Wall clock time and date at job start Mon Mar 30 2020 05:47:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 N 1.29924 * 126.29682 * 2 1 4 4 O 1.41434 * 109.69035 * 179.97438 * 3 2 1 5 5 C 1.34387 * 109.30100 * 359.97438 * 4 3 2 6 6 C 1.39334 * 134.55873 * 179.97438 * 5 4 3 7 7 C 1.36682 * 119.19049 * 180.02562 * 6 5 4 8 8 N 1.32283 * 121.70945 * 0.04460 * 7 6 5 9 9 C 1.32372 * 122.08722 * 359.97113 * 8 7 6 10 10 N 1.38491 * 120.08572 * 179.97438 * 9 8 7 11 11 C 1.46500 * 119.99689 * 0.02562 * 10 9 8 12 12 H 1.08992 * 109.47359 * 325.00072 * 11 10 9 13 13 C 1.53004 * 109.46850 * 85.00214 * 11 10 9 14 14 C 1.50702 * 109.46882 * 204.99905 * 11 10 9 15 15 H 1.07996 * 120.00132 * 0.02562 * 14 11 10 16 16 C 1.37879 * 119.99859 * 180.02562 * 14 11 10 17 17 N 1.31514 * 120.00046 * 0.02562 * 16 14 11 18 18 Si 1.86801 * 120.00041 * 179.97438 * 16 14 11 19 19 H 1.48496 * 109.46928 * 59.99988 * 18 16 14 20 20 H 1.48500 * 109.47400 * 180.02562 * 18 16 14 21 21 H 1.48504 * 109.47196 * 300.00461 * 18 16 14 22 22 C 1.40329 * 119.82836 * 0.02562 * 9 8 7 23 23 H 1.09000 * 109.46980 * 90.03002 * 1 2 3 24 24 H 1.09001 * 109.47175 * 210.02487 * 1 2 3 25 25 H 1.08996 * 109.47371 * 330.03127 * 1 2 3 26 26 H 1.07990 * 120.40479 * 0.05040 * 6 5 4 27 27 H 1.07996 * 119.14557 * 180.02562 * 7 6 5 28 28 H 0.96997 * 120.00208 * 180.02562 * 10 9 8 29 29 H 1.09000 * 109.46967 * 59.99838 * 13 11 10 30 30 H 1.08999 * 109.46882 * 179.97438 * 13 11 10 31 31 H 1.08993 * 109.47011 * 299.99443 * 13 11 10 32 32 H 0.96999 * 119.99782 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2761 1.0471 0.0000 4 8 3.6314 0.6429 0.0006 5 6 3.6946 -0.6995 0.0015 6 6 4.7323 -1.6293 0.0020 7 6 4.4324 -2.9628 0.0025 8 7 3.1819 -3.3943 0.0016 9 6 2.1514 -2.5635 0.0009 10 7 0.8588 -3.0606 -0.0005 11 6 0.6306 -4.5077 -0.0005 12 1 1.4062 -4.9978 -0.5890 13 6 0.6737 -5.0308 1.4367 14 6 -0.7190 -4.8034 -0.6025 15 1 -1.3440 -3.9944 -0.9505 16 6 -1.1558 -6.1069 -0.7088 17 7 -0.3949 -7.0921 -0.2844 18 14 -2.8289 -6.4734 -1.4542 19 1 -2.8711 -5.9660 -2.8491 20 1 -3.0607 -7.9402 -1.4533 21 1 -3.8852 -5.8052 -0.6523 22 6 2.3721 -1.1776 0.0004 23 1 -0.3633 -0.0005 -1.0277 24 1 -0.3633 -0.8898 0.5142 25 1 -0.3634 0.8902 0.5133 26 1 5.7609 -1.3004 0.0023 27 1 5.2372 -3.6829 0.0032 28 1 0.1046 -2.4507 -0.0014 29 1 -0.1019 -4.5407 2.0251 30 1 0.5035 -6.1074 1.4367 31 1 1.6498 -4.8170 1.8720 32 1 -0.7023 -8.0090 -0.3589 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260208086.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:47:52 Heat of formation + Delta-G solvation = 71.761383 kcal Electronic energy + Delta-G solvation = -17598.491340 eV Core-core repulsion = 14754.664273 eV Total energy + Delta-G solvation = -2843.827067 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 247.106 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -41.64980 -38.68711 -36.03086 -34.39194 -32.79683 -30.91858 -30.15076 -28.78082 -27.73388 -25.33810 -23.38761 -22.95424 -20.71806 -20.06952 -17.87369 -17.42298 -16.44025 -15.95147 -15.82028 -15.13212 -14.73387 -13.89665 -13.62562 -13.46488 -13.42168 -13.14684 -12.93466 -12.54499 -11.93428 -11.73355 -11.26376 -11.22080 -11.09581 -10.87311 -10.65433 -10.40143 -10.30304 -9.50154 -9.17307 -9.13749 -9.04635 -8.55461 -7.18213 -6.21566 -4.31616 0.98546 1.73356 2.23271 2.69625 3.19727 3.25652 3.26194 3.78580 4.15999 4.21099 4.28615 4.38889 4.85450 5.03717 5.11207 5.32549 5.35746 5.43095 5.51851 5.70628 5.90794 6.14408 6.21512 6.59002 6.73912 6.93738 7.03426 7.27427 7.43010 7.54993 7.65404 7.83761 8.07082 8.24489 8.59730 8.83003 9.35397 10.84104 Molecular weight = 247.11amu Principal moments of inertia in cm(-1) A = 0.030459 B = 0.006410 C = 0.005550 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 919.060697 B = 4367.324163 C = 5044.048171 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 C 0.159 3.841 3 N -0.318 5.318 4 O -0.101 6.101 5 C 0.165 3.835 6 C -0.275 4.275 7 C 0.209 3.791 8 N -0.555 5.555 9 C 0.493 3.507 10 N -0.677 5.677 11 C 0.266 3.734 12 H 0.059 0.941 13 C -0.146 4.146 14 C -0.541 4.541 15 H 0.060 0.940 16 C 0.070 3.930 17 N -0.881 5.881 18 Si 0.901 3.099 19 H -0.276 1.276 20 H -0.285 1.285 21 H -0.276 1.276 22 C -0.334 4.334 23 H 0.098 0.902 24 H 0.089 0.911 25 H 0.089 0.911 26 H 0.137 0.863 27 H 0.165 0.835 28 H 0.398 0.602 29 H 0.024 0.976 30 H 0.092 0.908 31 H 0.017 0.983 32 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.037 8.513 1.067 9.482 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.020 4.020 3 N -0.068 5.068 4 O -0.105 6.105 5 C 0.103 3.897 6 C -0.301 4.301 7 C 0.050 3.950 8 N -0.277 5.277 9 C 0.245 3.755 10 N -0.300 5.300 11 C 0.165 3.835 12 H 0.077 0.923 13 C -0.205 4.205 14 C -0.579 4.579 15 H 0.078 0.922 16 C -0.134 4.134 17 N -0.518 5.518 18 Si 0.729 3.271 19 H -0.201 1.201 20 H -0.210 1.210 21 H -0.201 1.201 22 C -0.346 4.346 23 H 0.116 0.884 24 H 0.108 0.892 25 H 0.108 0.892 26 H 0.154 0.846 27 H 0.182 0.818 28 H 0.236 0.764 29 H 0.043 0.957 30 H 0.111 0.889 31 H 0.037 0.963 32 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges 3.926 8.531 1.084 9.454 hybrid contribution -0.968 0.109 -0.366 1.040 sum 2.959 8.640 0.718 9.161 Atomic orbital electron populations 1.20560 0.85030 1.04693 1.04762 1.24272 0.97641 0.89663 0.90463 1.79915 0.84615 1.17633 1.24626 1.89001 1.23411 1.17338 1.80740 1.20201 0.94620 0.84650 0.90188 1.20328 0.97763 0.91477 1.20568 1.22153 0.93094 0.92644 0.87071 1.67605 0.98382 1.36796 1.24954 1.18127 0.87868 0.84909 0.84547 1.45900 1.01706 1.11150 1.71232 1.18930 0.97382 0.72921 0.94284 0.92315 1.22094 0.96821 1.04475 0.97125 1.21158 1.01934 0.92876 1.41971 0.92212 1.24845 0.97656 0.95883 0.95003 1.69877 1.36832 0.99642 1.45423 0.86507 0.83527 0.77387 0.79706 1.20130 1.21016 1.20116 1.20914 0.92526 0.94432 1.26726 0.88395 0.89237 0.89235 0.84557 0.81818 0.76448 0.95687 0.88947 0.96346 0.92390 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -1.08 9.84 36.00 0.35 -0.72 16 2 C 0.16 2.52 7.45 -80.24 -0.60 1.92 16 3 N -0.32 -5.44 12.82 34.83 0.45 -5.00 16 4 O -0.10 -1.79 12.05 8.85 0.11 -1.68 16 5 C 0.16 2.84 7.56 -38.27 -0.29 2.55 16 6 C -0.28 -4.05 10.08 -39.74 -0.40 -4.45 16 7 C 0.21 3.19 11.08 -17.92 -0.20 2.99 16 8 N -0.56 -10.70 9.20 -12.53 -0.12 -10.82 16 9 C 0.49 9.54 7.50 -155.09 -1.16 8.37 16 10 N -0.68 -13.57 5.20 -54.87 -0.29 -13.86 16 11 C 0.27 6.33 2.58 -69.08 -0.18 6.15 16 12 H 0.06 1.57 7.54 -51.93 -0.39 1.18 16 13 C -0.15 -3.42 9.27 37.16 0.34 -3.08 16 14 C -0.54 -13.67 8.73 -34.44 -0.30 -13.97 16 15 H 0.06 1.44 7.74 -52.49 -0.41 1.04 16 16 C 0.07 1.80 5.30 -17.82 -0.09 1.71 16 17 N -0.88 -23.66 11.32 55.43 0.63 -23.03 16 18 Si 0.90 19.89 29.54 -169.99 -5.02 14.86 16 19 H -0.28 -6.07 7.11 56.52 0.40 -5.66 16 20 H -0.28 -6.28 7.11 56.52 0.40 -5.88 16 21 H -0.28 -5.98 7.11 56.52 0.40 -5.58 16 22 C -0.33 -5.94 6.28 -105.04 -0.66 -6.60 16 23 H 0.10 1.00 8.14 -51.93 -0.42 0.58 16 24 H 0.09 1.03 6.00 -51.93 -0.31 0.72 16 25 H 0.09 0.86 8.14 -51.93 -0.42 0.44 16 26 H 0.14 1.59 8.06 -52.49 -0.42 1.16 16 27 H 0.16 1.86 8.06 -52.49 -0.42 1.44 16 28 H 0.40 7.08 5.53 -40.82 -0.23 6.85 16 29 H 0.02 0.55 8.14 -51.93 -0.42 0.13 16 30 H 0.09 2.36 6.07 -51.93 -0.32 2.04 16 31 H 0.02 0.40 8.14 -51.93 -0.42 -0.02 16 32 H 0.27 6.82 8.31 -40.82 -0.34 6.48 16 LS Contribution 277.00 15.07 4.17 4.17 Total: -1.00 -29.00 277.00 -6.57 -35.57 By element: Atomic # 1 Polarization: 8.24 SS G_CDS: -3.32 Total: 4.91 kcal Atomic # 6 Polarization: -1.95 SS G_CDS: -3.18 Total: -5.14 kcal Atomic # 7 Polarization: -53.38 SS G_CDS: 0.67 Total: -52.71 kcal Atomic # 8 Polarization: -1.79 SS G_CDS: 0.11 Total: -1.68 kcal Atomic # 14 Polarization: 19.89 SS G_CDS: -5.02 Total: 14.86 kcal Total LS contribution 4.17 Total: 4.17 kcal Total: -29.00 -6.57 -35.57 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260208086.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 107.335 kcal (2) G-P(sol) polarization free energy of solvation -29.003 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 78.333 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.571 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.574 kcal (6) G-S(sol) free energy of system = (1) + (5) 71.761 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds