Wall clock time and date at job start Mon Mar 30 2020 05:26:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35781 * 117.00126 * 2 1 4 4 C 1.38741 * 120.19165 * 270.01781 * 3 2 1 5 5 O 1.36048 * 119.92067 * 359.97438 * 4 3 2 6 6 C 1.38712 * 120.16344 * 179.97438 * 4 3 2 7 7 C 1.38830 * 120.55978 * 0.02668 * 6 4 3 8 8 Cl 1.73601 * 119.80878 * 179.97438 * 7 6 4 9 9 C 1.37823 * 120.38753 * 359.71051 * 7 6 4 10 10 F 1.35095 * 120.09200 * 180.27997 * 9 7 6 11 11 C 1.41037 * 119.82107 * 0.54135 * 9 7 6 12 12 C 1.41107 * 120.27414 * 179.73925 * 11 9 7 13 13 H 1.08004 * 120.00379 * 143.83402 * 12 11 9 14 14 C 1.39908 * 120.00006 * 323.83733 * 12 11 9 15 15 N 1.30905 * 119.99524 * 320.89822 * 14 12 11 16 16 Si 1.86793 * 120.00335 * 140.62266 * 14 12 11 17 17 H 1.48498 * 109.47317 * 180.27646 * 16 14 12 18 18 H 1.48507 * 109.46795 * 300.27448 * 16 14 12 19 19 H 1.48495 * 109.47177 * 60.27068 * 16 14 12 20 20 H 1.09003 * 109.47254 * 180.02562 * 1 2 3 21 21 H 1.08996 * 109.47661 * 300.00536 * 1 2 3 22 22 H 1.09008 * 109.46716 * 60.00598 * 1 2 3 23 23 H 0.96697 * 114.00229 * 89.99250 * 5 4 3 24 24 H 1.07996 * 119.72222 * 180.02562 * 6 4 3 25 25 H 0.96994 * 119.99969 * 353.94252 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0455 1.2098 0.0000 4 6 2.3620 1.8316 -1.1992 5 8 2.0543 1.2275 -2.3787 6 6 2.9912 3.0678 -1.1985 7 6 3.3118 3.6960 -0.0027 8 17 4.0999 5.2427 -0.0246 9 6 3.0031 3.1015 1.2018 10 9 3.3127 3.7207 2.3618 11 6 2.3681 1.8423 1.2200 12 6 2.0527 1.2224 2.4478 13 1 1.1441 0.6466 2.5444 14 6 2.9171 1.3536 3.5401 15 7 4.2129 1.3210 3.3569 16 14 2.2223 1.5829 5.2587 17 1 3.3377 1.7027 6.2317 18 1 1.3964 2.8165 5.2981 19 1 1.3803 0.4121 5.6126 20 1 -0.3634 -1.0277 0.0005 21 1 -0.3634 0.5139 0.8899 22 1 -0.3633 0.5138 -0.8901 23 1 1.1781 1.4535 -2.7196 24 1 3.2339 3.5456 -2.1361 25 1 4.5737 1.1185 2.4796 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER ZINC000258314797.mol2 25 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:26:06 Heat of formation + Delta-G solvation = -140.719520 kcal Electronic energy + Delta-G solvation = -16018.930989 eV Core-core repulsion = 12937.296969 eV Total energy + Delta-G solvation = -3081.634020 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 246.025 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -49.37740 -40.82020 -38.24236 -37.87667 -37.01153 -35.45621 -31.51437 -29.85728 -27.89471 -26.80432 -23.41287 -23.03945 -20.49089 -18.81316 -18.72739 -18.13264 -17.07845 -16.52608 -16.19727 -15.92078 -15.72425 -15.33480 -15.10686 -14.74078 -14.17137 -13.80641 -13.56041 -13.14647 -12.94538 -12.62669 -12.31717 -12.02154 -11.85872 -11.74067 -11.58328 -10.90450 -10.49843 -9.78491 -9.38186 -9.20865 -6.62648 0.17098 0.44363 1.09783 1.45467 1.53466 1.75894 2.21529 2.32145 2.79819 3.14318 3.34158 3.70678 4.27201 4.49179 4.53996 4.61598 4.72654 4.92672 4.99023 5.26478 5.42532 5.47577 5.74119 5.84567 6.27999 6.54006 6.65422 7.07931 7.78737 Molecular weight = 246.02amu Principal moments of inertia in cm(-1) A = 0.018505 B = 0.012874 C = 0.008150 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1512.748306 B = 2174.371745 C = 3434.684892 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.333 6.333 3 C -0.036 4.036 4 C 0.132 3.868 5 O -0.494 6.494 6 C -0.234 4.234 7 C -0.016 4.016 8 Cl -0.069 7.069 9 C -0.031 4.031 10 F -0.147 7.147 11 C 0.045 3.955 12 C -0.528 4.528 13 H 0.090 0.910 14 C 0.022 3.978 15 N -0.769 5.769 16 Si 1.101 2.899 17 H -0.270 1.270 18 H -0.265 1.265 19 H -0.248 1.248 20 H 0.107 0.893 21 H 0.032 0.968 22 H 0.052 0.948 23 H 0.402 0.598 24 H 0.148 0.852 25 H 0.280 0.720 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.114 1.781 -4.009 7.525 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.250 6.250 3 C -0.082 4.082 4 C 0.086 3.914 5 O -0.306 6.306 6 C -0.254 4.254 7 C -0.044 4.044 8 Cl -0.040 7.040 9 C -0.052 4.052 10 F -0.126 7.126 11 C 0.041 3.959 12 C -0.553 4.553 13 H 0.108 0.892 14 C -0.201 4.201 15 N -0.387 5.387 16 Si 0.917 3.083 17 H -0.194 1.194 18 H -0.190 1.190 19 H -0.172 1.172 20 H 0.125 0.875 21 H 0.051 0.949 22 H 0.070 0.930 23 H 0.259 0.741 24 H 0.166 0.834 25 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -4.895 1.753 -2.384 5.720 hybrid contribution -0.653 0.373 -1.628 1.793 sum -5.548 2.126 -4.012 7.169 Atomic orbital electron populations 1.23082 0.79730 1.03615 1.00126 1.85979 1.20231 1.24639 1.94118 1.18985 1.09014 0.89514 0.90684 1.18280 0.98622 0.90064 0.84435 1.84776 1.40321 1.70454 1.35024 1.20374 1.12414 0.96457 0.96164 1.20593 1.01491 0.88758 0.93515 1.98291 1.79008 1.27759 1.98941 1.17555 1.13594 0.93953 0.80128 1.91333 1.91711 1.82002 1.47551 1.17887 0.93244 0.90238 0.94536 1.20374 1.09245 1.30225 0.95431 0.89169 1.28372 0.92807 0.89190 1.09715 1.70615 1.14694 1.25600 1.27826 0.83241 0.76596 0.79326 0.69103 1.19406 1.18975 1.17164 0.87479 0.94929 0.92954 0.74059 0.83445 0.90871 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.94 11.03 113.37 1.25 2.19 15 2 O -0.33 -14.75 9.61 -76.94 -0.74 -15.49 15 3 C -0.04 -1.71 5.77 23.11 0.13 -1.58 15 4 C 0.13 5.47 6.70 22.50 0.15 5.62 15 5 O -0.49 -17.09 13.28 -79.94 -1.06 -18.16 15 6 C -0.23 -9.47 9.75 22.52 0.22 -9.25 15 7 C -0.02 -0.70 6.31 22.31 0.14 -0.56 15 8 Cl -0.07 -2.64 28.58 -2.72 -0.08 -2.72 15 9 C -0.03 -1.58 6.78 22.86 0.15 -1.42 15 10 F -0.15 -7.75 14.55 44.97 0.65 -7.09 15 11 C 0.05 2.33 5.04 -21.17 -0.11 2.22 15 12 C -0.53 -27.22 8.29 23.38 0.19 -27.03 15 13 H 0.09 4.52 7.33 -2.91 -0.02 4.50 15 14 C 0.02 1.10 3.79 85.24 0.32 1.42 15 15 N -0.77 -41.16 12.68 21.83 0.28 -40.88 15 16 Si 1.10 42.62 30.06 68.60 2.06 44.69 15 17 H -0.27 -10.31 7.11 99.48 0.71 -9.60 15 18 H -0.26 -9.98 7.11 99.48 0.71 -9.27 15 19 H -0.25 -8.50 7.11 99.48 0.71 -7.79 15 20 H 0.11 2.85 8.14 -2.39 -0.02 2.83 15 21 H 0.03 1.11 7.56 -2.39 -0.02 1.09 15 22 H 0.05 1.44 8.14 -2.38 -0.02 1.42 15 23 H 0.40 9.29 9.06 -74.06 -0.67 8.62 15 24 H 0.15 5.13 8.06 -2.91 -0.02 5.10 15 25 H 0.28 15.75 8.15 -92.71 -0.76 14.99 15 Total: -1.00 -60.31 250.00 4.17 -56.14 By element: Atomic # 1 Polarization: 11.31 SS G_CDS: 0.59 Total: 11.90 kcal Atomic # 6 Polarization: -30.85 SS G_CDS: 2.46 Total: -28.39 kcal Atomic # 7 Polarization: -41.16 SS G_CDS: 0.28 Total: -40.88 kcal Atomic # 8 Polarization: -31.84 SS G_CDS: -1.80 Total: -33.64 kcal Atomic # 9 Polarization: -7.75 SS G_CDS: 0.65 Total: -7.09 kcal Atomic # 14 Polarization: 42.62 SS G_CDS: 2.06 Total: 44.69 kcal Atomic # 17 Polarization: -2.64 SS G_CDS: -0.08 Total: -2.72 kcal Total: -60.31 4.17 -56.14 kcal The number of atoms in the molecule is 25 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000258314797.mol2 25 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.576 kcal (2) G-P(sol) polarization free energy of solvation -60.310 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -144.887 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.167 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -56.143 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.720 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds