Wall clock time and date at job start Mon Mar 30 2020 06:33:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.36790 * 125.06438 * 2 1 4 4 C 1.50696 * 125.04713 * 0.02562 * 3 2 1 5 5 H 1.09000 * 109.47004 * 335.22859 * 4 3 2 6 6 N 1.46896 * 109.47368 * 215.22407 * 4 3 2 7 7 C 1.50700 * 109.46881 * 95.22212 * 4 3 2 8 8 H 1.08005 * 120.00296 * 0.02562 * 7 4 3 9 9 C 1.37872 * 120.00001 * 180.02562 * 7 4 3 10 10 N 1.31517 * 120.00301 * 0.02562 * 9 7 4 11 11 Si 1.86801 * 120.00180 * 180.02562 * 9 7 4 12 12 H 1.48500 * 109.47255 * 359.97438 * 11 9 7 13 13 H 1.48498 * 109.47549 * 120.00049 * 11 9 7 14 14 H 1.48505 * 109.46961 * 239.99891 * 11 9 7 15 15 C 1.34262 * 109.91712 * 180.02562 * 3 2 1 16 16 C 1.46476 * 107.00764 * 359.97438 * 15 3 2 17 17 C 1.39708 * 134.00388 * 180.02562 * 16 15 3 18 18 C 1.36595 * 119.80475 * 179.97438 * 17 16 15 19 19 C 1.38838 * 120.55087 * 359.79094 * 18 17 16 20 20 C 1.37943 * 120.63162 * 0.44848 * 19 18 17 21 21 F 1.35101 * 120.12874 * 179.80605 * 20 19 18 22 22 C 1.37776 * 125.07494 * 180.02562 * 2 1 3 23 23 H 1.09000 * 109.46963 * 267.28926 * 1 2 3 24 24 H 1.08995 * 109.47479 * 27.29498 * 1 2 3 25 25 H 1.09012 * 109.46830 * 147.29648 * 1 2 3 26 26 H 1.00893 * 111.00354 * 295.06308 * 6 4 3 27 27 H 1.00901 * 110.99907 * 59.02221 * 6 4 3 28 28 H 0.96999 * 120.00206 * 179.97438 * 10 9 7 29 29 H 1.07996 * 126.49093 * 180.02562 * 15 3 2 30 30 H 1.07996 * 120.09849 * 359.97438 * 17 16 15 31 31 H 1.08002 * 119.72654 * 180.02562 * 18 17 16 32 32 H 1.08000 * 119.69220 * 180.25887 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2509 1.1196 0.0000 4 6 1.7382 2.5367 0.0006 5 1 0.7370 2.5610 -0.4297 6 7 2.6352 3.3823 -0.7984 7 6 1.6895 3.0527 1.4156 8 1 1.9992 2.4180 2.2329 9 6 1.2495 4.3349 1.6671 10 7 0.8719 5.1076 0.6721 11 14 1.1898 4.9747 3.4211 12 1 1.6634 3.9174 4.3501 13 1 2.0640 6.1689 3.5425 14 1 -0.2063 5.3463 3.7652 15 6 3.5469 0.7688 -0.0006 16 6 3.5944 -0.6952 -0.0003 17 6 4.6303 -1.6326 -0.0002 18 6 4.3384 -2.9670 0.0005 19 6 3.0196 -3.4009 0.0056 20 6 1.9810 -2.4931 0.0006 21 9 0.7014 -2.9266 0.0016 22 6 2.2568 -1.1276 -0.0005 23 1 -0.3633 -0.0486 1.0265 24 1 -0.3634 0.9132 -0.4712 25 1 -0.3633 -0.8649 -0.5553 26 1 3.5492 3.4409 -0.3750 27 1 2.6974 3.0472 -1.7481 28 1 0.5620 6.0095 0.8491 29 1 4.3937 1.4391 -0.0003 30 1 5.6588 -1.3032 -0.0007 31 1 5.1402 -3.6906 0.0010 32 1 2.8047 -4.4593 0.0103 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259557310.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:33:21 Heat of formation + Delta-G solvation = 15.011396 kcal Electronic energy + Delta-G solvation = -17716.258737 eV Core-core repulsion = 14784.624933 eV Total energy + Delta-G solvation = -2931.633804 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 248.102 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -48.62892 -40.84556 -36.97157 -34.43270 -32.20160 -31.38913 -29.76136 -28.27375 -26.17094 -25.62466 -23.13225 -21.58634 -21.11345 -18.94676 -17.11600 -16.69003 -16.49971 -15.59499 -15.58121 -14.87413 -14.68017 -14.42909 -14.20613 -13.88510 -13.17328 -12.74756 -12.64333 -12.34055 -12.25549 -11.96259 -11.34352 -11.23351 -11.06572 -10.94860 -10.81956 -10.64737 -9.97965 -9.36872 -9.06301 -8.56994 -7.76936 -7.38853 -7.06665 -6.01947 -4.18339 1.30755 1.80306 3.20208 3.25153 3.29335 3.35125 3.40743 4.07784 4.39473 4.51399 4.91796 5.10696 5.21993 5.24089 5.37269 5.55724 5.63777 5.80832 5.90756 5.96060 6.14887 6.20701 6.35070 6.42066 6.53617 6.79760 6.91646 7.09880 7.37390 7.67398 7.74980 7.79898 8.00146 8.46892 8.85950 8.97765 9.51601 11.02070 Molecular weight = 248.10amu Principal moments of inertia in cm(-1) A = 0.030532 B = 0.006414 C = 0.006102 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 916.858132 B = 4364.649973 C = 4587.722050 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.079 3.921 2 N -0.471 5.471 3 C 0.116 3.884 4 C 0.275 3.725 5 H 0.049 0.951 6 N -0.800 5.800 7 C -0.534 4.534 8 H 0.057 0.943 9 C 0.085 3.915 10 N -0.845 5.845 11 Si 0.888 3.112 12 H -0.273 1.273 13 H -0.282 1.282 14 H -0.284 1.284 15 C -0.239 4.239 16 C -0.073 4.073 17 C -0.086 4.086 18 C -0.131 4.131 19 C -0.153 4.153 20 C 0.087 3.913 21 F -0.149 7.149 22 C 0.050 3.950 23 H 0.069 0.931 24 H 0.091 0.909 25 H 0.072 0.928 26 H 0.326 0.674 27 H 0.301 0.699 28 H 0.258 0.742 29 H 0.143 0.857 30 H 0.123 0.877 31 H 0.124 0.876 32 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.258 -12.075 -2.503 12.754 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 N -0.153 5.153 3 C 0.004 3.996 4 C 0.164 3.836 5 H 0.066 0.934 6 N -0.325 5.325 7 C -0.573 4.573 8 H 0.075 0.925 9 C -0.122 4.122 10 N -0.479 5.479 11 Si 0.715 3.285 12 H -0.198 1.198 13 H -0.208 1.208 14 H -0.210 1.210 15 C -0.263 4.263 16 C -0.079 4.079 17 C -0.105 4.105 18 C -0.151 4.151 19 C -0.173 4.173 20 C 0.066 3.934 21 F -0.128 7.128 22 C -0.057 4.057 23 H 0.088 0.912 24 H 0.110 0.890 25 H 0.091 0.909 26 H 0.138 0.862 27 H 0.112 0.888 28 H 0.068 0.932 29 H 0.161 0.839 30 H 0.141 0.859 31 H 0.142 0.858 32 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 2.237 -11.242 -2.421 11.716 hybrid contribution 0.241 -0.646 0.934 1.161 sum 2.478 -11.888 -1.487 12.235 Atomic orbital electron populations 1.21965 0.77182 1.03860 1.03238 1.43952 1.06073 1.03616 1.61653 1.23140 0.90358 0.91319 0.94736 1.18023 0.92897 0.77533 0.95186 0.93374 1.59282 1.15414 1.54913 1.02897 1.20795 1.47365 0.99131 0.90048 0.92500 1.24937 0.94154 0.96587 0.96561 1.70109 1.40085 1.07610 1.30091 0.86625 0.77679 0.79021 0.85161 1.19800 1.20794 1.20989 1.21241 0.95930 0.91356 1.17753 1.19167 0.90761 0.94201 1.03786 1.20263 0.98036 0.91890 1.00300 1.20301 0.95193 0.95476 1.04096 1.20611 0.91852 0.98462 1.06404 1.16705 0.78789 0.88930 1.09002 1.91418 1.36533 1.90260 1.94573 1.18281 0.91894 0.86990 1.08574 0.91193 0.89037 0.90900 0.86168 0.88821 0.93214 0.83949 0.85944 0.85772 0.85317 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.34 10.58 59.85 0.63 1.97 16 2 N -0.47 -9.30 3.18 -117.14 -0.37 -9.67 16 3 C 0.12 2.44 5.79 -81.78 -0.47 1.97 16 4 C 0.27 6.47 2.84 -70.02 -0.20 6.27 16 5 H 0.05 1.22 6.72 -51.93 -0.35 0.88 16 6 N -0.80 -17.84 8.35 -6.65 -0.06 -17.89 16 7 C -0.53 -14.09 8.67 -34.44 -0.30 -14.39 16 8 H 0.06 1.55 7.74 -52.48 -0.41 1.14 16 9 C 0.09 2.28 5.39 -17.82 -0.10 2.18 16 10 N -0.84 -23.49 12.77 55.43 0.71 -22.78 16 11 Si 0.89 20.72 29.54 -169.99 -5.02 15.70 16 12 H -0.27 -6.40 7.11 56.52 0.40 -6.00 16 13 H -0.28 -6.57 7.11 56.52 0.40 -6.17 16 14 H -0.28 -6.57 7.11 56.52 0.40 -6.17 16 15 C -0.24 -4.72 10.37 -37.67 -0.39 -5.11 16 16 C -0.07 -1.36 6.37 -105.15 -0.67 -2.03 16 17 C -0.09 -1.30 10.05 -39.63 -0.40 -1.70 16 18 C -0.13 -1.75 9.97 -39.95 -0.40 -2.15 16 19 C -0.15 -2.18 9.99 -39.47 -0.39 -2.58 16 20 C 0.09 1.48 7.32 -39.29 -0.29 1.19 16 21 F -0.15 -2.47 15.91 2.25 0.04 -2.43 16 22 C 0.05 0.95 6.82 -83.91 -0.57 0.38 16 23 H 0.07 1.15 8.14 -51.93 -0.42 0.73 16 24 H 0.09 1.53 6.72 -51.93 -0.35 1.19 16 25 H 0.07 1.08 7.11 -51.92 -0.37 0.72 16 26 H 0.33 7.00 8.13 -39.30 -0.32 6.68 16 27 H 0.30 6.00 9.02 -39.29 -0.35 5.65 16 28 H 0.26 6.86 8.31 -40.82 -0.34 6.52 16 29 H 0.14 2.61 7.52 -52.49 -0.39 2.22 16 30 H 0.12 1.55 8.06 -52.49 -0.42 1.13 16 31 H 0.12 1.24 8.06 -52.49 -0.42 0.82 16 32 H 0.13 1.48 8.06 -52.49 -0.42 1.06 16 LS Contribution 278.81 15.07 4.20 4.20 Total: -1.00 -29.06 278.81 -7.42 -36.48 By element: Atomic # 1 Polarization: 13.75 SS G_CDS: -3.37 Total: 10.38 kcal Atomic # 6 Polarization: -10.44 SS G_CDS: -3.54 Total: -13.98 kcal Atomic # 7 Polarization: -50.63 SS G_CDS: 0.28 Total: -50.35 kcal Atomic # 9 Polarization: -2.47 SS G_CDS: 0.04 Total: -2.43 kcal Atomic # 14 Polarization: 20.72 SS G_CDS: -5.02 Total: 15.70 kcal Total LS contribution 4.20 Total: 4.20 kcal Total: -29.06 -7.42 -36.48 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259557310.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 51.492 kcal (2) G-P(sol) polarization free energy of solvation -29.065 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.427 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.416 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.480 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.011 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds