Wall clock time and date at job start Mon Mar 30 2020 05:32:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38236 * 119.98155 * 2 1 4 4 C 1.38271 * 120.03673 * 180.02562 * 3 2 1 5 5 Cl 1.73607 * 119.99894 * 179.97438 * 4 3 2 6 6 C 1.38592 * 120.00516 * 359.69473 * 4 3 2 7 7 F 1.35101 * 120.02580 * 180.30154 * 6 4 3 8 8 C 1.38381 * 119.96288 * 0.57428 * 6 4 3 9 9 C 1.50698 * 120.02274 * 179.72383 * 8 6 4 10 10 C 1.50697 * 109.46993 * 269.72884 * 9 8 6 11 11 H 1.07991 * 120.00449 * 359.72131 * 10 9 8 12 12 C 1.37885 * 119.99686 * 179.97438 * 10 9 8 13 13 N 1.31514 * 120.00035 * 179.72339 * 12 10 9 14 14 Si 1.86803 * 119.99853 * 359.72191 * 12 10 9 15 15 H 1.48500 * 109.46986 * 90.00256 * 14 12 10 16 16 H 1.48496 * 109.47029 * 210.00273 * 14 12 10 17 17 H 1.48499 * 109.47352 * 330.00102 * 14 12 10 18 18 C 1.38434 * 119.98332 * 180.02562 * 2 1 3 19 19 F 1.35103 * 120.00113 * 359.97438 * 18 2 1 20 20 H 1.09004 * 109.47523 * 269.98402 * 1 2 3 21 21 H 1.09003 * 109.47417 * 29.98206 * 1 2 3 22 22 H 1.08999 * 109.46902 * 149.98293 * 1 2 3 23 23 H 1.08001 * 119.97661 * 359.97438 * 3 2 1 24 24 H 1.08998 * 109.47083 * 149.72299 * 9 8 6 25 25 H 1.09001 * 109.46875 * 29.72562 * 9 8 6 26 26 H 0.97000 * 119.99706 * 179.97438 * 13 12 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1978 1.1974 0.0000 4 6 3.5805 1.1987 -0.0005 5 17 4.4471 2.7030 -0.0012 6 6 4.2747 -0.0008 0.0053 7 9 5.6257 0.0001 0.0110 8 6 3.5834 -1.1995 -0.0003 9 6 4.3369 -2.5045 -0.0002 10 6 4.5881 -2.9396 -1.4210 11 1 4.2333 -2.3342 -2.2419 12 6 5.2664 -4.1133 -1.6729 13 7 5.4809 -4.4958 -2.9127 14 14 5.8808 -5.1602 -0.2529 15 1 4.8320 -6.1392 0.1302 16 1 7.1079 -5.8861 -0.6679 17 1 6.1908 -4.2873 0.9078 18 6 2.1988 -1.1991 -0.0005 19 9 1.5230 -2.3689 -0.0005 20 1 -0.3634 -0.0003 1.0277 21 1 -0.3634 0.8901 -0.5136 22 1 -0.3633 -0.8898 -0.5141 23 1 1.6571 2.1323 -0.0004 24 1 3.7479 -3.2642 0.5137 25 1 5.2893 -2.3741 0.5136 26 1 5.9585 -5.3213 -3.0899 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER ZINC000260094660.mol2 26 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:32:34 Heat of formation + Delta-G solvation = -103.322440 kcal Electronic energy + Delta-G solvation = -15499.382796 eV Core-core repulsion = 12431.743225 eV Total energy + Delta-G solvation = -3067.639571 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 246.032 amu Computer time = 0.21 seconds Orbital eigenvalues (eV) -50.00936 -49.97680 -40.19571 -37.66155 -35.77847 -34.01486 -32.42531 -29.76283 -27.70431 -25.37559 -23.28972 -22.01614 -19.18791 -19.14735 -18.70115 -17.19192 -17.10267 -16.53113 -16.34516 -16.15276 -15.48677 -15.08216 -14.37684 -14.34670 -14.17439 -13.94789 -13.59041 -13.41228 -13.09602 -12.98762 -12.49869 -12.43751 -12.15430 -11.86049 -11.79160 -11.63398 -10.86107 -9.73920 -9.52247 -8.37558 -6.44367 -0.26702 -0.07591 0.87347 1.31420 1.33512 1.44713 2.16061 2.29097 2.86299 2.95814 3.26914 3.50457 3.64781 3.96319 4.28322 4.49562 4.68044 4.74059 4.82028 4.83677 4.87232 5.10669 5.18180 5.21499 5.41467 5.64095 6.11531 6.58361 7.19008 8.78853 Molecular weight = 246.03amu Principal moments of inertia in cm(-1) A = 0.023572 B = 0.008683 C = 0.006933 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1187.552127 B = 3224.099578 C = 4037.587966 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.108 4.108 2 C -0.106 4.106 3 C -0.059 4.059 4 C -0.078 4.078 5 Cl -0.039 7.039 6 C 0.105 3.895 7 F -0.132 7.132 8 C -0.123 4.123 9 C 0.024 3.976 10 C -0.525 4.525 11 H 0.029 0.971 12 C 0.015 3.985 13 N -0.942 5.942 14 Si 0.945 3.055 15 H -0.260 1.260 16 H -0.276 1.276 17 H -0.249 1.249 18 C 0.109 3.891 19 F -0.132 7.132 20 H 0.097 0.903 21 H 0.105 0.895 22 H 0.065 0.935 23 H 0.193 0.807 24 H 0.039 0.961 25 H 0.036 0.964 26 H 0.270 0.730 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.073 12.680 9.309 18.160 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.164 4.164 2 C -0.107 4.107 3 C -0.077 4.077 4 C -0.106 4.106 5 Cl -0.010 7.010 6 C 0.084 3.916 7 F -0.111 7.111 8 C -0.125 4.125 9 C -0.013 4.013 10 C -0.563 4.563 11 H 0.048 0.952 12 C -0.183 4.183 13 N -0.581 5.581 14 Si 0.768 3.232 15 H -0.185 1.185 16 H -0.202 1.202 17 H -0.173 1.173 18 C 0.089 3.911 19 F -0.110 7.110 20 H 0.115 0.885 21 H 0.123 0.877 22 H 0.084 0.916 23 H 0.210 0.790 24 H 0.057 0.943 25 H 0.054 0.946 26 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges -8.890 12.636 9.197 17.980 hybrid contribution 1.053 -1.024 -0.074 1.471 sum -7.837 11.612 9.122 16.718 Atomic orbital electron populations 1.20843 0.86219 1.04774 1.04578 1.20259 0.99389 0.89610 1.01483 1.20974 0.89517 0.99556 0.97630 1.21025 0.93982 0.85864 1.09726 1.98363 1.76739 1.28972 1.96961 1.17104 0.77356 0.92420 1.04681 1.91482 1.28694 1.97174 1.93713 1.20175 0.93904 0.96174 1.02284 1.18490 0.95694 0.90276 0.96850 1.20969 1.37065 1.07392 0.90888 0.95238 1.25906 0.95224 0.98557 0.98620 1.70029 1.42489 1.24389 1.21234 0.85729 0.78674 0.79129 0.79715 1.18480 1.20169 1.17273 1.17384 0.88177 0.82303 1.03233 1.91465 1.79356 1.46647 1.93580 0.88462 0.87668 0.91642 0.78989 0.94323 0.94620 0.92046 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.92 9.83 71.24 0.70 -1.22 15 2 C -0.11 -2.82 5.89 -19.82 -0.12 -2.94 15 3 C -0.06 -1.39 9.48 22.28 0.21 -1.18 15 4 C -0.08 -2.38 6.32 22.36 0.14 -2.24 15 5 Cl -0.04 -1.04 28.62 -2.72 -0.08 -1.12 15 6 C 0.10 4.11 7.22 22.39 0.16 4.28 15 7 F -0.13 -5.66 16.04 44.97 0.72 -4.94 15 8 C -0.12 -5.29 5.08 -19.78 -0.10 -5.39 15 9 C 0.02 1.20 3.82 29.10 0.11 1.31 15 10 C -0.53 -31.43 9.65 25.60 0.25 -31.18 15 11 H 0.03 1.96 7.98 -2.92 -0.02 1.93 15 12 C 0.02 0.90 5.47 84.66 0.46 1.36 15 13 N -0.94 -59.75 13.96 21.45 0.30 -59.45 15 14 Si 0.95 44.79 27.47 68.60 1.88 46.67 15 15 H -0.26 -11.71 7.11 99.48 0.71 -11.00 15 16 H -0.28 -12.68 7.11 99.48 0.71 -11.97 15 17 H -0.25 -11.11 6.54 99.48 0.65 -10.46 15 18 C 0.11 4.01 7.18 22.37 0.16 4.17 15 19 F -0.13 -5.18 15.68 44.97 0.71 -4.47 15 20 H 0.10 1.36 8.14 -2.38 -0.02 1.34 15 21 H 0.10 1.24 8.09 -2.39 -0.02 1.22 15 22 H 0.06 1.33 7.64 -2.39 -0.02 1.31 15 23 H 0.19 2.75 8.06 -2.91 -0.02 2.73 15 24 H 0.04 1.87 7.08 -2.39 -0.02 1.85 15 25 H 0.04 1.77 6.68 -2.39 -0.02 1.76 15 26 H 0.27 15.87 8.31 -92.71 -0.77 15.10 15 Total: -1.00 -69.20 254.43 6.67 -62.53 By element: Atomic # 1 Polarization: -7.35 SS G_CDS: 1.16 Total: -6.19 kcal Atomic # 6 Polarization: -35.00 SS G_CDS: 1.98 Total: -33.02 kcal Atomic # 7 Polarization: -59.75 SS G_CDS: 0.30 Total: -59.45 kcal Atomic # 9 Polarization: -10.84 SS G_CDS: 1.43 Total: -9.41 kcal Atomic # 14 Polarization: 44.79 SS G_CDS: 1.88 Total: 46.67 kcal Atomic # 17 Polarization: -1.04 SS G_CDS: -0.08 Total: -1.12 kcal Total: -69.20 6.67 -62.53 kcal The number of atoms in the molecule is 26 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260094660.mol2 26 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.795 kcal (2) G-P(sol) polarization free energy of solvation -69.197 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.992 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.669 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -62.527 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.322 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds