Wall clock time and date at job start Mon Mar 30 2020 05:54:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52999 * 109.47317 * 2 1 4 4 C 1.50706 * 109.47238 * 240.00482 * 2 1 3 5 5 C 1.35196 * 126.49638 * 239.71139 * 4 2 1 6 6 C 1.47091 * 103.27404 * 179.97438 * 5 4 2 7 7 C 1.47225 * 127.41268 * 180.12006 * 6 5 4 8 8 O 1.34451 * 127.25383 * 0.24822 * 7 6 5 9 9 N 1.20514 * 113.20480 * 179.97438 * 8 7 6 10 10 C 1.29743 * 113.40503 * 359.97438 * 9 8 7 11 11 C 1.41225 * 127.25300 * 179.97438 * 7 6 5 12 12 C 1.40667 * 128.82135 * 0.02562 * 11 7 6 13 13 H 1.08006 * 120.00027 * 0.02562 * 12 11 7 14 14 C 1.40073 * 119.99933 * 179.97438 * 12 11 7 15 15 N 1.30802 * 120.00166 * 0.02562 * 14 12 11 16 16 Si 1.86797 * 120.00059 * 180.02562 * 14 12 11 17 17 H 1.48499 * 109.47203 * 90.00297 * 16 14 12 18 18 H 1.48498 * 109.47568 * 210.00901 * 16 14 12 19 19 H 1.48510 * 109.47119 * 330.00849 * 16 14 12 20 20 N 1.31664 * 105.17555 * 0.32347 * 6 5 4 21 21 O 1.20762 * 111.46955 * 359.79229 * 20 6 5 22 22 H 1.09002 * 109.47153 * 299.99641 * 1 2 3 23 23 H 1.09001 * 109.46832 * 179.97438 * 1 2 3 24 24 H 1.09004 * 109.47261 * 59.99813 * 1 2 3 25 25 H 1.08996 * 109.47853 * 120.00331 * 2 1 3 26 26 H 1.09002 * 109.46716 * 60.00091 * 3 2 1 27 27 H 1.09000 * 109.47486 * 180.02562 * 3 2 1 28 28 H 1.09001 * 109.47362 * 300.00732 * 3 2 1 29 29 H 1.08004 * 128.36133 * 0.03471 * 5 4 2 30 30 H 1.08001 * 127.23069 * 180.02562 * 10 9 8 31 31 H 0.97003 * 120.00404 * 179.97438 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0324 -0.7103 -1.2306 5 6 2.8172 -1.8108 -1.2597 6 6 2.9915 -2.0633 -2.6983 7 6 3.7603 -3.1488 -3.3292 8 8 4.4493 -4.1239 -2.7110 9 7 4.9872 -4.8837 -3.4763 10 6 4.7808 -4.5913 -4.7234 11 6 3.9250 -3.3884 -4.7112 12 6 3.4065 -2.6639 -5.7997 13 1 2.7903 -1.7942 -5.6252 14 6 3.6901 -3.0697 -7.1100 15 7 4.4368 -4.1227 -7.3214 16 14 3.0022 -2.1072 -8.5555 17 1 3.9616 -1.0419 -8.9425 18 1 2.7901 -3.0237 -9.7046 19 1 1.7076 -1.4908 -8.1687 20 7 2.3158 -1.1070 -3.3004 21 8 1.7912 -0.3671 -2.5031 22 1 -0.3633 0.5138 0.8900 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3634 0.5139 -0.8900 25 1 1.8934 -0.5138 0.8899 26 1 1.6767 1.9563 0.8900 27 1 3.1300 1.4425 -0.0005 28 1 1.6766 1.9564 -0.8899 29 1 3.2185 -2.3701 -0.4275 30 1 5.1539 -5.1188 -5.5887 31 1 4.6330 -4.4040 -8.2288 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259782117.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:54:56 Heat of formation + Delta-G solvation = 89.792547 kcal Electronic energy + Delta-G solvation = -17458.199949 eV Core-core repulsion = 14517.436110 eV Total energy + Delta-G solvation = -2940.763839 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 248.095 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -43.69693 -42.62694 -35.82448 -34.53401 -33.12811 -31.43235 -30.15498 -29.45526 -27.17293 -26.39279 -23.20912 -22.53638 -21.26626 -20.77076 -18.83027 -17.40624 -16.64560 -16.49896 -15.71841 -15.44623 -15.04650 -14.87738 -14.14411 -13.60041 -13.17623 -12.87540 -12.70761 -12.20960 -11.95005 -11.51250 -11.40893 -11.25661 -11.14549 -11.02373 -10.98913 -10.42486 -10.23026 -10.08183 -9.75381 -9.32864 -8.75783 -8.53483 -7.62951 -7.12480 -4.61580 2.12410 2.36546 2.93733 2.95553 3.03008 3.74098 3.74651 3.76605 3.88672 4.40930 4.74014 5.02683 5.07884 5.10872 5.38389 5.59462 5.60547 5.72970 5.80941 5.90135 5.98101 6.10823 6.21703 6.25750 6.33690 6.51874 6.55216 6.89264 6.95007 7.30115 7.59995 8.19368 8.38048 8.52415 9.34278 9.85880 10.02351 Molecular weight = 248.09amu Principal moments of inertia in cm(-1) A = 0.024530 B = 0.006628 C = 0.005405 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1141.192946 B = 4223.626356 C = 5179.059569 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.007 4.007 3 C -0.148 4.148 4 C -0.044 4.044 5 C -0.240 4.240 6 C 0.163 3.837 7 C -0.228 4.228 8 O 0.068 5.932 9 N -0.374 5.374 10 C -0.039 4.039 11 C 0.053 3.947 12 C -0.385 4.385 13 H 0.102 0.898 14 C 0.068 3.932 15 N -0.788 5.788 16 Si 0.930 3.070 17 H -0.264 1.264 18 H -0.273 1.273 19 H -0.255 1.255 20 N -0.375 5.375 21 O 0.073 5.927 22 H 0.062 0.938 23 H 0.059 0.941 24 H 0.063 0.937 25 H 0.095 0.905 26 H 0.062 0.938 27 H 0.059 0.941 28 H 0.063 0.937 29 H 0.162 0.838 30 H 0.199 0.801 31 H 0.289 0.711 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.935 6.981 7.731 11.526 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.027 4.027 3 C -0.205 4.205 4 C -0.106 4.106 5 C -0.261 4.261 6 C 0.009 3.991 7 C -0.288 4.288 8 O -0.003 6.003 9 N -0.078 5.078 10 C -0.222 4.222 11 C 0.045 3.955 12 C -0.415 4.415 13 H 0.120 0.880 14 C -0.152 4.152 15 N -0.414 5.414 16 Si 0.753 3.247 17 H -0.189 1.189 18 H -0.198 1.198 19 H -0.179 1.179 20 N -0.089 5.089 21 O 0.014 5.986 22 H 0.081 0.919 23 H 0.078 0.922 24 H 0.082 0.918 25 H 0.113 0.887 26 H 0.081 0.919 27 H 0.078 0.922 28 H 0.082 0.918 29 H 0.180 0.820 30 H 0.216 0.784 31 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -4.441 6.276 6.946 10.361 hybrid contribution -0.169 0.246 -0.613 0.682 sum -4.610 6.523 6.333 10.193 Atomic orbital electron populations 1.21863 0.93771 1.02513 1.02400 1.19629 0.96222 0.95720 0.91088 1.21864 1.01589 0.94695 1.02402 1.23963 1.00890 0.97598 0.88110 1.23376 1.05918 1.00268 0.96573 1.21095 0.96293 0.93120 0.88625 1.19806 1.18128 1.00921 0.89955 1.84191 1.52222 1.31097 1.32808 1.72897 1.15853 1.14322 1.04688 1.26642 1.02858 0.99129 0.93529 1.20029 0.92515 0.92175 0.90734 1.19249 1.23914 1.09818 0.88514 0.88009 1.26219 0.93067 0.94515 1.01430 1.69542 1.26991 1.20373 1.24469 0.85915 0.80654 0.79673 0.78415 1.18879 1.19772 1.17883 1.74301 1.15671 1.05831 1.13102 1.84608 1.57236 1.44718 1.12013 0.91939 0.92221 0.91833 0.88705 0.91939 0.92222 0.91834 0.82030 0.78445 0.89969 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.52 9.18 37.16 0.34 -1.18 16 2 C -0.01 -0.08 3.34 -91.77 -0.31 -0.39 16 3 C -0.15 -1.52 9.17 37.16 0.34 -1.18 16 4 C -0.04 -0.73 5.96 -35.39 -0.21 -0.94 16 5 C -0.24 -4.60 11.31 -37.08 -0.42 -5.02 16 6 C 0.16 3.93 7.38 -80.70 -0.60 3.33 16 7 C -0.23 -6.08 7.57 -34.80 -0.26 -6.34 16 8 O 0.07 1.77 11.09 16.18 0.18 1.95 16 9 N -0.37 -9.82 11.92 32.09 0.38 -9.44 16 10 C -0.04 -1.03 11.24 -14.60 -0.16 -1.20 16 11 C 0.05 1.47 6.26 -104.02 -0.65 0.82 16 12 C -0.39 -10.38 9.21 -37.98 -0.35 -10.73 16 13 H 0.10 2.76 6.73 -52.48 -0.35 2.40 16 14 C 0.07 1.66 5.50 -17.30 -0.10 1.56 16 15 N -0.79 -19.19 10.64 55.56 0.59 -18.60 16 16 Si 0.93 18.41 29.56 -169.99 -5.03 13.38 16 17 H -0.26 -5.14 7.11 56.52 0.40 -4.73 16 18 H -0.27 -5.15 7.11 56.52 0.40 -4.75 16 19 H -0.26 -5.11 7.11 56.52 0.40 -4.71 16 20 N -0.37 -8.88 10.87 34.30 0.37 -8.51 16 21 O 0.07 1.46 11.09 17.35 0.19 1.65 16 22 H 0.06 0.49 8.14 -51.93 -0.42 0.07 16 23 H 0.06 0.64 8.14 -51.93 -0.42 0.22 16 24 H 0.06 0.69 8.14 -51.93 -0.42 0.27 16 25 H 0.09 0.95 8.12 -51.93 -0.42 0.53 16 26 H 0.06 0.49 8.14 -51.93 -0.42 0.07 16 27 H 0.06 0.64 8.14 -51.93 -0.42 0.22 16 28 H 0.06 0.69 8.14 -51.93 -0.42 0.27 16 29 H 0.16 2.69 8.06 -52.48 -0.42 2.27 16 30 H 0.20 5.12 6.29 -52.49 -0.33 4.79 16 31 H 0.29 6.28 8.30 -40.82 -0.34 5.94 16 LS Contribution 278.96 15.07 4.20 4.20 Total: -1.00 -29.12 278.96 -4.67 -33.80 By element: Atomic # 1 Polarization: 6.03 SS G_CDS: -3.20 Total: 2.84 kcal Atomic # 6 Polarization: -18.89 SS G_CDS: -2.37 Total: -21.27 kcal Atomic # 7 Polarization: -37.89 SS G_CDS: 1.35 Total: -36.54 kcal Atomic # 8 Polarization: 3.23 SS G_CDS: 0.37 Total: 3.60 kcal Atomic # 14 Polarization: 18.41 SS G_CDS: -5.03 Total: 13.38 kcal Total LS contribution 4.20 Total: 4.20 kcal Total: -29.12 -4.67 -33.80 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259782117.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 123.588 kcal (2) G-P(sol) polarization free energy of solvation -29.121 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 94.467 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.674 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.795 kcal (6) G-S(sol) free energy of system = (1) + (5) 89.793 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds