Wall clock time and date at job start Mon Mar 30 2020 05:41:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 N 1.46497 * 109.47118 * 2 1 4 4 O 1.20962 * 123.60578 * 269.97797 * 3 2 1 5 5 C 1.34380 * 112.71073 * 180.02562 * 4 3 2 6 6 O 1.21743 * 127.34613 * 179.97438 * 5 4 3 7 7 C 1.46818 * 105.31262 * 359.97438 * 5 4 3 8 8 C 1.38892 * 136.32461 * 179.97438 * 7 5 4 9 9 C 1.36858 * 119.57666 * 180.02562 * 8 7 5 10 10 C 1.38851 * 120.47880 * 0.02562 * 9 8 7 11 11 C 1.37806 * 120.83797 * 359.97438 * 10 9 8 12 12 C 1.50703 * 120.16386 * 179.97438 * 11 10 9 13 13 C 1.50701 * 109.47064 * 264.99625 * 12 11 10 14 14 H 1.07998 * 120.00129 * 0.02562 * 13 12 11 15 15 C 1.37880 * 119.99861 * 179.97438 * 13 12 11 16 16 N 1.31510 * 119.99913 * 0.02562 * 15 13 12 17 17 Si 1.86797 * 119.99734 * 180.02562 * 15 13 12 18 18 H 1.48506 * 109.47294 * 60.00559 * 17 15 13 19 19 H 1.48503 * 109.46954 * 180.02562 * 17 15 13 20 20 H 1.48503 * 109.47431 * 300.00157 * 17 15 13 21 21 C 1.36907 * 123.60166 * 90.27599 * 3 2 1 22 22 H 1.09000 * 109.46740 * 299.99162 * 1 2 3 23 23 H 1.08992 * 109.47108 * 59.99665 * 1 2 3 24 24 H 1.09004 * 109.46858 * 179.97438 * 1 2 3 25 25 H 1.09004 * 109.46824 * 240.00324 * 2 1 3 26 26 H 1.08995 * 109.47573 * 120.00924 * 2 1 3 27 27 H 1.07999 * 120.21425 * 359.97438 * 8 7 5 28 28 H 1.07998 * 119.76050 * 179.97438 * 9 8 7 29 29 H 1.08003 * 119.57755 * 179.97438 * 10 9 8 30 30 H 1.09002 * 109.47152 * 144.99718 * 12 11 10 31 31 H 1.09001 * 109.46980 * 24.99819 * 12 11 10 32 32 H 0.97002 * 119.99768 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 8 2.2418 2.0123 -1.0075 5 6 2.6821 3.2562 -0.7535 6 8 2.9857 4.1121 -1.5643 7 6 2.7191 3.3631 0.7104 8 6 3.0640 4.3375 1.6380 9 6 2.9660 4.0622 2.9751 10 6 2.5259 2.8183 3.4076 11 6 2.1789 1.8381 2.5032 12 6 1.7036 0.4932 2.9894 13 6 2.8663 -0.4646 3.0337 14 1 3.8510 -0.1325 2.7395 15 6 2.6731 -1.7646 3.4506 16 7 1.4741 -2.1687 3.8093 17 14 4.1144 -2.9515 3.5061 18 1 5.1512 -2.4283 4.4316 19 1 3.6460 -4.2768 3.9851 20 1 4.6916 -3.0933 2.1452 21 6 2.2760 2.0937 1.1403 22 1 -0.3633 0.5137 0.8901 23 1 -0.3633 0.5138 -0.8899 24 1 -0.3633 -1.0277 -0.0005 25 1 1.8933 -0.5138 -0.8901 26 1 1.8934 -0.5139 0.8898 27 1 3.4081 5.3061 1.3065 28 1 3.2339 4.8175 3.6990 29 1 2.4545 2.6166 4.4662 30 1 0.9424 0.1095 2.3101 31 1 1.2801 0.5969 3.9884 32 1 1.3381 -3.0834 4.1023 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261341149.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:41:17 Heat of formation + Delta-G solvation = 30.430851 kcal Electronic energy + Delta-G solvation = -18094.185993 eV Core-core repulsion = 15216.273949 eV Total energy + Delta-G solvation = -2877.912044 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 247.100 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -44.03404 -38.37003 -37.80873 -34.75269 -33.29574 -31.55173 -31.33025 -28.97496 -27.19212 -24.32269 -23.27714 -23.03583 -22.54802 -19.27185 -17.90368 -17.65836 -17.09342 -16.47690 -15.66264 -15.09168 -14.63781 -14.54841 -13.88699 -13.58321 -13.32574 -12.88611 -12.75368 -12.19933 -12.06864 -11.86719 -11.56212 -11.32001 -11.27040 -10.87265 -10.78404 -10.46535 -10.05391 -9.73634 -9.55516 -9.43735 -8.62099 -8.40221 -6.98100 -6.23842 -4.30936 1.20365 1.89098 2.30270 2.85456 3.18910 3.24894 3.28415 3.73739 4.14917 4.31292 4.69178 5.05708 5.09867 5.32616 5.38898 5.41804 5.61131 5.70655 5.77412 6.00259 6.01536 6.28702 6.32725 6.43024 6.58657 6.75323 6.89923 7.05011 7.26664 7.39834 7.51753 7.70881 7.74343 8.08529 8.57978 8.75602 9.34579 10.83029 Molecular weight = 247.10amu Principal moments of inertia in cm(-1) A = 0.023367 B = 0.008354 C = 0.007245 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1197.980838 B = 3350.973662 C = 3863.743265 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C 0.120 3.880 3 N -0.426 5.426 4 O -0.064 6.064 5 C 0.488 3.512 6 O -0.479 6.479 7 C -0.283 4.283 8 C -0.022 4.022 9 C -0.172 4.172 10 C -0.055 4.055 11 C -0.073 4.073 12 C 0.043 3.957 13 C -0.522 4.522 14 H 0.057 0.943 15 C 0.065 3.935 16 N -0.886 5.886 17 Si 0.891 3.109 18 H -0.275 1.275 19 H -0.285 1.285 20 H -0.275 1.275 21 C 0.174 3.826 22 H 0.068 0.932 23 H 0.052 0.948 24 H 0.079 0.921 25 H 0.084 0.916 26 H 0.151 0.849 27 H 0.123 0.877 28 H 0.124 0.876 29 H 0.131 0.869 30 H 0.038 0.962 31 H 0.034 0.966 32 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.967 5.060 -2.635 5.786 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C 0.004 3.996 3 N -0.166 5.166 4 O -0.079 6.079 5 C 0.336 3.664 6 O -0.368 6.368 7 C -0.290 4.290 8 C -0.041 4.041 9 C -0.191 4.191 10 C -0.075 4.075 11 C -0.077 4.077 12 C 0.007 3.993 13 C -0.560 4.560 14 H 0.076 0.924 15 C -0.138 4.138 16 N -0.524 5.524 17 Si 0.718 3.282 18 H -0.200 1.200 19 H -0.211 1.211 20 H -0.201 1.201 21 C 0.067 3.933 22 H 0.087 0.913 23 H 0.071 0.929 24 H 0.098 0.902 25 H 0.102 0.898 26 H 0.169 0.831 27 H 0.141 0.859 28 H 0.142 0.858 29 H 0.149 0.851 30 H 0.056 0.944 31 H 0.052 0.948 32 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -1.055 4.949 -3.346 6.066 hybrid contribution 0.847 -0.636 -0.005 1.059 sum -0.209 4.313 -3.350 5.465 Atomic orbital electron populations 1.22269 0.94956 1.03228 1.02416 1.22583 0.95063 0.74497 1.07477 1.43390 1.66173 1.11943 0.95091 1.84287 1.74626 1.27090 1.21891 1.20639 0.77310 0.79276 0.89170 1.90941 1.50396 1.38479 1.56949 1.20203 1.17728 0.97492 0.93618 1.19803 0.95834 0.96957 0.91499 1.20691 1.05663 0.97875 0.94898 1.21055 0.95139 0.91660 0.99620 1.19656 1.01292 0.99217 0.87507 1.18510 0.96867 0.86299 0.97643 1.21037 0.94664 0.94792 1.45501 0.92434 1.24990 0.95772 0.98231 0.94850 1.69929 1.20994 1.17956 1.43545 0.86659 0.82670 0.80063 0.78772 1.20012 1.21098 1.20077 1.18845 0.95327 0.89668 0.89502 0.91325 0.92868 0.90198 0.89777 0.83132 0.85934 0.85799 0.85100 0.94361 0.94768 0.92491 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.54 9.73 37.16 0.36 -2.18 16 2 C 0.12 2.02 6.17 -4.04 -0.02 2.00 16 3 N -0.43 -7.98 3.32 -58.72 -0.19 -8.17 16 4 O -0.06 -1.22 10.83 -7.86 -0.09 -1.30 16 5 C 0.49 9.68 8.95 34.20 0.31 9.98 16 6 O -0.48 -10.22 18.06 -18.96 -0.34 -10.56 16 7 C -0.28 -5.37 6.54 -105.08 -0.69 -6.06 16 8 C -0.02 -0.36 10.04 -39.84 -0.40 -0.76 16 9 C -0.17 -2.61 9.99 -39.85 -0.40 -3.01 16 10 C -0.06 -0.95 9.65 -39.51 -0.38 -1.33 16 11 C -0.07 -1.45 5.08 -104.49 -0.53 -1.98 16 12 C 0.04 0.97 4.41 -29.03 -0.13 0.84 16 13 C -0.52 -12.78 7.56 -34.44 -0.26 -13.04 16 14 H 0.06 1.45 7.74 -52.49 -0.41 1.04 16 15 C 0.06 1.62 5.46 -17.82 -0.10 1.52 16 16 N -0.89 -23.12 13.29 55.43 0.74 -22.38 16 17 Si 0.89 19.65 29.54 -169.99 -5.02 14.63 16 18 H -0.27 -6.10 7.11 56.52 0.40 -5.70 16 19 H -0.29 -6.28 7.11 56.52 0.40 -5.87 16 20 H -0.28 -6.01 7.11 56.52 0.40 -5.61 16 21 C 0.17 3.41 6.77 -84.21 -0.57 2.84 16 22 H 0.07 1.11 7.06 -51.93 -0.37 0.74 16 23 H 0.05 0.73 8.14 -51.93 -0.42 0.30 16 24 H 0.08 1.08 8.14 -51.93 -0.42 0.65 16 25 H 0.08 1.23 8.14 -51.93 -0.42 0.80 16 26 H 0.15 2.96 4.49 -51.93 -0.23 2.72 16 27 H 0.12 1.73 8.06 -52.49 -0.42 1.30 16 28 H 0.12 1.48 8.06 -52.49 -0.42 1.06 16 29 H 0.13 2.07 8.06 -52.48 -0.42 1.65 16 30 H 0.04 0.85 4.49 -51.93 -0.23 0.62 16 31 H 0.03 0.81 8.05 -51.93 -0.42 0.39 16 32 H 0.27 6.64 8.31 -40.82 -0.34 6.30 16 LS Contribution 275.43 15.07 4.15 4.15 Total: -1.00 -27.54 275.43 -6.90 -34.43 By element: Atomic # 1 Polarization: 3.73 SS G_CDS: -3.33 Total: 0.40 kcal Atomic # 6 Polarization: -8.38 SS G_CDS: -2.81 Total: -11.19 kcal Atomic # 7 Polarization: -31.09 SS G_CDS: 0.54 Total: -30.55 kcal Atomic # 8 Polarization: -11.44 SS G_CDS: -0.43 Total: -11.87 kcal Atomic # 14 Polarization: 19.65 SS G_CDS: -5.02 Total: 14.63 kcal Total LS contribution 4.15 Total: 4.15 kcal Total: -27.54 -6.90 -34.43 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261341149.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 64.864 kcal (2) G-P(sol) polarization free energy of solvation -27.538 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.327 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.896 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.433 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.431 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds