Wall clock time and date at job start Mon Mar 30 2020 06:33:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.36907 * 125.06918 * 2 1 4 4 C 1.34198 * 109.92470 * 180.02562 * 3 2 1 5 5 C 1.50704 * 126.50139 * 179.97438 * 4 3 2 6 6 H 1.08999 * 109.47247 * 145.02263 * 5 4 3 7 7 N 1.46904 * 109.46729 * 25.02238 * 5 4 3 8 8 C 1.50700 * 109.47302 * 265.02790 * 5 4 3 9 9 H 1.08005 * 119.99856 * 359.97438 * 8 5 4 10 10 C 1.37872 * 120.00114 * 179.97438 * 8 5 4 11 11 N 1.31516 * 120.00186 * 359.97438 * 10 8 5 12 12 Si 1.86800 * 119.99929 * 179.97438 * 10 8 5 13 13 H 1.48501 * 109.47196 * 59.99772 * 12 10 8 14 14 H 1.48504 * 109.47178 * 180.02562 * 12 10 8 15 15 H 1.48496 * 109.47272 * 299.99675 * 12 10 8 16 16 C 1.46531 * 107.00431 * 0.02562 * 4 3 2 17 17 C 1.39628 * 133.99340 * 179.97438 * 16 4 3 18 18 C 1.36603 * 119.80484 * 179.97438 * 17 16 4 19 19 C 1.39038 * 120.50190 * 359.97438 * 18 17 16 20 20 F 1.35094 * 119.69726 * 180.02562 * 19 18 17 21 21 C 1.37944 * 120.60459 * 0.04249 * 19 18 17 22 22 C 1.37693 * 125.06641 * 179.70417 * 2 1 3 23 23 H 1.09002 * 109.47391 * 90.02042 * 1 2 3 24 24 H 1.09001 * 109.46813 * 330.02098 * 1 2 3 25 25 H 1.09004 * 109.47041 * 210.02225 * 1 2 3 26 26 H 1.08005 * 125.03505 * 359.97438 * 3 2 1 27 27 H 1.00899 * 110.99431 * 176.04309 * 7 5 4 28 28 H 1.00895 * 110.99895 * 300.00157 * 7 5 4 29 29 H 0.97002 * 119.99842 * 180.02562 * 11 10 8 30 30 H 1.08010 * 120.09946 * 0.02562 * 17 16 4 31 31 H 1.07996 * 119.75416 * 180.02562 * 18 17 16 32 32 H 1.08004 * 120.11669 * 180.02562 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2516 1.1205 0.0000 4 6 3.5470 0.7699 -0.0006 5 6 4.7288 1.7051 -0.0013 6 1 5.5365 1.2703 0.5875 7 7 4.3342 2.9932 0.5845 8 6 5.1985 1.9200 -1.4170 9 1 4.6921 1.4282 -2.2345 10 6 6.2745 2.7444 -1.6687 11 7 6.8908 3.3436 -0.6733 12 14 6.8572 3.0102 -3.4235 13 1 5.7566 3.6016 -4.2263 14 1 8.0216 3.9318 -3.4242 15 1 7.2568 1.7081 -4.0150 16 6 3.5945 -0.6946 -0.0016 17 6 4.6300 -1.6313 -0.0029 18 6 4.3383 -2.9658 -0.0031 19 6 3.0173 -3.3995 -0.0014 20 9 2.7474 -4.7232 -0.0011 21 6 1.9797 -2.4905 -0.0004 22 6 2.2561 -1.1270 0.0058 23 1 -0.3634 -0.0004 -1.0277 24 1 -0.3633 0.8902 0.5135 25 1 -0.3633 -0.8898 0.5142 26 1 1.8841 2.1361 -0.0004 27 1 5.1251 3.6158 0.6546 28 1 3.5862 3.4167 0.0562 29 1 7.6477 3.9239 -0.8505 30 1 5.6586 -1.3017 -0.0030 31 1 5.1398 -3.6896 -0.0037 32 1 0.9565 -2.8360 0.0013 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259624081.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:33:25 Heat of formation + Delta-G solvation = 11.904162 kcal Electronic energy + Delta-G solvation = -17517.683041 eV Core-core repulsion = 14585.914497 eV Total energy + Delta-G solvation = -2931.768543 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 248.102 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -48.56074 -40.79191 -36.40797 -34.96232 -32.25162 -30.66636 -30.12263 -27.82225 -26.57050 -25.30694 -22.59933 -21.98775 -21.06808 -18.71812 -16.79528 -16.66732 -16.39486 -15.86466 -15.35122 -14.77242 -14.75745 -14.55302 -13.74437 -13.71354 -13.22062 -12.83592 -12.59419 -12.38508 -12.31762 -12.24511 -11.29474 -11.06741 -10.95095 -10.70858 -10.60718 -10.50101 -10.04928 -9.68478 -9.03665 -8.59468 -7.67518 -7.26342 -6.90647 -6.04154 -4.21454 1.44550 1.89939 3.19137 3.25257 3.30414 3.31161 3.40387 4.23737 4.38867 4.64232 4.94974 5.05011 5.15405 5.29478 5.35141 5.45456 5.50443 5.58716 5.88468 5.98224 6.29102 6.41639 6.50909 6.60436 6.82630 6.94268 7.25617 7.29417 7.60468 7.73958 7.78307 7.93014 8.15835 8.71983 8.96659 9.12944 9.50057 10.91699 Molecular weight = 248.10amu Principal moments of inertia in cm(-1) A = 0.023548 B = 0.006904 C = 0.005965 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1188.767577 B = 4054.704965 C = 4692.670673 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.084 3.916 2 N -0.492 5.492 3 C 0.025 3.975 4 C -0.092 4.092 5 C 0.271 3.729 6 H 0.047 0.953 7 N -0.850 5.850 8 C -0.538 4.538 9 H 0.054 0.946 10 C 0.066 3.934 11 N -0.896 5.896 12 Si 0.895 3.105 13 H -0.278 1.278 14 H -0.287 1.287 15 H -0.276 1.276 16 C -0.108 4.108 17 C -0.022 4.022 18 C -0.196 4.196 19 C 0.107 3.893 20 F -0.148 7.148 21 C -0.176 4.176 22 C 0.117 3.883 23 H 0.062 0.938 24 H 0.079 0.921 25 H 0.073 0.927 26 H 0.164 0.836 27 H 0.356 0.644 28 H 0.308 0.692 29 H 0.265 0.735 30 H 0.135 0.865 31 H 0.128 0.872 32 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.696 -6.987 1.504 12.046 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 N -0.177 5.177 3 C -0.096 4.096 4 C -0.098 4.098 5 C 0.161 3.839 6 H 0.064 0.936 7 N -0.380 5.380 8 C -0.578 4.578 9 H 0.072 0.928 10 C -0.136 4.136 11 N -0.535 5.535 12 Si 0.722 3.278 13 H -0.204 1.204 14 H -0.212 1.212 15 H -0.202 1.202 16 C -0.114 4.114 17 C -0.040 4.040 18 C -0.216 4.216 19 C 0.086 3.914 20 F -0.127 7.127 21 C -0.198 4.198 22 C 0.009 3.991 23 H 0.081 0.919 24 H 0.098 0.902 25 H 0.092 0.908 26 H 0.182 0.818 27 H 0.172 0.828 28 H 0.117 0.883 29 H 0.075 0.925 30 H 0.153 0.847 31 H 0.146 0.854 32 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -10.084 -7.258 2.212 12.620 hybrid contribution 0.488 0.330 -2.031 2.115 sum -9.596 -6.928 0.181 11.837 Atomic orbital electron populations 1.21807 0.78131 1.03519 1.02333 1.43688 1.05206 1.04252 1.64543 1.21449 0.90007 0.90058 1.08110 1.20993 0.94857 0.91028 1.02919 1.17368 0.87877 0.85618 0.93048 0.93552 1.59483 1.14537 1.08162 1.55773 1.21823 1.14446 1.27988 0.93566 0.92754 1.25006 0.95800 0.95597 0.97239 1.69729 1.22200 1.30922 1.30670 0.86616 0.78144 0.78142 0.84862 1.20363 1.21241 1.20164 1.19270 0.91424 0.94088 1.06591 1.20250 0.99259 0.90655 0.93845 1.20478 0.94397 0.96685 1.10036 1.17103 0.93387 0.76561 1.04305 1.91431 1.94844 1.32147 1.94297 1.19561 0.98410 0.89713 1.12106 1.17791 0.90588 0.87437 1.03320 0.91916 0.90178 0.90837 0.81849 0.82765 0.88312 0.92470 0.84700 0.85387 0.86014 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.94 11.03 59.85 0.66 1.60 16 2 N -0.49 -8.10 3.18 -121.79 -0.39 -8.49 16 3 C 0.02 0.46 10.58 -16.71 -0.18 0.28 16 4 C -0.09 -1.99 5.37 -102.70 -0.55 -2.54 16 5 C 0.27 6.65 3.23 -70.01 -0.23 6.43 16 6 H 0.05 1.26 8.14 -51.93 -0.42 0.84 16 7 N -0.85 -19.61 8.95 -6.65 -0.06 -19.67 16 8 C -0.54 -14.28 8.71 -34.44 -0.30 -14.58 16 9 H 0.05 1.48 7.74 -52.48 -0.41 1.08 16 10 C 0.07 1.74 5.38 -17.82 -0.10 1.65 16 11 N -0.90 -24.31 11.54 55.43 0.64 -23.67 16 12 Si 0.89 20.84 29.54 -169.99 -5.02 15.82 16 13 H -0.28 -6.45 7.11 56.52 0.40 -6.05 16 14 H -0.29 -6.62 7.11 56.52 0.40 -6.22 16 15 H -0.28 -6.46 7.11 56.52 0.40 -6.06 16 16 C -0.11 -2.19 6.35 -105.12 -0.67 -2.86 16 17 C -0.02 -0.40 10.05 -39.65 -0.40 -0.80 16 18 C -0.20 -3.22 9.95 -39.88 -0.40 -3.62 16 19 C 0.11 1.75 7.28 -39.39 -0.29 1.46 16 20 F -0.15 -2.32 17.25 2.25 0.04 -2.28 16 21 C -0.18 -2.84 9.93 -39.36 -0.39 -3.23 16 22 C 0.12 2.11 6.81 -83.99 -0.57 1.53 16 23 H 0.06 0.63 8.14 -51.93 -0.42 0.21 16 24 H 0.08 0.75 8.14 -51.93 -0.42 0.32 16 25 H 0.07 0.70 8.10 -51.93 -0.42 0.28 16 26 H 0.16 2.73 7.31 -52.48 -0.38 2.35 16 27 H 0.36 8.85 7.08 -39.29 -0.28 8.57 16 28 H 0.31 6.64 7.96 -39.29 -0.31 6.33 16 29 H 0.27 6.93 8.31 -40.82 -0.34 6.59 16 30 H 0.14 2.47 8.06 -52.48 -0.42 2.04 16 31 H 0.13 1.79 8.06 -52.49 -0.42 1.37 16 32 H 0.12 1.64 8.06 -52.48 -0.42 1.22 16 LS Contribution 281.54 15.07 4.24 4.24 Total: -1.00 -28.44 281.54 -7.42 -35.86 By element: Atomic # 1 Polarization: 16.34 SS G_CDS: -3.47 Total: 12.87 kcal Atomic # 6 Polarization: -11.28 SS G_CDS: -3.40 Total: -14.68 kcal Atomic # 7 Polarization: -52.02 SS G_CDS: 0.19 Total: -51.83 kcal Atomic # 9 Polarization: -2.32 SS G_CDS: 0.04 Total: -2.28 kcal Atomic # 14 Polarization: 20.84 SS G_CDS: -5.02 Total: 15.82 kcal Total LS contribution 4.24 Total: 4.24 kcal Total: -28.44 -7.42 -35.86 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259624081.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.768 kcal (2) G-P(sol) polarization free energy of solvation -28.441 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.327 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.423 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.864 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.904 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds