Wall clock time and date at job start Mon Mar 30 2020 05:47:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 N 1.29912 * 126.30088 * 2 1 4 4 O 1.41442 * 109.69071 * 180.02562 * 3 2 1 5 5 C 1.34384 * 109.30064 * 359.97438 * 4 3 2 6 6 C 1.39329 * 134.56453 * 180.02562 * 5 4 3 7 7 C 1.36684 * 119.19446 * 179.97438 * 6 5 4 8 8 N 1.32282 * 121.70948 * 359.74379 * 7 6 5 9 9 C 1.32365 * 122.08200 * 0.52508 * 8 7 6 10 10 N 1.38494 * 120.08354 * 179.75503 * 9 8 7 11 11 C 1.46494 * 119.99953 * 359.72869 * 10 9 8 12 12 H 1.09004 * 109.47402 * 34.99895 * 11 10 9 13 13 C 1.53004 * 109.47073 * 275.00059 * 11 10 9 14 14 C 1.50699 * 109.47151 * 155.00152 * 11 10 9 15 15 H 1.07991 * 120.00204 * 95.27298 * 14 11 10 16 16 C 1.37878 * 119.99854 * 275.27305 * 14 11 10 17 17 N 1.31518 * 119.99706 * 5.45665 * 16 14 11 18 18 Si 1.86797 * 120.00374 * 185.45757 * 16 14 11 19 19 H 1.48492 * 109.47253 * 270.00529 * 18 16 14 20 20 H 1.48500 * 109.46749 * 30.00039 * 18 16 14 21 21 H 1.48498 * 109.47326 * 149.99825 * 18 16 14 22 22 C 1.40331 * 119.83199 * 359.48464 * 9 8 7 23 23 H 1.09001 * 109.46685 * 269.99696 * 1 2 3 24 24 H 1.09001 * 109.47015 * 29.99290 * 1 2 3 25 25 H 1.08999 * 109.47405 * 149.99801 * 1 2 3 26 26 H 1.08007 * 120.40412 * 359.97438 * 6 5 4 27 27 H 1.07999 * 119.14523 * 179.97438 * 7 6 5 28 28 H 0.97000 * 119.99811 * 179.72345 * 10 9 8 29 29 H 1.09000 * 109.46661 * 295.06219 * 13 11 10 30 30 H 1.08998 * 109.47207 * 55.06370 * 13 11 10 31 31 H 1.09000 * 109.47134 * 175.06243 * 13 11 10 32 32 H 0.97000 * 120.00469 * 355.06270 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2761 1.0470 0.0000 4 8 3.6315 0.6427 -0.0006 5 6 3.6946 -0.6997 -0.0004 6 6 4.7321 -1.6297 -0.0003 7 6 4.4320 -2.9632 0.0004 8 7 3.1815 -3.3946 0.0061 9 6 2.1512 -2.5636 0.0011 10 7 0.8585 -3.0606 0.0022 11 6 0.6301 -4.5076 0.0030 12 1 1.4054 -4.9976 0.5921 13 6 0.6738 -5.0316 -1.4339 14 6 -0.7197 -4.8028 0.6045 15 1 -1.5797 -4.9316 -0.0358 16 6 -0.8567 -4.9083 1.9724 17 7 0.1652 -4.6462 2.7577 18 14 -2.4935 -5.4237 2.7103 19 1 -3.3210 -4.2183 2.9698 20 1 -3.2048 -6.3173 1.7612 21 1 -2.2561 -6.1454 3.9862 22 6 2.3720 -1.1778 0.0003 23 1 -0.3633 -0.0001 1.0277 24 1 -0.3633 0.8901 -0.5137 25 1 -0.3634 -0.8899 -0.5138 26 1 5.7609 -1.3010 -0.0008 27 1 5.2368 -3.6834 0.0001 28 1 0.1044 -2.4505 0.0026 29 1 -0.1556 -4.6080 -2.0003 30 1 1.6164 -4.7415 -1.8979 31 1 0.5915 -6.1184 -1.4270 32 1 1.0338 -4.4485 2.3738 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260208079.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:47:49 Heat of formation + Delta-G solvation = 62.806568 kcal Electronic energy + Delta-G solvation = -17846.224979 eV Core-core repulsion = 15002.009602 eV Total energy + Delta-G solvation = -2844.215377 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 247.106 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -41.55304 -38.60894 -36.08895 -34.35636 -32.61904 -30.82693 -30.39372 -28.73119 -27.88108 -24.82678 -23.31005 -22.88776 -20.89327 -20.06179 -17.83321 -17.48500 -16.71636 -15.87573 -15.80679 -15.05529 -14.10987 -13.91134 -13.70522 -13.43017 -13.34923 -13.25841 -13.09086 -12.80051 -12.06404 -11.67176 -11.30515 -11.17304 -11.10517 -10.92862 -10.72934 -10.33998 -10.23583 -9.33677 -9.12112 -9.05206 -8.80288 -8.70239 -7.07155 -6.66848 -4.49671 1.07846 1.82698 2.32559 2.78759 3.26502 3.31375 3.47644 3.88747 4.24620 4.29557 4.31693 4.48593 4.92604 5.06639 5.23250 5.41240 5.45864 5.53628 5.64079 5.78482 5.99264 6.22427 6.26834 6.29910 6.44467 6.49188 6.71096 6.96443 7.11212 7.48496 7.61725 7.95492 8.14457 8.25041 8.54827 8.83045 9.31579 10.70561 Molecular weight = 247.11amu Principal moments of inertia in cm(-1) A = 0.025452 B = 0.007436 C = 0.006596 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1099.838860 B = 3764.493111 C = 4243.728195 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 C 0.160 3.840 3 N -0.321 5.321 4 O -0.102 6.102 5 C 0.165 3.835 6 C -0.279 4.279 7 C 0.208 3.792 8 N -0.563 5.563 9 C 0.486 3.514 10 N -0.669 5.669 11 C 0.236 3.764 12 H 0.062 0.938 13 C -0.139 4.139 14 C -0.611 4.611 15 H 0.058 0.942 16 C 0.032 3.968 17 N -0.884 5.884 18 Si 1.071 2.929 19 H -0.286 1.286 20 H -0.285 1.285 21 H -0.282 1.282 22 C -0.334 4.334 23 H 0.098 0.902 24 H 0.087 0.913 25 H 0.088 0.912 26 H 0.135 0.865 27 H 0.162 0.838 28 H 0.394 0.606 29 H 0.037 0.963 30 H 0.034 0.966 31 H 0.052 0.948 32 H 0.279 0.721 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.692 4.382 -5.189 7.306 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.019 4.019 3 N -0.071 5.071 4 O -0.106 6.106 5 C 0.103 3.897 6 C -0.306 4.306 7 C 0.049 3.951 8 N -0.286 5.286 9 C 0.239 3.761 10 N -0.294 5.294 11 C 0.137 3.863 12 H 0.080 0.920 13 C -0.197 4.197 14 C -0.650 4.650 15 H 0.076 0.924 16 C -0.178 4.178 17 N -0.517 5.517 18 Si 0.898 3.102 19 H -0.212 1.212 20 H -0.211 1.211 21 H -0.207 1.207 22 C -0.346 4.346 23 H 0.117 0.883 24 H 0.106 0.894 25 H 0.107 0.893 26 H 0.153 0.847 27 H 0.179 0.821 28 H 0.233 0.767 29 H 0.057 0.943 30 H 0.053 0.947 31 H 0.072 0.928 32 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 1.796 4.375 -3.749 6.035 hybrid contribution 0.778 0.693 -1.403 1.748 sum 2.574 5.067 -5.153 7.672 Atomic orbital electron populations 1.20546 0.85053 1.04428 1.04883 1.24268 0.97641 0.89710 0.90251 1.79899 0.84574 1.17624 1.24971 1.88987 1.23495 1.17375 1.80746 1.20213 0.94709 0.84639 0.90114 1.20268 0.97643 0.91490 1.21163 1.22096 0.93120 0.92632 0.87238 1.67552 0.98391 1.36945 1.25676 1.18448 0.88479 0.84988 0.84175 1.47420 1.01234 1.10880 1.69887 1.19081 0.97929 0.76355 0.92982 0.92013 1.21998 0.98979 1.00396 0.98368 1.22190 0.94552 1.53652 0.94572 0.92371 1.26061 1.04716 0.92918 0.94106 1.70726 1.02177 1.39813 1.38957 0.83514 0.73810 0.76884 0.75982 1.21232 1.21063 1.20725 1.20957 0.92391 0.94658 1.26643 0.88333 0.89384 0.89326 0.84730 0.82077 0.76682 0.94337 0.94726 0.92847 0.90937 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -1.23 9.84 36.01 0.35 -0.88 16 2 C 0.16 2.81 7.45 -80.24 -0.60 2.21 16 3 N -0.32 -5.95 12.82 34.84 0.45 -5.50 16 4 O -0.10 -1.95 12.05 8.86 0.11 -1.84 16 5 C 0.16 3.07 7.56 -38.27 -0.29 2.78 16 6 C -0.28 -4.44 10.08 -39.74 -0.40 -4.84 16 7 C 0.21 3.36 11.08 -17.92 -0.20 3.16 16 8 N -0.56 -11.21 9.20 -12.53 -0.12 -11.33 16 9 C 0.49 9.98 7.50 -155.09 -1.16 8.82 16 10 N -0.67 -14.12 5.20 -54.87 -0.29 -14.41 16 11 C 0.24 5.44 2.14 -69.08 -0.15 5.30 16 12 H 0.06 1.60 6.35 -51.93 -0.33 1.27 16 13 C -0.14 -2.83 9.48 37.16 0.35 -2.47 16 14 C -0.61 -15.29 8.50 -34.44 -0.29 -15.58 16 15 H 0.06 1.44 7.81 -52.49 -0.41 1.03 16 16 C 0.03 0.83 5.45 -17.82 -0.10 0.73 16 17 N -0.88 -24.74 13.63 55.43 0.76 -23.98 16 18 Si 1.07 22.89 29.91 -169.99 -5.08 17.81 16 19 H -0.29 -5.89 7.11 56.52 0.40 -5.49 16 20 H -0.28 -5.80 7.11 56.52 0.40 -5.40 16 21 H -0.28 -6.12 7.11 56.52 0.40 -5.72 16 22 C -0.33 -6.48 6.28 -105.04 -0.66 -7.14 16 23 H 0.10 1.27 8.14 -51.93 -0.42 0.85 16 24 H 0.09 0.97 8.14 -51.93 -0.42 0.55 16 25 H 0.09 1.17 6.00 -51.93 -0.31 0.86 16 26 H 0.13 1.72 8.06 -52.48 -0.42 1.30 16 27 H 0.16 1.94 8.06 -52.49 -0.42 1.52 16 28 H 0.39 7.80 5.59 -40.82 -0.23 7.57 16 29 H 0.04 0.74 8.14 -51.93 -0.42 0.32 16 30 H 0.03 0.67 8.14 -51.93 -0.42 0.25 16 31 H 0.05 1.05 8.14 -51.93 -0.42 0.63 16 32 H 0.28 7.97 6.78 -40.82 -0.28 7.69 16 LS Contribution 278.84 15.07 4.20 4.20 Total: -1.00 -29.30 278.84 -6.42 -35.73 By element: Atomic # 1 Polarization: 10.54 SS G_CDS: -3.31 Total: 7.23 kcal Atomic # 6 Polarization: -4.77 SS G_CDS: -3.14 Total: -7.91 kcal Atomic # 7 Polarization: -56.02 SS G_CDS: 0.80 Total: -55.22 kcal Atomic # 8 Polarization: -1.95 SS G_CDS: 0.11 Total: -1.84 kcal Atomic # 14 Polarization: 22.89 SS G_CDS: -5.08 Total: 17.81 kcal Total LS contribution 4.20 Total: 4.20 kcal Total: -29.30 -6.42 -35.73 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260208079.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 98.536 kcal (2) G-P(sol) polarization free energy of solvation -29.305 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 69.231 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.425 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.729 kcal (6) G-S(sol) free energy of system = (1) + (5) 62.807 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds