Wall clock time and date at job start Mon Mar 30 2020 06:03:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38451 * 119.86328 * 2 1 4 4 C 1.39192 * 120.48326 * 179.75831 * 3 2 1 5 5 O 1.35932 * 119.89588 * 180.23458 * 4 3 2 6 6 C 1.42895 * 117.00217 * 180.27861 * 5 4 3 7 7 F 1.39905 * 109.47163 * 300.00135 * 6 5 4 8 8 F 1.39896 * 109.47212 * 59.99837 * 6 5 4 9 9 C 1.38031 * 120.20538 * 0.51986 * 4 3 2 10 10 C 1.40632 * 119.72827 * 359.73990 * 9 4 3 11 11 C 1.41287 * 120.23910 * 180.02562 * 10 9 4 12 12 H 1.07993 * 120.00412 * 154.51875 * 11 10 9 13 13 C 1.39936 * 119.99666 * 334.51725 * 11 10 9 14 14 N 1.30850 * 119.99908 * 343.02906 * 13 11 10 15 15 Si 1.86800 * 119.99836 * 163.02587 * 13 11 10 16 16 H 1.48503 * 109.46747 * 90.00376 * 15 13 11 17 17 H 1.48500 * 109.46918 * 209.99824 * 15 13 11 18 18 H 1.48496 * 109.47336 * 329.99965 * 15 13 11 19 19 C 1.37945 * 119.86556 * 180.27130 * 2 1 3 20 20 F 1.35097 * 120.11051 * 0.02562 * 19 2 1 21 21 H 1.09001 * 109.47435 * 269.72388 * 1 2 3 22 22 H 1.09000 * 109.47032 * 149.72190 * 1 2 3 23 23 H 1.09004 * 109.47135 * 29.72862 * 1 2 3 24 24 H 1.07997 * 119.75878 * 359.97438 * 3 2 1 25 25 H 1.09000 * 109.47287 * 180.02562 * 6 5 4 26 26 H 1.08000 * 120.13389 * 179.76662 * 9 4 3 27 27 H 0.96999 * 120.00045 * 179.97438 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1964 1.2007 0.0000 4 6 3.5882 1.2157 0.0051 5 8 4.2529 2.4014 0.0098 6 6 5.6808 2.3448 0.0087 7 9 6.1213 1.6623 1.1477 8 9 6.1199 1.6723 -1.1368 9 6 4.2956 0.0304 -0.0007 10 6 3.6042 -1.1942 -0.0061 11 6 4.3174 -2.4139 -0.0115 12 1 3.8612 -3.3080 0.3869 13 6 5.6150 -2.4633 -0.5331 14 7 6.0473 -1.4986 -1.3043 15 14 6.7300 -3.9063 -0.1282 16 1 6.5476 -4.9732 -1.1450 17 1 8.1448 -3.4551 -0.1326 18 1 6.3840 -4.4377 1.2145 19 6 2.1939 -1.1962 -0.0057 20 9 1.5180 -2.3659 -0.0117 21 1 -0.3634 -0.0050 1.0276 22 1 -0.3633 -0.8875 -0.5181 23 1 -0.3633 0.8924 -0.5096 24 1 1.6503 2.1324 -0.0004 25 1 6.0846 3.3572 0.0133 26 1 5.3755 0.0435 -0.0006 27 1 6.9468 -1.5327 -1.6655 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000575661148.mol2 27 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:03:58 Heat of formation + Delta-G solvation = -185.312643 kcal Electronic energy + Delta-G solvation = -18184.187781 eV Core-core repulsion = 14684.656473 eV Total energy + Delta-G solvation = -3499.531308 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 246.061 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -48.56062 -47.23942 -46.56248 -38.62702 -36.31287 -34.05271 -31.10749 -29.21563 -25.96386 -25.69748 -24.89158 -21.08971 -20.57872 -17.98887 -17.47114 -17.13015 -16.68368 -16.02200 -15.18250 -14.97729 -14.27005 -14.22235 -13.57448 -13.06477 -13.02782 -12.84618 -12.58773 -12.57142 -12.42860 -12.19189 -11.75447 -11.64987 -11.56133 -11.19359 -10.86016 -10.64380 -10.20123 -9.95021 -9.51937 -9.19632 -7.58094 -7.06433 -6.80417 -4.50622 2.60178 2.64332 3.03391 3.06018 3.12809 3.38963 3.86687 4.17335 4.42151 4.96142 5.24627 5.42831 5.78315 5.85804 6.05988 6.23740 6.33143 6.49434 6.50354 6.77653 7.02937 7.11074 7.42879 7.60349 7.80219 7.89693 8.04991 8.44355 8.66005 8.74940 10.05755 Molecular weight = 246.06amu Principal moments of inertia in cm(-1) A = 0.016235 B = 0.013386 C = 0.007859 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1724.292586 B = 2091.310207 C = 3562.068988 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.101 4.101 2 C -0.069 4.069 3 C -0.234 4.234 4 C 0.106 3.894 5 O -0.336 6.336 6 C 0.411 3.589 7 F -0.205 7.205 8 F -0.189 7.189 9 C -0.223 4.223 10 C 0.111 3.889 11 C -0.448 4.448 12 H 0.085 0.915 13 C 0.075 3.925 14 N -0.773 5.773 15 Si 0.912 3.088 16 H -0.267 1.267 17 H -0.274 1.274 18 H -0.259 1.259 19 C -0.042 4.042 20 F -0.160 7.160 21 H 0.060 0.940 22 H 0.060 0.940 23 H 0.058 0.942 24 H 0.107 0.893 25 H 0.162 0.838 26 H 0.146 0.854 27 H 0.285 0.715 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.584 5.500 1.482 5.726 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C -0.070 4.070 3 C -0.254 4.254 4 C 0.064 3.936 5 O -0.254 6.254 6 C 0.321 3.679 7 F -0.187 7.187 8 F -0.170 7.170 9 C -0.243 4.243 10 C 0.107 3.893 11 C -0.476 4.476 12 H 0.104 0.896 13 C -0.146 4.146 14 N -0.396 5.396 15 Si 0.736 3.264 16 H -0.192 1.192 17 H -0.199 1.199 18 H -0.182 1.182 19 C -0.062 4.062 20 F -0.139 7.139 21 H 0.079 0.921 22 H 0.079 0.921 23 H 0.077 0.923 24 H 0.125 0.875 25 H 0.179 0.821 26 H 0.163 0.837 27 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 0.709 5.672 1.325 5.868 hybrid contribution 0.755 -0.979 0.042 1.237 sum 1.464 4.694 1.367 5.103 Atomic orbital electron populations 1.20566 0.92197 1.01728 1.01301 1.19061 0.94663 0.91586 1.01664 1.19217 0.89816 0.96217 1.20152 1.18716 0.91489 0.82928 1.00472 1.86420 1.17627 1.32000 1.89374 1.23007 0.80172 0.92259 0.72501 1.93065 1.89470 1.83498 1.52637 1.93154 1.89263 1.83520 1.51107 1.21578 1.00964 0.89854 1.11869 1.17330 0.88799 0.93921 0.89205 1.19516 0.98055 0.95753 1.34313 0.89646 1.25978 0.98339 0.97665 0.92593 1.69825 1.18141 1.31107 1.20555 0.86233 0.78797 0.80967 0.80396 1.19234 1.19873 1.18232 1.17638 0.90056 0.79748 1.18744 1.91249 1.80149 1.47224 1.95321 0.92144 0.92126 0.92301 0.87498 0.82113 0.83671 0.90432 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.84 9.83 36.01 0.35 -1.49 15 2 C -0.07 -1.58 5.88 -104.65 -0.61 -2.19 15 3 C -0.23 -5.34 9.63 -39.15 -0.38 -5.72 15 4 C 0.11 2.55 6.48 -39.30 -0.25 2.30 15 5 O -0.34 -6.93 10.43 -19.53 -0.20 -7.13 15 6 C 0.41 7.23 5.98 101.05 0.60 7.83 15 7 F -0.20 -4.01 15.57 2.25 0.04 -3.98 15 8 F -0.19 -3.87 15.57 2.25 0.04 -3.83 15 9 C -0.22 -5.86 6.88 -38.75 -0.27 -6.13 15 10 C 0.11 3.06 5.57 -106.78 -0.59 2.46 15 11 C -0.45 -12.20 8.77 -37.79 -0.33 -12.53 15 12 H 0.09 2.28 7.74 -52.49 -0.41 1.87 15 13 C 0.07 1.89 5.15 -17.33 -0.09 1.80 15 14 N -0.77 -19.93 10.97 55.55 0.61 -19.32 15 15 Si 0.91 18.81 29.59 -169.99 -5.03 13.78 15 16 H -0.27 -5.41 7.11 56.52 0.40 -5.01 15 17 H -0.27 -5.46 7.11 56.52 0.40 -5.06 15 18 H -0.26 -5.31 7.11 56.52 0.40 -4.91 15 19 C -0.04 -1.08 7.24 -38.63 -0.28 -1.36 15 20 F -0.16 -4.07 15.91 2.25 0.04 -4.03 15 21 H 0.06 1.00 8.14 -51.93 -0.42 0.58 15 22 H 0.06 1.08 7.62 -51.93 -0.40 0.69 15 23 H 0.06 0.93 8.08 -51.93 -0.42 0.51 15 24 H 0.11 2.16 8.06 -52.49 -0.42 1.73 15 25 H 0.16 1.78 8.14 -51.93 -0.42 1.36 15 26 H 0.15 3.85 3.21 -52.49 -0.17 3.68 15 27 H 0.28 6.68 8.30 -40.82 -0.34 6.34 15 LS Contribution 250.08 15.07 3.77 3.77 Total: -1.00 -29.60 250.08 -4.39 -33.99 By element: Atomic # 1 Polarization: 3.58 SS G_CDS: -1.79 Total: 1.79 kcal Atomic # 6 Polarization: -13.18 SS G_CDS: -1.85 Total: -15.03 kcal Atomic # 7 Polarization: -19.93 SS G_CDS: 0.61 Total: -19.32 kcal Atomic # 8 Polarization: -6.93 SS G_CDS: -0.20 Total: -7.13 kcal Atomic # 9 Polarization: -11.95 SS G_CDS: 0.11 Total: -11.84 kcal Atomic # 14 Polarization: 18.81 SS G_CDS: -5.03 Total: 13.78 kcal Total LS contribution 3.77 Total: 3.77 kcal Total: -29.60 -4.39 -33.99 kcal The number of atoms in the molecule is 27 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000575661148.mol2 27 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -151.322 kcal (2) G-P(sol) polarization free energy of solvation -29.596 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -180.919 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.394 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.990 kcal (6) G-S(sol) free energy of system = (1) + (5) -185.313 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds