Wall clock time and date at job start Mon Mar 30 2020 06:26:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.52998 * 109.46936 * 2 1 4 4 H 1.08995 * 109.47599 * 56.18536 * 3 2 1 5 5 C 1.50700 * 109.46807 * 176.18931 * 3 2 1 6 6 H 1.08001 * 119.99964 * 115.11843 * 5 3 2 7 7 C 1.37871 * 120.00073 * 295.11411 * 5 3 2 8 8 N 1.31518 * 120.00047 * 348.23986 * 7 5 3 9 9 Si 1.86797 * 120.00305 * 168.23289 * 7 5 3 10 10 H 1.48500 * 109.46993 * 60.00280 * 9 7 5 11 11 H 1.48498 * 109.47561 * 180.02562 * 9 7 5 12 12 H 1.48504 * 109.47243 * 300.00670 * 9 7 5 13 13 N 1.46506 * 109.46831 * 296.18596 * 3 2 1 14 14 C 1.39841 * 119.99914 * 94.99419 * 13 3 2 15 15 C 1.39051 * 119.96706 * 6.70596 * 14 13 3 16 16 C 1.38153 * 120.27570 * 179.76468 * 15 14 13 17 17 C 1.38290 * 120.20032 * 0.51423 * 16 15 14 18 18 F 1.35098 * 120.03287 * 179.76954 * 17 16 15 19 19 C 1.39842 * 119.93193 * 359.73709 * 17 16 15 20 20 C 1.43200 * 120.13482 * 180.02562 * 19 17 16 21 21 N 7.80767 * 62.67772 * 317.20755 * 2 1 3 22 22 C 1.38526 * 119.96900 * 186.98166 * 14 13 3 23 23 H 1.09001 * 109.47090 * 185.22086 * 1 2 3 24 24 H 1.08998 * 109.47421 * 305.22410 * 1 2 3 25 25 H 1.09001 * 109.46957 * 65.22386 * 1 2 3 26 26 H 1.09001 * 109.47109 * 239.99550 * 2 1 3 27 27 H 1.08994 * 109.46653 * 120.00080 * 2 1 3 28 28 H 0.97003 * 119.99710 * 1.02245 * 8 7 5 29 29 H 0.96993 * 120.00149 * 274.98653 * 13 3 2 30 30 H 1.08006 * 119.86709 * 359.97438 * 15 14 13 31 31 H 1.07997 * 119.90078 * 180.23079 * 16 15 14 32 32 H 1.07995 * 120.09843 * 359.95043 * 22 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6219 1.9757 0.8538 5 6 3.5440 1.4435 0.0944 6 1 4.1363 1.8221 -0.7255 7 6 4.1639 0.9613 1.2276 8 7 3.4580 0.7176 2.3102 9 14 6.0064 0.6539 1.2253 10 1 6.7199 1.9245 0.9393 11 1 6.4242 0.1394 2.5542 12 1 6.3400 -0.3471 0.1802 13 7 1.6280 2.1060 -1.2395 14 6 0.4584 2.8721 -1.2672 15 6 -0.2379 3.1193 -0.0892 16 6 -1.3914 3.8794 -0.1084 17 6 -1.8676 4.3910 -1.3017 18 9 -2.9985 5.1299 -1.3173 19 6 -1.1769 4.1432 -2.4922 20 6 -1.6658 4.6713 -3.7302 21 7 -2.0537 5.0902 -4.7124 22 6 -0.0084 3.3791 -2.4688 23 1 -0.3633 -1.0234 0.0935 24 1 -0.3634 0.5927 0.8395 25 1 -0.3633 0.4307 -0.9331 26 1 1.8934 -0.5139 -0.8899 27 1 1.8933 -0.5138 0.8900 28 1 2.4990 0.8630 2.3067 29 1 2.1666 2.0141 -2.0410 30 1 0.1263 2.7184 0.8452 31 1 -1.9254 4.0707 0.8106 32 1 0.5299 3.1844 -3.3845 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000051636594.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:26:33 Heat of formation + Delta-G solvation = -1.074806 kcal Electronic energy + Delta-G solvation = -17288.567297 eV Core-core repulsion = 14356.235944 eV Total energy + Delta-G solvation = -2932.331354 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 248.102 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -48.67941 -39.41305 -36.90369 -35.88512 -33.06791 -31.56358 -31.14894 -28.73468 -25.99314 -24.18597 -23.16602 -22.13935 -20.35508 -18.70486 -17.59751 -17.15132 -16.17212 -15.83558 -15.51917 -14.60240 -13.95954 -13.89928 -13.82230 -13.53482 -13.40036 -13.13018 -12.88468 -12.69183 -12.35278 -12.28592 -11.96487 -11.61607 -11.07817 -10.88508 -10.76734 -10.61166 -10.24607 -10.06458 -9.61300 -8.99179 -8.83516 -8.46512 -6.91137 -6.61939 -4.35603 0.82180 1.51254 2.65079 3.06253 3.31225 3.32932 3.51151 3.76661 3.93586 4.14035 4.36430 4.41286 4.87956 5.09549 5.26512 5.38879 5.68085 5.85024 5.87662 5.89879 6.09137 6.14206 6.31159 6.38554 6.52035 6.58677 6.75736 6.79107 6.98636 7.23439 7.46881 7.63532 7.80974 8.26108 8.37919 8.57945 9.33945 10.74961 Molecular weight = 248.10amu Principal moments of inertia in cm(-1) A = 0.034489 B = 0.005290 C = 0.005058 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 811.647034 B = 5291.433656 C = 5534.267833 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.135 4.135 3 C 0.258 3.742 4 H 0.040 0.960 5 C -0.618 4.618 6 H 0.056 0.944 7 C 0.031 3.969 8 N -0.898 5.898 9 Si 1.067 2.933 10 H -0.287 1.287 11 H -0.281 1.281 12 H -0.286 1.286 13 N -0.710 5.710 14 C 0.232 3.768 15 C -0.146 4.146 16 C -0.099 4.099 17 C 0.057 3.943 18 F -0.143 7.143 19 C -0.014 4.014 20 C 0.265 3.735 21 N -0.423 5.423 22 C -0.148 4.148 23 H 0.038 0.962 24 H 0.047 0.953 25 H 0.046 0.954 26 H 0.048 0.952 27 H 0.072 0.928 28 H 0.272 0.728 29 H 0.396 0.604 30 H 0.143 0.857 31 H 0.139 0.861 32 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.024 2.059 -3.496 7.263 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.174 4.174 3 C 0.155 3.845 4 H 0.058 0.942 5 C -0.656 4.656 6 H 0.074 0.926 7 C -0.175 4.175 8 N -0.533 5.533 9 Si 0.895 3.105 10 H -0.214 1.214 11 H -0.206 1.206 12 H -0.213 1.213 13 N -0.332 5.332 14 C 0.122 3.878 15 C -0.170 4.170 16 C -0.119 4.119 17 C 0.032 3.968 18 F -0.122 7.122 19 C -0.019 4.019 20 C -0.050 4.050 21 N -0.099 5.099 22 C -0.174 4.174 23 H 0.057 0.943 24 H 0.066 0.934 25 H 0.065 0.935 26 H 0.067 0.933 27 H 0.090 0.910 28 H 0.083 0.917 29 H 0.230 0.770 30 H 0.161 0.839 31 H 0.157 0.843 32 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -5.297 2.086 -3.857 6.877 hybrid contribution -1.087 0.409 -0.926 1.485 sum -6.384 2.495 -4.783 8.358 Atomic orbital electron populations 1.21895 0.98072 1.00005 1.00775 1.22081 0.93043 1.00317 1.01953 1.18959 0.95425 0.88112 0.81996 0.94243 1.22007 0.90237 1.47469 1.05912 0.92564 1.25747 1.06966 0.93322 0.91494 1.70849 1.09300 1.45298 1.27805 0.83554 0.74029 0.76701 0.76247 1.21372 1.20624 1.21284 1.45406 1.21718 1.50951 1.15079 1.17824 0.87730 0.89856 0.92431 1.20986 0.95900 1.01700 0.98364 1.20778 0.96920 0.97847 0.96329 1.17203 0.86287 0.99995 0.93281 1.91460 1.48529 1.74978 1.97264 1.15601 0.97434 1.03079 0.85814 1.25528 0.93331 0.93344 0.92845 1.81181 1.08409 1.09202 1.11087 1.20351 0.96505 1.02874 0.97674 0.94319 0.93403 0.93536 0.93281 0.90950 0.91736 0.77003 0.83898 0.84310 0.84831 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.47 8.61 37.16 0.32 -2.15 16 2 C -0.13 -2.64 5.34 -26.73 -0.14 -2.79 16 3 C 0.26 5.31 1.80 -69.08 -0.12 5.19 16 4 H 0.04 0.87 5.00 -51.93 -0.26 0.61 16 5 C -0.62 -14.87 8.68 -34.44 -0.30 -15.17 16 6 H 0.06 1.36 7.84 -52.49 -0.41 0.95 16 7 C 0.03 0.78 5.13 -17.82 -0.09 0.69 16 8 N -0.90 -23.78 12.98 55.43 0.72 -23.07 16 9 Si 1.07 22.63 29.92 -169.99 -5.09 17.55 16 10 H -0.29 -5.92 7.11 56.52 0.40 -5.52 16 11 H -0.28 -6.07 7.11 56.52 0.40 -5.67 16 12 H -0.29 -5.85 7.11 56.52 0.40 -5.45 16 13 N -0.71 -12.18 4.93 -53.31 -0.26 -12.44 16 14 C 0.23 3.53 5.38 -83.80 -0.45 3.08 16 15 C -0.15 -2.14 7.90 -39.31 -0.31 -2.45 16 16 C -0.10 -1.29 10.00 -39.59 -0.40 -1.68 16 17 C 0.06 0.79 7.27 -38.96 -0.28 0.50 16 18 F -0.14 -2.08 16.80 2.25 0.04 -2.04 16 19 C -0.01 -0.20 5.74 -106.85 -0.61 -0.81 16 20 C 0.26 3.96 14.97 -22.47 -0.34 3.62 16 21 N -0.42 -6.93 18.54 41.84 0.78 -6.16 16 22 C -0.15 -2.01 9.60 -38.95 -0.37 -2.38 16 23 H 0.04 0.59 8.14 -51.93 -0.42 0.16 16 24 H 0.05 0.76 7.10 -51.93 -0.37 0.39 16 25 H 0.05 0.73 6.91 -51.93 -0.36 0.38 16 26 H 0.05 0.96 8.14 -51.93 -0.42 0.54 16 27 H 0.07 1.60 6.52 -51.93 -0.34 1.26 16 28 H 0.27 7.03 6.26 -40.82 -0.26 6.77 16 29 H 0.40 6.37 8.71 -40.82 -0.36 6.02 16 30 H 0.14 2.22 5.28 -52.48 -0.28 1.94 16 31 H 0.14 1.48 8.06 -52.49 -0.42 1.06 16 32 H 0.13 1.59 8.06 -52.49 -0.42 1.17 16 LS Contribution 280.93 15.07 4.23 4.23 Total: -1.00 -25.86 280.93 -5.80 -31.66 By element: Atomic # 1 Polarization: 7.72 SS G_CDS: -3.11 Total: 4.61 kcal Atomic # 6 Polarization: -11.25 SS G_CDS: -3.10 Total: -14.35 kcal Atomic # 7 Polarization: -42.90 SS G_CDS: 1.23 Total: -41.66 kcal Atomic # 9 Polarization: -2.08 SS G_CDS: 0.04 Total: -2.04 kcal Atomic # 14 Polarization: 22.63 SS G_CDS: -5.09 Total: 17.55 kcal Total LS contribution 4.23 Total: 4.23 kcal Total: -25.86 -5.80 -31.66 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000051636594.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.586 kcal (2) G-P(sol) polarization free energy of solvation -25.864 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.721 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.796 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.660 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.075 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds