Wall clock time and date at job start Mon Mar 30 2020 06:13:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13604 * 1 3 3 C 1.47198 * 179.97438 * 2 1 4 4 C 1.53001 * 109.47243 * 305.21041 * 3 2 1 5 5 N 1.46498 * 109.47089 * 180.02562 * 4 3 2 6 6 C 1.46497 * 120.00025 * 269.99685 * 5 4 3 7 7 C 1.50697 * 109.47532 * 270.00254 * 6 5 4 8 8 H 1.08007 * 119.99671 * 0.02562 * 7 6 5 9 9 C 1.37879 * 120.00569 * 179.97438 * 7 6 5 10 10 N 1.31513 * 120.00177 * 180.02562 * 9 7 6 11 11 Si 1.86800 * 119.99433 * 0.02562 * 9 7 6 12 12 H 1.48495 * 109.47219 * 90.00126 * 11 9 7 13 13 H 1.48499 * 109.46839 * 210.00014 * 11 9 7 14 14 H 1.48501 * 109.47270 * 329.99601 * 11 9 7 15 15 C 1.39671 * 119.99975 * 90.00118 * 5 4 3 16 16 C 1.38946 * 120.06186 * 359.97424 * 15 5 4 17 17 C 1.38100 * 119.97200 * 180.02562 * 16 15 5 18 18 C 1.38266 * 120.10196 * 0.02562 * 17 16 15 19 19 C 1.38502 * 120.12307 * 0.02562 * 18 17 16 20 20 F 1.35092 * 119.98550 * 179.97438 * 19 18 17 21 21 C 1.38346 * 120.02423 * 359.97438 * 19 18 17 22 22 H 1.09004 * 109.46793 * 185.21463 * 3 2 1 23 23 H 1.08998 * 109.47549 * 65.21449 * 3 2 1 24 24 H 1.08996 * 109.47025 * 60.00191 * 4 3 2 25 25 H 1.09006 * 109.47021 * 300.00359 * 4 3 2 26 26 H 1.09001 * 109.46917 * 30.00584 * 6 5 4 27 27 H 1.08997 * 109.47012 * 149.99843 * 6 5 4 28 28 H 0.96998 * 119.99468 * 180.02562 * 10 9 7 29 29 H 1.07995 * 120.01377 * 0.02562 * 16 15 5 30 30 H 1.08000 * 119.94820 * 180.02562 * 17 16 15 31 31 H 1.08003 * 119.94070 * 179.97438 * 18 17 16 32 32 H 1.07991 * 120.04979 * 180.27899 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1184 -0.8308 1.1786 5 7 4.5834 -0.8296 1.1789 6 6 5.3169 -1.8656 0.4475 7 6 5.5688 -3.0402 1.3573 8 1 5.2172 -3.0174 2.3783 9 6 6.2471 -4.1442 0.8862 10 7 6.4665 -5.1695 1.6802 11 14 6.8545 -4.1837 -0.8799 12 1 8.2276 -3.6219 -0.9438 13 1 6.8705 -5.5866 -1.3665 14 1 5.9481 -3.3741 -1.7333 15 6 5.2808 0.1591 1.8767 16 6 4.5864 1.1425 2.5705 17 6 5.2778 2.1195 3.2593 18 6 6.6605 2.1212 3.2593 19 6 7.3568 1.1435 2.5682 20 9 8.7077 1.1481 2.5697 21 6 6.6694 0.1623 1.8764 22 1 2.9709 1.0243 0.0934 23 1 2.9716 -0.4300 -0.9330 24 1 2.7556 -1.8544 1.0852 25 1 2.7548 -0.4001 2.1116 26 1 4.7283 -2.1903 -0.4106 27 1 6.2690 -1.4620 0.1030 28 1 6.9440 -5.9460 1.3487 29 1 3.5065 1.1428 2.5710 30 1 4.7377 2.8835 3.7988 31 1 7.1986 2.8868 3.7986 32 1 7.2118 -0.6029 1.3412 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000041229649.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:13:50 Heat of formation + Delta-G solvation = 12.781556 kcal Electronic energy + Delta-G solvation = -17259.288452 eV Core-core repulsion = 14327.557955 eV Total energy + Delta-G solvation = -2931.730497 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 248.102 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -48.44948 -39.21023 -36.96992 -35.80261 -32.93508 -31.74441 -30.00392 -29.52226 -27.16989 -24.07741 -22.91960 -21.61817 -20.12149 -17.75881 -17.40171 -16.88359 -16.12783 -15.75325 -15.21127 -15.13686 -14.62432 -14.46506 -14.01923 -13.77769 -13.50533 -12.82669 -12.69509 -12.47405 -12.32609 -12.25665 -11.83141 -11.66317 -11.29700 -11.13641 -10.97000 -10.70885 -10.43487 -10.35256 -9.72508 -9.20095 -8.74370 -8.37261 -6.82484 -6.22808 -4.24424 1.65624 1.88450 2.72502 2.79511 3.16237 3.21979 3.25163 3.53069 4.09007 4.24201 4.25282 4.76649 5.00792 5.06732 5.14161 5.18272 5.44314 5.45942 5.53347 5.73008 5.87347 5.98223 6.08765 6.23827 6.53149 6.54686 6.65365 6.75256 6.79134 7.26271 7.41395 7.55220 7.75565 8.00754 8.36979 8.84239 9.35826 10.90059 Molecular weight = 248.10amu Principal moments of inertia in cm(-1) A = 0.011862 B = 0.010053 C = 0.005963 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2359.995730 B = 2784.577880 C = 4694.570250 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.446 5.446 2 C 0.217 3.783 3 C -0.052 4.052 4 C 0.131 3.869 5 N -0.599 5.599 6 C 0.218 3.782 7 C -0.541 4.541 8 H 0.078 0.922 9 C 0.075 3.925 10 N -0.891 5.891 11 Si 0.870 3.130 12 H -0.273 1.273 13 H -0.283 1.283 14 H -0.264 1.264 15 C 0.262 3.738 16 C -0.225 4.225 17 C -0.049 4.049 18 C -0.231 4.231 19 C 0.140 3.860 20 F -0.146 7.146 21 C -0.220 4.220 22 H 0.110 0.890 23 H 0.112 0.888 24 H 0.091 0.909 25 H 0.078 0.922 26 H 0.033 0.967 27 H 0.031 0.969 28 H 0.266 0.734 29 H 0.123 0.877 30 H 0.122 0.878 31 H 0.121 0.879 32 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.987 12.594 -1.573 12.846 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.123 5.123 2 C -0.101 4.101 3 C -0.094 4.094 4 C 0.005 3.995 5 N -0.304 5.304 6 C 0.097 3.903 7 C -0.579 4.579 8 H 0.097 0.903 9 C -0.129 4.129 10 N -0.528 5.528 11 Si 0.697 3.303 12 H -0.198 1.198 13 H -0.209 1.209 14 H -0.189 1.189 15 C 0.156 3.844 16 C -0.248 4.248 17 C -0.068 4.068 18 C -0.252 4.252 19 C 0.120 3.880 20 F -0.125 7.125 21 C -0.244 4.244 22 H 0.128 0.872 23 H 0.130 0.870 24 H 0.110 0.890 25 H 0.097 0.903 26 H 0.051 0.949 27 H 0.048 0.952 28 H 0.076 0.924 29 H 0.141 0.859 30 H 0.140 0.860 31 H 0.139 0.861 32 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -3.651 12.209 -1.695 12.855 hybrid contribution 1.161 -0.331 -0.839 1.471 sum -2.490 11.877 -2.534 12.397 Atomic orbital electron populations 1.81208 1.13069 1.09172 1.08898 1.29132 0.95133 0.92854 0.93013 1.19936 0.81252 1.04562 1.03615 1.21182 0.81265 1.00934 0.96104 1.46736 1.03412 1.27544 1.52688 1.19772 0.92041 0.86272 0.92223 1.21425 1.37509 0.99133 0.99858 0.90347 1.24894 0.95289 0.95324 0.97368 1.69889 1.40750 1.06345 1.35841 0.86948 0.80039 0.77940 0.85399 1.19838 1.20914 1.18882 1.17531 0.90375 0.87316 0.89217 1.20673 0.99632 0.98546 1.05908 1.20550 0.92923 0.96955 0.96334 1.20691 0.94894 1.02025 1.07621 1.17427 0.76232 0.96162 0.98171 1.91452 1.29711 1.96276 1.95036 1.20739 0.93494 1.02252 1.07895 0.87225 0.87022 0.89040 0.90345 0.94885 0.95158 0.92366 0.85936 0.85986 0.86077 0.83972 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.45 -6.63 18.54 42.15 0.78 -5.85 16 2 C 0.22 2.64 15.43 -20.76 -0.32 2.32 16 3 C -0.05 -0.53 6.03 -29.52 -0.18 -0.71 16 4 C 0.13 1.75 5.11 -4.04 -0.02 1.73 16 5 N -0.60 -10.10 2.59 -173.13 -0.45 -10.55 16 6 C 0.22 4.41 3.98 -5.20 -0.02 4.39 16 7 C -0.54 -13.77 9.94 -34.44 -0.34 -14.12 16 8 H 0.08 2.26 8.06 -52.48 -0.42 1.83 16 9 C 0.07 1.99 5.47 -17.82 -0.10 1.89 16 10 N -0.89 -25.79 13.96 55.43 0.77 -25.01 16 11 Si 0.87 19.48 27.47 -169.99 -4.67 14.81 16 12 H -0.27 -6.09 7.11 56.52 0.40 -5.69 16 13 H -0.28 -6.43 7.11 56.52 0.40 -6.03 16 14 H -0.26 -5.47 6.54 56.52 0.37 -5.10 16 15 C 0.26 4.35 6.55 -83.80 -0.55 3.80 16 16 C -0.22 -3.10 9.21 -39.37 -0.36 -3.46 16 17 C -0.05 -0.62 10.04 -39.62 -0.40 -1.02 16 18 C -0.23 -3.28 10.02 -39.47 -0.40 -3.68 16 19 C 0.14 2.35 7.30 -39.44 -0.29 2.06 16 20 F -0.15 -2.52 17.27 2.25 0.04 -2.48 16 21 C -0.22 -3.98 9.18 -39.31 -0.36 -4.34 16 22 H 0.11 0.96 8.14 -51.93 -0.42 0.53 16 23 H 0.11 1.08 8.14 -51.93 -0.42 0.66 16 24 H 0.09 1.32 8.07 -51.93 -0.42 0.90 16 25 H 0.08 0.95 6.19 -51.93 -0.32 0.63 16 26 H 0.03 0.64 7.13 -51.93 -0.37 0.27 16 27 H 0.03 0.62 5.63 -51.93 -0.29 0.33 16 28 H 0.27 7.24 8.31 -40.82 -0.34 6.90 16 29 H 0.12 1.41 6.14 -52.49 -0.32 1.09 16 30 H 0.12 1.19 8.06 -52.49 -0.42 0.76 16 31 H 0.12 1.47 8.06 -52.48 -0.42 1.05 16 32 H 0.14 2.81 6.14 -52.49 -0.32 2.48 16 LS Contribution 286.90 15.07 4.32 4.32 Total: -1.00 -29.42 286.90 -5.86 -35.28 By element: Atomic # 1 Polarization: 3.96 SS G_CDS: -3.33 Total: 0.63 kcal Atomic # 6 Polarization: -7.81 SS G_CDS: -3.33 Total: -11.14 kcal Atomic # 7 Polarization: -42.52 SS G_CDS: 1.11 Total: -41.42 kcal Atomic # 9 Polarization: -2.52 SS G_CDS: 0.04 Total: -2.48 kcal Atomic # 14 Polarization: 19.48 SS G_CDS: -4.67 Total: 14.81 kcal Total LS contribution 4.32 Total: 4.32 kcal Total: -29.42 -5.86 -35.28 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000041229649.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.059 kcal (2) G-P(sol) polarization free energy of solvation -29.416 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.643 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.862 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.278 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.782 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds