Wall clock time and date at job start Mon Mar 30 2020 05:35:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53001 * 109.46929 * 2 1 4 4 N 1.46503 * 109.46976 * 119.99468 * 2 1 3 5 5 O 1.20995 * 123.62681 * 299.70911 * 4 2 1 6 6 C 1.34511 * 112.56947 * 179.81878 * 5 4 2 7 7 O 1.21821 * 127.35751 * 180.15053 * 6 5 4 8 8 C 1.46053 * 105.29202 * 0.42001 * 6 5 4 9 9 C 1.36787 * 123.62819 * 119.99940 * 4 2 1 10 10 C 1.39361 * 135.00352 * 0.02950 * 9 4 2 11 11 C 1.38138 * 120.90409 * 179.97438 * 10 9 4 12 12 C 1.37966 * 121.78202 * 359.97438 * 11 10 9 13 13 C 1.40982 * 119.94074 * 359.97438 * 12 11 10 14 14 C 1.40750 * 120.80949 * 179.97438 * 13 12 11 15 15 H 1.08003 * 120.00140 * 155.41385 * 14 13 12 16 16 C 1.40235 * 120.00140 * 335.42355 * 14 13 12 17 17 N 1.30660 * 119.99778 * 343.17958 * 16 14 13 18 18 Si 1.86799 * 120.00343 * 163.17644 * 16 14 13 19 19 H 1.48500 * 109.47106 * 89.99907 * 18 16 14 20 20 H 1.48498 * 109.47055 * 209.99632 * 18 16 14 21 21 H 1.48493 * 109.47016 * 329.99940 * 18 16 14 22 22 H 1.09002 * 109.47009 * 180.02562 * 1 2 3 23 23 H 1.08999 * 109.46630 * 60.00808 * 1 2 3 24 24 H 1.08996 * 109.47782 * 300.00299 * 1 2 3 25 25 H 1.09001 * 109.47149 * 239.99430 * 2 1 3 26 26 H 1.08996 * 109.47133 * 59.99303 * 3 2 1 27 27 H 1.08997 * 109.47049 * 179.97438 * 3 2 1 28 28 H 1.08999 * 109.46805 * 299.99085 * 3 2 1 29 29 H 1.08003 * 119.55175 * 359.97160 * 10 9 4 30 30 H 1.07996 * 119.10770 * 179.97438 * 11 10 9 31 31 H 1.07991 * 120.02813 * 180.02562 * 12 11 10 32 32 H 0.97005 * 120.00269 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 2.0183 -0.6905 1.1963 5 8 1.7709 -0.3317 2.3250 6 6 2.3282 -1.1289 3.2540 7 8 2.2513 -1.0189 4.4648 8 6 3.0509 -2.1508 2.5013 9 6 2.8077 -1.8069 1.1573 10 6 3.3606 -2.5881 0.1443 11 6 4.1396 -3.6892 0.4425 12 6 4.4035 -4.0615 1.7446 13 6 3.8727 -3.3098 2.8127 14 6 4.1298 -3.6735 4.1479 15 1 4.0808 -2.9294 4.9292 16 6 4.4496 -5.0018 4.4637 17 7 4.1951 -5.9561 3.6083 18 14 5.2396 -5.4070 6.1072 19 1 4.1805 -5.6848 7.1104 20 1 6.1063 -6.6036 5.9582 21 1 6.0599 -4.2548 6.5595 22 1 -0.3633 -1.0277 0.0005 23 1 -0.3632 0.5137 -0.8901 24 1 -0.3634 0.5138 0.8899 25 1 1.8934 -0.5139 -0.8899 26 1 1.6765 1.9564 0.8899 27 1 3.1299 1.4425 0.0005 28 1 1.6767 1.9562 -0.8901 29 1 3.1776 -2.3291 -0.8881 30 1 4.5533 -4.2744 -0.3653 31 1 5.0166 -4.9275 1.9453 32 1 4.4159 -6.8751 3.8268 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261356188.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:35:18 Heat of formation + Delta-G solvation = 22.117020 kcal Electronic energy + Delta-G solvation = -17895.358475 eV Core-core repulsion = 15017.085916 eV Total energy + Delta-G solvation = -2878.272559 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 247.100 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -43.19761 -37.12900 -36.78929 -35.17604 -34.00686 -31.02432 -29.96862 -28.35827 -27.19247 -25.61820 -23.00632 -22.25028 -21.63278 -19.20459 -17.52807 -16.95447 -16.82915 -16.26463 -15.27779 -14.95962 -14.59073 -14.03543 -13.36046 -13.18033 -12.98180 -12.72471 -12.27752 -12.19939 -11.96252 -11.86139 -11.45673 -11.25083 -11.15230 -11.04879 -10.97387 -10.63003 -10.21713 -10.01897 -9.47929 -8.87215 -8.59296 -7.70716 -7.11128 -6.52110 -4.65771 2.16904 2.75924 2.76091 2.96415 3.02360 3.14181 3.75508 3.76023 4.36959 4.43440 4.90819 5.05861 5.19079 5.45625 5.53409 5.57890 5.80905 5.82287 5.99356 6.03515 6.23181 6.25510 6.38403 6.57884 6.74039 6.92252 7.04455 7.34686 7.56258 7.76342 7.92272 8.05840 8.36976 8.55795 8.65672 8.75662 9.24828 9.79676 Molecular weight = 247.10amu Principal moments of inertia in cm(-1) A = 0.033760 B = 0.007159 C = 0.006235 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 829.179222 B = 3910.125282 C = 4489.467799 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C 0.177 3.823 3 C -0.167 4.167 4 N -0.450 5.450 5 O -0.093 6.093 6 C 0.487 3.513 7 O -0.498 6.498 8 C -0.369 4.369 9 C 0.190 3.810 10 C -0.294 4.294 11 C -0.034 4.034 12 C -0.213 4.213 13 C 0.196 3.804 14 C -0.409 4.409 15 H 0.095 0.905 16 C 0.073 3.927 17 N -0.757 5.757 18 Si 0.920 3.080 19 H -0.263 1.263 20 H -0.272 1.272 21 H -0.254 1.254 22 H 0.063 0.937 23 H 0.070 0.930 24 H 0.064 0.936 25 H 0.107 0.893 26 H 0.064 0.936 27 H 0.063 0.937 28 H 0.070 0.930 29 H 0.092 0.908 30 H 0.097 0.903 31 H 0.125 0.875 32 H 0.290 0.710 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.593 4.676 -7.204 8.735 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.226 4.226 2 C 0.078 3.922 3 C -0.226 4.226 4 N -0.196 5.196 5 O -0.109 6.109 6 C 0.340 3.660 7 O -0.389 6.389 8 C -0.376 4.376 9 C 0.088 3.912 10 C -0.319 4.319 11 C -0.054 4.054 12 C -0.234 4.234 13 C 0.191 3.809 14 C -0.435 4.435 15 H 0.113 0.887 16 C -0.151 4.151 17 N -0.380 5.380 18 Si 0.742 3.258 19 H -0.188 1.188 20 H -0.196 1.196 21 H -0.178 1.178 22 H 0.082 0.918 23 H 0.089 0.911 24 H 0.083 0.917 25 H 0.125 0.875 26 H 0.083 0.917 27 H 0.082 0.918 28 H 0.089 0.911 29 H 0.110 0.890 30 H 0.115 0.885 31 H 0.143 0.857 32 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -1.899 4.846 -6.710 8.492 hybrid contribution 0.209 -0.302 0.664 0.759 sum -1.690 4.544 -6.046 7.750 Atomic orbital electron populations 1.22226 0.94656 1.03044 1.02660 1.21187 0.94577 0.93132 0.83338 1.22226 1.02169 0.95493 1.02678 1.42796 1.53276 1.28129 0.95360 1.84164 1.68509 1.51384 1.06828 1.20532 0.79157 0.81115 0.85193 1.90878 1.64285 1.74551 1.09180 1.20928 1.17314 1.07965 0.91354 1.18681 0.90012 0.85977 0.96550 1.18907 1.15549 1.03091 0.94335 1.20396 0.94945 0.93873 0.96175 1.21232 1.07454 1.03927 0.90746 1.17655 0.84068 0.85811 0.93332 1.19992 1.34625 0.94329 0.94539 0.88669 1.26243 0.92928 0.95950 0.99965 1.69766 1.30599 1.01925 1.35666 0.86095 0.79890 0.79145 0.80629 1.18821 1.19625 1.17784 0.91776 0.91130 0.91705 0.87472 0.91702 0.91817 0.91130 0.89022 0.88454 0.85705 0.89899 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.10 9.36 37.16 0.35 -1.75 16 2 C 0.18 2.57 3.56 -67.93 -0.24 2.32 16 3 C -0.17 -2.06 9.35 37.16 0.35 -1.72 16 4 N -0.45 -9.12 3.08 -52.27 -0.16 -9.28 16 5 O -0.09 -2.10 10.46 -8.21 -0.09 -2.19 16 6 C 0.49 12.79 8.92 33.86 0.30 13.09 16 7 O -0.50 -14.12 17.92 -19.02 -0.34 -14.46 16 8 C -0.37 -9.75 6.51 -102.91 -0.67 -10.42 16 9 C 0.19 4.39 6.84 -84.25 -0.58 3.81 16 10 C -0.29 -6.30 9.77 -39.20 -0.38 -6.68 16 11 C -0.03 -0.75 9.93 -39.72 -0.39 -1.15 16 12 C -0.21 -5.30 8.74 -38.64 -0.34 -5.63 16 13 C 0.20 5.30 5.71 -105.04 -0.60 4.70 16 14 C -0.41 -10.98 9.10 -37.88 -0.34 -11.32 16 15 H 0.10 2.63 7.76 -52.48 -0.41 2.22 16 16 C 0.07 1.75 5.18 -17.30 -0.09 1.66 16 17 N -0.76 -18.32 10.93 55.56 0.61 -17.72 16 18 Si 0.92 18.09 29.59 -169.99 -5.03 13.06 16 19 H -0.26 -5.18 7.11 56.52 0.40 -4.78 16 20 H -0.27 -5.04 7.11 56.52 0.40 -4.64 16 21 H -0.25 -5.04 7.11 56.52 0.40 -4.64 16 22 H 0.06 0.86 8.14 -51.93 -0.42 0.44 16 23 H 0.07 0.65 8.14 -51.93 -0.42 0.23 16 24 H 0.06 0.86 8.14 -51.93 -0.42 0.44 16 25 H 0.11 1.40 7.26 -51.93 -0.38 1.02 16 26 H 0.06 0.85 8.13 -51.93 -0.42 0.43 16 27 H 0.06 0.83 8.14 -51.93 -0.42 0.41 16 28 H 0.07 0.64 8.14 -51.93 -0.42 0.22 16 29 H 0.09 1.67 7.53 -52.48 -0.40 1.27 16 30 H 0.10 1.82 8.06 -52.49 -0.42 1.40 16 31 H 0.13 3.10 6.18 -52.49 -0.32 2.78 16 32 H 0.29 6.21 8.29 -40.82 -0.34 5.87 16 LS Contribution 280.18 15.07 4.22 4.22 Total: -1.00 -29.74 280.18 -7.02 -36.77 By element: Atomic # 1 Polarization: 6.28 SS G_CDS: -3.60 Total: 2.68 kcal Atomic # 6 Polarization: -10.44 SS G_CDS: -2.64 Total: -13.08 kcal Atomic # 7 Polarization: -27.44 SS G_CDS: 0.45 Total: -27.00 kcal Atomic # 8 Polarization: -16.22 SS G_CDS: -0.43 Total: -16.65 kcal Atomic # 14 Polarization: 18.09 SS G_CDS: -5.03 Total: 13.06 kcal Total LS contribution 4.22 Total: 4.22 kcal Total: -29.74 -7.02 -36.77 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261356188.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 58.885 kcal (2) G-P(sol) polarization free energy of solvation -29.743 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.142 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.025 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.768 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.117 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds