Wall clock time and date at job start Mon Mar 30 2020 06:20:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.50704 * 109.46807 * 2 1 4 4 N 1.30089 * 124.95391 * 270.17199 * 3 2 1 5 5 C 1.35831 * 109.64184 * 180.26839 * 4 3 2 6 6 C 1.39750 * 133.55408 * 179.76526 * 5 4 3 7 7 C 1.36583 * 119.91755 * 179.97438 * 6 5 4 8 8 C 1.38980 * 120.64430 * 359.97438 * 7 6 5 9 9 F 1.35100 * 119.79993 * 179.97438 * 8 7 6 10 10 C 1.38054 * 120.39599 * 0.02562 * 8 7 6 11 11 C 1.38832 * 119.67319 * 359.97438 * 10 8 7 12 12 N 1.36100 * 124.95375 * 90.00037 * 3 2 1 13 13 C 1.46491 * 126.34866 * 0.02562 * 12 3 2 14 14 C 1.50702 * 109.46957 * 269.70973 * 13 12 3 15 15 H 1.08002 * 120.00299 * 0.02562 * 14 13 12 16 16 C 1.37884 * 119.99942 * 179.72213 * 14 13 12 17 17 N 1.31514 * 119.99698 * 0.28408 * 16 14 13 18 18 Si 1.86794 * 119.99837 * 180.27476 * 16 14 13 19 19 H 1.48496 * 109.47341 * 0.02562 * 18 16 14 20 20 H 1.48508 * 109.46983 * 120.00379 * 18 16 14 21 21 H 1.48503 * 109.47491 * 240.00192 * 18 16 14 22 22 H 1.08995 * 109.47561 * 60.00385 * 1 2 3 23 23 H 1.09001 * 109.47058 * 180.02562 * 1 2 3 24 24 H 1.08998 * 109.47512 * 299.99898 * 1 2 3 25 25 H 1.08998 * 109.47512 * 240.00102 * 2 1 3 26 26 H 1.08998 * 109.47106 * 119.99416 * 2 1 3 27 27 H 1.08004 * 120.04008 * 359.95753 * 6 5 4 28 28 H 1.07991 * 119.67827 * 180.02562 * 7 6 5 29 29 H 1.07994 * 120.16496 * 180.02562 * 10 8 7 30 30 H 1.09004 * 109.47166 * 149.71239 * 13 12 3 31 31 H 1.08994 * 109.47507 * 29.70946 * 13 12 3 32 32 H 0.97005 * 119.99651 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0323 1.4209 0.0000 4 7 2.2776 2.1246 -1.0662 5 6 2.7209 3.3575 -0.7076 6 6 3.1240 4.4837 -1.4301 7 6 3.5284 5.6084 -0.7691 8 6 3.5436 5.6467 0.6201 9 9 3.9473 6.7679 1.2565 10 6 3.1495 4.5455 1.3536 11 6 2.7356 3.3945 0.6968 12 7 2.2921 2.1560 1.1155 13 6 2.1361 1.7131 2.5031 14 6 0.7451 2.0407 2.9816 15 1 0.0470 2.5295 2.3182 16 6 0.3617 1.7107 4.2642 17 7 1.2117 1.1150 5.0719 18 14 -1.3649 2.1098 4.8548 19 1 -2.1202 2.7747 3.7627 20 1 -2.0579 0.8549 5.2426 21 1 -1.2895 3.0166 6.0284 22 1 -0.3634 0.5137 -0.8899 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3634 0.5138 0.8900 25 1 1.8934 -0.5138 -0.8900 26 1 1.8933 -0.5137 0.8900 27 1 3.1159 4.4647 -2.5100 28 1 3.8387 6.4766 -1.3313 29 1 3.1624 4.5795 2.4329 30 1 2.8661 2.2233 3.1316 31 1 2.2961 0.6365 2.5611 32 1 0.9421 0.8832 5.9744 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260250040.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:20:38 Heat of formation + Delta-G solvation = 6.973800 kcal Electronic energy + Delta-G solvation = -17666.670930 eV Core-core repulsion = 14734.688590 eV Total energy + Delta-G solvation = -2931.982340 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 248.102 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -48.48274 -41.58096 -36.84804 -34.18548 -32.96709 -32.38301 -30.04914 -27.99802 -27.31848 -24.07407 -23.48114 -21.67691 -21.45434 -19.23792 -17.42220 -16.87867 -16.54866 -16.01678 -15.28873 -14.91227 -14.67203 -14.13492 -13.98782 -13.70270 -13.43072 -12.74417 -12.60831 -12.46990 -12.07849 -11.86255 -11.43753 -11.16311 -11.02693 -10.94855 -10.70674 -10.62993 -10.35261 -10.18472 -9.45054 -9.44185 -8.77919 -7.79560 -7.49999 -6.40389 -4.49280 1.27917 1.84976 3.11069 3.18658 3.21398 3.29145 3.46116 4.16411 4.18958 4.55825 4.70533 4.94103 4.99682 5.28601 5.44413 5.59618 5.68648 5.73189 5.84801 5.96358 6.11325 6.19211 6.29745 6.37198 6.47389 6.57425 6.70971 6.82139 6.98435 7.21040 7.32590 7.52132 7.71102 7.86216 8.45807 8.57721 9.18975 10.67187 Molecular weight = 248.10amu Principal moments of inertia in cm(-1) A = 0.018567 B = 0.008436 C = 0.006411 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1507.691127 B = 3318.398027 C = 4366.344896 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.040 4.040 3 C 0.292 3.708 4 N -0.514 5.514 5 C 0.032 3.968 6 C -0.045 4.045 7 C -0.167 4.167 8 C 0.091 3.909 9 F -0.144 7.144 10 C -0.126 4.126 11 C 0.074 3.926 12 N -0.452 5.452 13 C 0.235 3.765 14 C -0.541 4.541 15 H 0.066 0.934 16 C 0.069 3.931 17 N -0.887 5.887 18 Si 0.903 3.097 19 H -0.270 1.270 20 H -0.279 1.279 21 H -0.280 1.280 22 H 0.054 0.946 23 H 0.060 0.940 24 H 0.074 0.926 25 H 0.088 0.912 26 H 0.086 0.914 27 H 0.131 0.869 28 H 0.133 0.867 29 H 0.135 0.865 30 H 0.047 0.953 31 H 0.054 0.946 32 H 0.269 0.731 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.182 1.757 -7.952 8.431 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.079 4.079 3 C 0.027 3.973 4 N -0.235 5.235 5 C -0.089 4.089 6 C -0.064 4.064 7 C -0.188 4.188 8 C 0.070 3.930 9 F -0.123 7.123 10 C -0.148 4.148 11 C -0.039 4.039 12 N -0.137 5.137 13 C 0.117 3.883 14 C -0.579 4.579 15 H 0.084 0.916 16 C -0.135 4.135 17 N -0.525 5.525 18 Si 0.730 3.270 19 H -0.195 1.195 20 H -0.205 1.205 21 H -0.206 1.206 22 H 0.073 0.927 23 H 0.079 0.921 24 H 0.093 0.907 25 H 0.106 0.894 26 H 0.105 0.895 27 H 0.149 0.851 28 H 0.151 0.849 29 H 0.153 0.847 30 H 0.065 0.935 31 H 0.071 0.929 32 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges 2.098 1.372 -8.380 8.747 hybrid contribution -0.727 0.699 1.598 1.890 sum 1.371 2.072 -6.782 7.223 Atomic orbital electron populations 1.21735 0.93493 1.01992 1.03345 1.20054 0.97112 0.87021 1.03705 1.23529 0.96795 0.95965 0.81038 1.70357 1.22168 1.03135 1.27793 1.19128 1.05184 0.94125 0.90463 1.19656 0.97723 0.89712 0.99348 1.20410 1.06607 0.99671 0.92126 1.17075 1.02908 0.82860 0.90198 1.91450 1.88562 1.49779 1.82513 1.19816 1.03850 0.90592 1.00527 1.18469 1.02788 0.88307 0.94362 1.46040 1.48603 1.09148 1.09868 1.19796 0.98957 0.97081 0.72475 1.21286 0.96957 1.41121 0.98577 0.91603 1.24924 0.98230 0.94290 0.96082 1.69921 1.35163 1.39755 1.07611 0.86341 0.83317 0.78399 0.78967 1.19453 1.20479 1.20551 0.92672 0.92075 0.90693 0.89355 0.89540 0.85115 0.84936 0.84697 0.93470 0.92856 0.92148 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.31 9.89 37.16 0.37 -1.94 16 2 C -0.04 -0.65 6.23 -27.88 -0.17 -0.82 16 3 C 0.29 5.84 7.11 -154.78 -1.10 4.74 16 4 N -0.51 -10.47 11.27 -8.21 -0.09 -10.57 16 5 C 0.03 0.63 7.23 -84.68 -0.61 0.02 16 6 C -0.04 -0.73 10.05 -39.61 -0.40 -1.13 16 7 C -0.17 -2.55 9.94 -39.90 -0.40 -2.94 16 8 C 0.09 1.57 7.29 -39.37 -0.29 1.28 16 9 F -0.14 -2.43 17.26 2.25 0.04 -2.39 16 10 C -0.13 -2.47 10.03 -39.43 -0.40 -2.86 16 11 C 0.07 1.57 6.87 -84.00 -0.58 0.99 16 12 N -0.45 -9.86 2.79 -112.43 -0.31 -10.17 16 13 C 0.24 5.54 5.69 -5.20 -0.03 5.51 16 14 C -0.54 -13.81 9.02 -34.44 -0.31 -14.12 16 15 H 0.07 1.75 7.81 -52.49 -0.41 1.34 16 16 C 0.07 1.78 5.46 -17.82 -0.10 1.68 16 17 N -0.89 -23.70 13.29 55.43 0.74 -22.97 16 18 Si 0.90 20.16 29.54 -169.99 -5.02 15.14 16 19 H -0.27 -6.06 7.11 56.52 0.40 -5.65 16 20 H -0.28 -6.12 7.11 56.52 0.40 -5.72 16 21 H -0.28 -6.25 7.11 56.52 0.40 -5.85 16 22 H 0.05 0.85 8.14 -51.93 -0.42 0.42 16 23 H 0.06 0.79 8.14 -51.93 -0.42 0.37 16 24 H 0.07 1.38 7.77 -51.93 -0.40 0.98 16 25 H 0.09 1.23 8.14 -51.93 -0.42 0.80 16 26 H 0.09 1.39 7.01 -51.93 -0.36 1.02 16 27 H 0.13 1.78 8.06 -52.48 -0.42 1.36 16 28 H 0.13 1.59 8.06 -52.49 -0.42 1.17 16 29 H 0.14 2.64 8.06 -52.49 -0.42 2.22 16 30 H 0.05 1.17 8.14 -51.93 -0.42 0.75 16 31 H 0.05 1.26 6.99 -51.93 -0.36 0.90 16 32 H 0.27 6.80 8.31 -40.82 -0.34 6.46 16 LS Contribution 284.91 15.07 4.29 4.29 Total: -1.00 -27.67 284.91 -8.00 -35.67 By element: Atomic # 1 Polarization: 4.21 SS G_CDS: -3.63 Total: 0.57 kcal Atomic # 6 Polarization: -5.58 SS G_CDS: -4.01 Total: -9.59 kcal Atomic # 7 Polarization: -44.03 SS G_CDS: 0.33 Total: -43.70 kcal Atomic # 9 Polarization: -2.43 SS G_CDS: 0.04 Total: -2.39 kcal Atomic # 14 Polarization: 20.16 SS G_CDS: -5.02 Total: 15.14 kcal Total LS contribution 4.29 Total: 4.29 kcal Total: -27.67 -8.00 -35.67 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260250040.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.646 kcal (2) G-P(sol) polarization free energy of solvation -27.669 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.977 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.004 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.673 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.974 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds