Wall clock time and date at job start Mon Mar 30 2020 06:20:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.50702 * 109.46701 * 2 1 4 4 N 1.30085 * 124.95858 * 270.21406 * 3 2 1 5 5 C 1.35815 * 109.63829 * 180.27023 * 4 3 2 6 6 C 1.40452 * 106.96033 * 359.72249 * 5 4 3 7 7 C 1.38840 * 119.95102 * 179.97438 * 6 5 4 8 8 C 1.37853 * 119.87208 * 359.97438 * 7 6 5 9 9 C 1.38746 * 120.47851 * 0.02562 * 8 7 6 10 10 C 1.37841 * 120.49488 * 359.97438 * 9 8 7 11 11 F 1.35102 * 120.13438 * 179.97438 * 10 9 8 12 12 N 1.36083 * 124.95652 * 90.00025 * 3 2 1 13 13 C 1.46499 * 126.34829 * 0.02562 * 12 3 2 14 14 C 1.50701 * 109.46992 * 269.71243 * 13 12 3 15 15 H 1.07998 * 120.00129 * 0.02562 * 14 13 12 16 16 C 1.37880 * 119.99861 * 179.97438 * 14 13 12 17 17 N 1.31512 * 119.99594 * 180.02562 * 16 14 13 18 18 Si 1.86797 * 119.99875 * 0.02562 * 16 14 13 19 19 H 1.48504 * 109.47061 * 90.00257 * 18 16 14 20 20 H 1.48497 * 109.46906 * 209.99430 * 18 16 14 21 21 H 1.48498 * 109.47403 * 329.99876 * 18 16 14 22 22 H 1.08998 * 109.47458 * 299.99753 * 1 2 3 23 23 H 1.08999 * 109.47510 * 60.00083 * 1 2 3 24 24 H 1.09010 * 109.46762 * 180.02562 * 1 2 3 25 25 H 1.08998 * 109.47458 * 240.00247 * 2 1 3 26 26 H 1.08991 * 109.47424 * 119.99567 * 2 1 3 27 27 H 1.07999 * 120.06607 * 179.97438 * 7 6 5 28 28 H 1.07997 * 119.75838 * 180.02562 * 8 7 6 29 29 H 1.07993 * 119.75328 * 180.02562 * 9 8 7 30 30 H 1.09002 * 109.47391 * 149.71233 * 13 12 3 31 31 H 1.09001 * 109.46813 * 29.71290 * 13 12 3 32 32 H 0.97002 * 119.99739 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0322 1.4209 0.0000 4 7 2.2768 2.1250 -1.0661 5 6 2.7203 3.3575 -0.7073 6 6 2.7363 3.3945 0.6966 7 6 3.1511 4.5443 1.3550 8 6 3.5470 5.6467 0.6282 9 6 3.5337 5.6170 -0.7588 10 6 3.1251 4.4847 -1.4304 11 9 3.1146 4.4640 -2.7812 12 7 2.2920 2.1560 1.1153 13 6 2.1360 1.7131 2.5030 14 6 0.7450 2.0406 2.9815 15 1 0.0469 2.5294 2.3181 16 6 0.3634 1.7153 4.2658 17 7 -0.8507 2.0007 4.6831 18 14 1.5707 0.8693 5.4130 19 1 2.3384 1.8933 6.1662 20 1 0.8267 0.0079 6.3667 21 1 2.5067 0.0343 4.6181 22 1 -0.3634 0.5138 0.8900 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3633 -1.0278 0.0005 25 1 1.8933 -0.5138 -0.8900 26 1 1.8933 -0.5137 0.8899 27 1 3.1637 4.5749 2.4345 28 1 3.8698 6.5400 1.1423 29 1 3.8467 6.4873 -1.3165 30 1 2.8660 2.2233 3.1315 31 1 2.2961 0.6364 2.5609 32 1 -1.1191 1.7722 5.5868 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260005385.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:20:40 Heat of formation + Delta-G solvation = 12.357525 kcal Electronic energy + Delta-G solvation = -17760.256177 eV Core-core repulsion = 14828.507293 eV Total energy + Delta-G solvation = -2931.748884 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 248.102 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -48.41450 -41.64353 -36.95217 -34.27242 -33.03656 -32.41461 -29.68572 -28.44088 -27.85652 -24.07427 -23.19361 -21.91234 -21.23077 -19.27489 -17.33756 -17.25185 -16.83587 -15.73430 -15.45060 -15.00055 -14.67109 -14.59964 -13.91019 -13.70990 -13.45270 -12.86028 -12.61957 -12.39195 -12.11021 -11.76268 -11.50913 -11.33428 -11.15309 -10.97566 -10.82914 -10.67239 -10.53298 -9.93229 -9.58108 -9.40589 -8.92956 -7.91533 -7.47463 -6.41127 -4.46593 1.23024 1.81065 3.02942 3.09124 3.11642 3.20216 3.37928 4.07485 4.08710 4.38881 4.66290 4.86619 5.01268 5.18743 5.42924 5.56441 5.64242 5.66822 5.77356 5.88261 5.96870 6.18198 6.23848 6.27807 6.37619 6.39211 6.67017 6.78397 6.82900 7.05911 7.10629 7.20980 7.67537 8.13028 8.36617 8.62402 9.13293 10.70682 Molecular weight = 248.10amu Principal moments of inertia in cm(-1) A = 0.024012 B = 0.007861 C = 0.006510 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1165.809965 B = 3561.167006 C = 4299.747040 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.040 4.040 3 C 0.294 3.706 4 N -0.505 5.505 5 C 0.009 3.991 6 C 0.080 3.920 7 C -0.103 4.103 8 C -0.096 4.096 9 C -0.171 4.171 10 C 0.139 3.861 11 F -0.138 7.138 12 N -0.451 5.451 13 C 0.209 3.791 14 C -0.547 4.547 15 H 0.082 0.918 16 C 0.083 3.917 17 N -0.880 5.880 18 Si 0.871 3.129 19 H -0.271 1.271 20 H -0.278 1.278 21 H -0.264 1.264 22 H 0.079 0.921 23 H 0.055 0.945 24 H 0.061 0.939 25 H 0.089 0.911 26 H 0.084 0.916 27 H 0.129 0.871 28 H 0.133 0.867 29 H 0.134 0.866 30 H 0.041 0.959 31 H 0.050 0.950 32 H 0.270 0.730 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.604 0.808 -5.258 9.280 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.079 4.079 3 C 0.029 3.971 4 N -0.225 5.225 5 C -0.112 4.112 6 C -0.033 4.033 7 C -0.123 4.123 8 C -0.116 4.116 9 C -0.192 4.192 10 C 0.118 3.882 11 F -0.117 7.117 12 N -0.135 5.135 13 C 0.089 3.911 14 C -0.585 4.585 15 H 0.100 0.900 16 C -0.122 4.122 17 N -0.516 5.516 18 Si 0.697 3.303 19 H -0.196 1.196 20 H -0.204 1.204 21 H -0.189 1.189 22 H 0.098 0.902 23 H 0.074 0.926 24 H 0.080 0.920 25 H 0.108 0.892 26 H 0.102 0.898 27 H 0.147 0.853 28 H 0.151 0.849 29 H 0.152 0.848 30 H 0.059 0.941 31 H 0.068 0.932 32 H 0.081 0.919 Dipole moment (debyes) X Y Z Total from point charges 7.335 0.445 -5.799 9.361 hybrid contribution 0.502 -0.086 1.427 1.515 sum 7.837 0.359 -4.372 8.981 Atomic orbital electron populations 1.21759 0.93087 1.02117 1.03791 1.20074 0.97433 0.86775 1.03591 1.23558 0.96719 0.96057 0.80788 1.70391 1.21719 1.02709 1.27694 1.18866 1.07261 0.94002 0.91103 1.18622 1.02674 0.88644 0.93389 1.20092 1.01437 0.90584 1.00216 1.20540 1.00749 0.97782 0.92529 1.20684 1.06485 0.96999 0.95081 1.16721 1.02587 0.92874 0.76005 1.91444 1.94229 1.96921 1.29095 1.45689 1.49303 1.09477 1.09032 1.20132 0.99613 0.96578 0.74766 1.21095 0.95758 1.42137 0.99508 0.89952 1.24801 0.95197 0.94790 0.97428 1.69864 1.17773 1.45561 1.18410 0.86936 0.81499 0.80359 0.81534 1.19613 1.20359 1.18885 0.90222 0.92595 0.92026 0.89235 0.89765 0.85280 0.84867 0.84842 0.94080 0.93226 0.91936 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.44 9.89 37.16 0.37 -2.07 16 2 C -0.04 -0.65 6.23 -27.88 -0.17 -0.82 16 3 C 0.29 5.95 7.11 -154.80 -1.10 4.85 16 4 N -0.50 -10.85 11.27 -8.19 -0.09 -10.94 16 5 C 0.01 0.18 7.21 -84.65 -0.61 -0.43 16 6 C 0.08 1.65 6.87 -83.99 -0.58 1.07 16 7 C -0.10 -1.81 10.04 -39.50 -0.40 -2.21 16 8 C -0.10 -1.40 10.02 -39.53 -0.40 -1.80 16 9 C -0.17 -2.59 9.99 -39.54 -0.40 -2.98 16 10 C 0.14 2.57 7.34 -39.10 -0.29 2.29 16 11 F -0.14 -2.56 17.27 2.25 0.04 -2.52 16 12 N -0.45 -9.60 2.79 -112.43 -0.31 -9.91 16 13 C 0.21 4.54 4.75 -5.19 -0.02 4.52 16 14 C -0.55 -14.01 9.58 -34.44 -0.33 -14.34 16 15 H 0.08 2.41 8.06 -52.49 -0.42 1.99 16 16 C 0.08 2.16 5.47 -17.82 -0.10 2.06 16 17 N -0.88 -24.64 13.96 55.43 0.77 -23.86 16 18 Si 0.87 18.83 27.47 -169.99 -4.67 14.16 16 19 H -0.27 -5.79 7.11 56.52 0.40 -5.39 16 20 H -0.28 -6.04 7.11 56.52 0.40 -5.63 16 21 H -0.26 -5.35 6.54 56.52 0.37 -4.98 16 22 H 0.08 1.56 7.77 -51.93 -0.40 1.16 16 23 H 0.05 0.92 8.14 -51.93 -0.42 0.49 16 24 H 0.06 0.83 8.14 -51.92 -0.42 0.41 16 25 H 0.09 1.26 8.14 -51.93 -0.42 0.84 16 26 H 0.08 1.29 7.01 -51.93 -0.36 0.92 16 27 H 0.13 2.16 8.06 -52.49 -0.42 1.74 16 28 H 0.13 1.47 8.06 -52.49 -0.42 1.04 16 29 H 0.13 1.59 8.06 -52.49 -0.42 1.17 16 30 H 0.04 0.86 7.57 -51.93 -0.39 0.47 16 31 H 0.05 1.02 6.05 -51.93 -0.31 0.71 16 32 H 0.27 7.06 8.31 -40.82 -0.34 6.72 16 LS Contribution 281.39 15.07 4.24 4.24 Total: -1.00 -29.40 281.39 -7.64 -37.05 By element: Atomic # 1 Polarization: 5.25 SS G_CDS: -3.60 Total: 1.65 kcal Atomic # 6 Polarization: -5.84 SS G_CDS: -4.02 Total: -9.86 kcal Atomic # 7 Polarization: -45.08 SS G_CDS: 0.37 Total: -44.72 kcal Atomic # 9 Polarization: -2.56 SS G_CDS: 0.04 Total: -2.52 kcal Atomic # 14 Polarization: 18.83 SS G_CDS: -4.67 Total: 14.16 kcal Total LS contribution 4.24 Total: 4.24 kcal Total: -29.40 -7.64 -37.05 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260005385.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 49.406 kcal (2) G-P(sol) polarization free energy of solvation -29.404 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.002 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.644 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.049 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.358 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds