.059 11 H -0.260 1.260 12 H -0.271 1.271 13 H -0.272 1.272 14 C 0.055 3.945 15 C -0.058 4.058 16 C -0.085 4.085 17 C -0.143 4.143 18 C -0.127 4.127 19 C -0.009 4.009 20 Cl -0.081 7.081 21 H 0.183 0.817 22 H 0.286 0.714 23 H 0.115 0.885 24 H 0.120 0.880 25 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.131 4.961 0.617 7.164 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.175 5.175 2 C 0.008 3.992 3 C -0.229 4.229 4 C 0.005 3.995 5 N 0.082 4.918 6 C -0.470 4.470 7 H 0.144 0.856 8 C -0.164 4.164 9 N -0.474 5.474 10 Si 0.764 3.236 11 H -0.184 1.184 12 H -0.196 1.196 13 H -0.197 1.197 14 C -0.054 4.054 15 C -0.065 4.065 16 C -0.104 4.104 17 C -0.163 4.163 18 C -0.148 4.148 19 C -0.037 4.037 20 Cl -0.052 7.052 21 H 0.200 0.800 22 H 0.096 0.904 23 H 0.133 0.867 24 H 0.138 0.862 25 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 3.766 4.484 0.608 5.888 hybrid contribution 1.180 -0.747 0.035 1.397 sum 4.947 3.737 0.644 6.233 Atomic orbital electron populations 1.81111 1.12038 1.09201 1.15156 1.24708 0.91426 0.92128 0.90946 1.15504 0.84024 0.94581 1.28818 1.22097 0.81650 0.98305 0.97420 1.40041 1.05571 1.04577 1.41576 1.20465 0.91708 0.88037 1.46823 0.85631 1.25627 0.98789 0.98085 0.93940 1.69801 1.27099 1.15588 1.34897 0.85622 0.79706 0.79296 0.78945 1.18389 1.19572 1.19741 1.17971 0.93132 0.86579 1.07739 1.18476 0.90564 0.92779 1.04671 1.20362 0.98511 0.91549 0.99950 1.20560 0.91483 0.99121 1.05132 1.20459 0.97405 0.92499 1.04389 1.19827 0.83060 0.93083 1.07748 1.98310 1.21198 1.89179 1.96482 0.80010 0.90351 0.86721 0.86195 0.85867 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.50 -10.86 18.54 41.84 0.78 -10.09 15 2 C 0.32 6.81 15.86 -22.47 -0.36 6.46 15 3 C -0.22 -4.73 6.13 -104.84 -0.64 -5.38 15 4 C 0.15 3.44 9.79 -16.37 -0.16 3.28 15 5 N -0.26 -6.04 2.88 -59.46 -0.17 -6.21 15 6 C -0.34 -7.98 9.29 -14.94 -0.14 -8.12 15 7 H 0.13 2.83 5.59 -52.49 -0.29 2.54 15 8 C 0.05 1.04 5.35 -17.49 -0.09 0.95 15 9 N -0.84 -19.78 10.96 55.49 0.61 -19.17 15 10 Si 0.94 17.56 29.56 -169.99 -5.03 12.54 15 11 H -0.26 -4.78 7.11 56.52 0.40 -4.38 15 12 H -0.27 -4.98 7.11 56.52 0.40 -4.58 15 13 H -0.27 -5.09 7.11 56.52 0.40 -4.69 15 14 C 0.05 1.20 6.72 -83.80 -0.56 0.64 15 15 C -0.06 -1.21 6.34 -104.92 -0.67 -1.88 15 16 C -0.08 -1.52 10.09 -39.34 -0.40 -1.91 15 17 C -0.14 -2.26 10.03 -39.55 -0.40 -2.66 15 18 C -0.13 -2.11 9.80 -39.50 -0.39 -2.50 15 19 C -0.01 -0.17 6.33 -39.34 -0.25 -0.42 15 20 Cl -0.08 -1.47 26.09 -51.86 -1.35 -2.83 15 21 H 0.18 4.16 6.49 -52.49 -0.34 3.82 15 22 H 0.29 6.20 8.31 -40.82 -0.34 5.86 15 23 H 0.11 1.85 8.06 -52.49 -0.42 1.43 15 24 H 0.12 1.49 8.06 -52.49 -0.42 1.07 15 25 H 0.12 1.70 8.06 -52.48 -0.42 1.28 15 LS Contribution 249.66 15.07 3.76 3.76 Total: -1.00 -24.71 249.66 -6.49 -31.20 By element: Atomic # 1 Polarization: 3.39 SS G_CDS: -1.04 Total: 2.35 kcal Atomic # 6 Polarization: -7.50 SS G_CDS: -4.05 Total: -11.55 kcal Atomic # 7 Polarization: -36.68 SS G_CDS: 1.21 Total: -35.47 kcal Atomic # 14 Polarization: 17.56 SS G_CDS: -5.03 Total: 12.54 kcal Atomic # 17 Polarization: -1.47 SS G_CDS: -1.35 Total: -2.83 kcal Total LS contribution 3.76 Total: 3.76 kcal Total: -24.71 -6.49 -31.20 kcal The number of atoms in the molecule is 25 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000084872542.mol2 25 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 102.347 kcal (2) G-P(sol) polarization free energy of solvation -24.708 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 77.639 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.490 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.199 kcal (6) G-S(sol) free energy of system = (1) + (5) 71.149 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds