Wall clock time and date at job start Mon Mar 30 2020 05:39:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 H 1.09004 * 109.46917 * 2 1 4 4 C 1.50694 * 109.47566 * 239.99734 * 2 1 3 5 5 H 1.07996 * 120.00486 * 240.00693 * 4 2 1 6 6 C 1.37877 * 119.99515 * 59.99894 * 4 2 1 7 7 N 1.31511 * 120.00658 * 0.02562 * 6 4 2 8 8 Si 1.86807 * 119.99624 * 180.02562 * 6 4 2 9 9 H 1.48504 * 109.47040 * 60.00445 * 8 6 4 10 10 H 1.48500 * 109.46774 * 180.02562 * 8 6 4 11 11 H 1.48493 * 109.47136 * 300.00279 * 8 6 4 12 12 C 1.50705 * 109.47015 * 119.99545 * 2 1 3 13 13 C 1.38251 * 119.96924 * 60.27699 * 12 2 1 14 14 C 1.38208 * 120.08141 * 180.27741 * 13 12 2 15 15 C 1.38428 * 120.02158 * 359.72504 * 14 13 12 16 16 F 1.35099 * 120.02815 * 179.97438 * 15 14 13 17 17 C 1.38618 * 119.94601 * 0.02562 * 15 14 13 18 18 F 1.35091 * 120.04408 * 179.97438 * 17 15 14 19 19 C 1.38311 * 119.97183 * 240.00212 * 12 2 1 20 20 Cl 1.73599 * 120.01583 * 359.97438 * 19 12 2 21 21 H 1.09002 * 109.46614 * 60.00015 * 1 2 3 22 22 H 1.08994 * 109.46966 * 179.97438 * 1 2 3 23 23 H 1.09005 * 109.47225 * 300.00149 * 1 2 3 24 24 H 0.96997 * 120.00620 * 179.97438 * 7 6 4 25 25 H 1.08001 * 119.95974 * 0.02562 * 13 12 2 26 26 H 1.08005 * 119.99225 * 179.70668 * 14 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 6 2.0325 -0.7104 -1.2303 5 1 2.6533 -1.5885 -1.1313 6 6 1.6994 -0.2394 -2.4826 7 7 0.9437 0.8301 -2.6034 8 14 2.3216 -1.1204 -4.0078 9 1 1.8260 -2.5203 -4.0076 10 1 1.8272 -0.4200 -5.2203 11 1 3.8065 -1.1210 -4.0079 12 6 2.0324 -0.7103 1.2306 13 6 1.7027 -2.0356 1.4459 14 6 2.1574 -2.6876 2.5765 15 6 2.9486 -2.0158 3.4924 16 9 3.3927 -2.6529 4.5979 17 6 3.2840 -0.6885 3.2749 18 9 4.0556 -0.0309 4.1677 19 6 2.8275 -0.0375 2.1406 20 17 3.2472 1.6243 1.8651 21 1 -0.3632 0.5139 -0.8900 22 1 -0.3633 -1.0276 -0.0005 23 1 -0.3634 0.5139 0.8900 24 1 0.7096 1.1617 -3.4844 25 1 1.0858 -2.5608 0.7318 26 1 1.8950 -3.7216 2.7457 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260768926.mol2 26 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:39:45 Heat of formation + Delta-G solvation = -83.310781 kcal Electronic energy + Delta-G solvation = -15475.194639 eV Core-core repulsion = 12408.422839 eV Total energy + Delta-G solvation = -3066.771800 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 246.032 amu Computer time = 0.19 seconds Orbital eigenvalues (eV) -49.21129 -48.29030 -38.91455 -36.06525 -34.40874 -31.46323 -30.29116 -28.16475 -25.25238 -23.10386 -22.83316 -20.13536 -17.71709 -17.18138 -16.69578 -16.11809 -15.83130 -14.92121 -14.74269 -14.50880 -14.10111 -13.86169 -13.11322 -12.80872 -12.35178 -12.05793 -11.52603 -11.36636 -11.12365 -10.98357 -10.78715 -10.63765 -10.43325 -10.16195 -9.68981 -9.12014 -8.49414 -8.45186 -8.07605 -6.11606 -4.19780 1.18494 1.29788 2.40390 3.25695 3.31166 3.33297 3.69606 4.04192 4.34809 4.60148 4.93456 5.13201 5.20613 5.43767 5.77737 5.98621 6.30319 6.39786 6.57937 6.77497 6.88529 7.01890 7.12553 7.57442 7.78077 7.94407 8.20964 8.81198 9.45292 10.94073 Molecular weight = 246.03amu Principal moments of inertia in cm(-1) A = 0.028489 B = 0.007848 C = 0.006991 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 982.595461 B = 3567.150696 C = 4004.426311 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C 0.063 3.937 3 H 0.057 0.943 4 C -0.514 4.514 5 H 0.059 0.941 6 C 0.067 3.933 7 N -0.885 5.885 8 Si 0.895 3.105 9 H -0.276 1.276 10 H -0.287 1.287 11 H -0.276 1.276 12 C -0.003 4.003 13 C -0.083 4.083 14 C -0.125 4.125 15 C 0.046 3.954 16 F -0.135 7.135 17 C 0.069 3.931 18 F -0.127 7.127 19 C -0.060 4.060 20 Cl -0.039 7.039 21 H 0.090 0.910 22 H 0.030 0.970 23 H 0.011 0.989 24 H 0.263 0.737 25 H 0.150 0.850 26 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.149 -3.658 8.276 9.121 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 C 0.044 3.956 3 H 0.075 0.925 4 C -0.552 4.552 5 H 0.077 0.923 6 C -0.136 4.136 7 N -0.523 5.523 8 Si 0.722 3.278 9 H -0.201 1.201 10 H -0.212 1.212 11 H -0.202 1.202 12 C -0.004 4.004 13 C -0.101 4.101 14 C -0.144 4.144 15 C 0.025 3.975 16 F -0.114 7.114 17 C 0.048 3.952 18 F -0.105 7.105 19 C -0.088 4.088 20 Cl -0.010 7.010 21 H 0.109 0.891 22 H 0.050 0.950 23 H 0.030 0.970 24 H 0.073 0.927 25 H 0.168 0.832 26 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 1.152 -3.373 8.188 8.930 hybrid contribution 0.680 -0.320 -0.461 0.881 sum 1.831 -3.693 7.727 8.758 Atomic orbital electron populations 1.21809 0.96868 0.99556 1.00828 1.18159 0.93352 0.96861 0.87196 0.92495 1.20963 1.32015 1.12705 0.89541 0.92320 1.24915 0.94828 0.94900 0.98916 1.69858 1.36109 1.22534 1.23808 0.86613 0.79333 0.79729 0.82116 1.20144 1.21211 1.20181 1.20716 0.90754 0.93663 0.95235 1.21061 0.99360 0.93737 0.95984 1.21152 0.98123 1.00997 0.94100 1.17317 1.03252 0.89508 0.87389 1.91480 1.88098 1.81315 1.50466 1.17318 0.98084 0.89913 0.89853 1.91496 1.72497 1.80492 1.66059 1.20768 1.03748 0.88463 0.95808 1.98359 1.92022 1.14748 1.95878 0.89113 0.95044 0.96980 0.92670 0.83191 0.83927 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.94 8.79 37.16 0.33 -2.61 15 2 C 0.06 1.44 2.37 -92.92 -0.22 1.22 15 3 H 0.06 1.42 6.16 -51.93 -0.32 1.10 15 4 C -0.51 -12.97 8.23 -34.44 -0.28 -13.25 15 5 H 0.06 1.46 7.59 -52.49 -0.40 1.06 15 6 C 0.07 1.72 5.30 -17.82 -0.09 1.63 15 7 N -0.89 -23.75 11.32 55.43 0.63 -23.12 15 8 Si 0.89 20.15 29.54 -169.99 -5.02 15.13 15 9 H -0.28 -6.10 7.11 56.52 0.40 -5.70 15 10 H -0.29 -6.46 7.11 56.52 0.40 -6.06 15 11 H -0.28 -6.26 7.11 56.52 0.40 -5.85 15 12 C 0.00 -0.05 4.74 -104.59 -0.50 -0.55 15 13 C -0.08 -1.42 8.70 -39.59 -0.34 -1.76 15 14 C -0.12 -1.86 10.02 -39.52 -0.40 -2.25 15 15 C 0.05 0.75 7.31 -39.37 -0.29 0.46 15 16 F -0.13 -2.15 17.18 2.25 0.04 -2.11 15 17 C 0.07 1.24 7.28 -39.33 -0.29 0.95 15 18 F -0.13 -2.26 16.75 2.25 0.04 -2.22 15 19 C -0.06 -1.15 6.32 -39.45 -0.25 -1.40 15 20 Cl -0.04 -0.74 26.66 -51.86 -1.38 -2.12 15 21 H 0.09 2.23 6.07 -51.93 -0.32 1.91 15 22 H 0.03 0.64 7.40 -51.93 -0.38 0.25 15 23 H 0.01 0.23 8.14 -51.93 -0.42 -0.19 15 24 H 0.26 6.79 8.31 -40.82 -0.34 6.45 15 25 H 0.15 2.43 7.58 -52.49 -0.40 2.03 15 26 H 0.14 1.65 8.06 -52.48 -0.42 1.23 15 LS Contribution 251.16 15.07 3.78 3.78 Total: -1.00 -25.95 251.16 -6.04 -31.99 By element: Atomic # 1 Polarization: -1.97 SS G_CDS: -1.80 Total: -3.77 kcal Atomic # 6 Polarization: -15.23 SS G_CDS: -2.33 Total: -17.56 kcal Atomic # 7 Polarization: -23.75 SS G_CDS: 0.63 Total: -23.12 kcal Atomic # 9 Polarization: -4.41 SS G_CDS: 0.08 Total: -4.33 kcal Atomic # 14 Polarization: 20.15 SS G_CDS: -5.02 Total: 15.13 kcal Atomic # 17 Polarization: -0.74 SS G_CDS: -1.38 Total: -2.12 kcal Total LS contribution 3.78 Total: 3.78 kcal Total: -25.95 -6.04 -31.99 kcal The number of atoms in the molecule is 26 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260768926.mol2 26 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.321 kcal (2) G-P(sol) polarization free energy of solvation -25.947 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.268 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.043 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.990 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.311 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.19 seconds