Wall clock time and date at job start Mon Mar 30 2020 06:17:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.34248 * 125.03018 * 2 1 4 4 C 1.46481 * 107.00806 * 179.97438 * 3 2 1 5 5 C 1.39670 * 133.97524 * 179.97438 * 4 3 2 6 6 C 1.37793 * 119.63005 * 180.02562 * 5 4 3 7 7 F 1.35107 * 119.83397 * 179.97438 * 6 5 4 8 8 C 1.39035 * 120.33287 * 359.97438 * 6 5 4 9 9 C 1.50708 * 119.67283 * 179.97438 * 8 6 5 10 10 H 1.09001 * 109.46871 * 325.01737 * 9 8 6 11 11 N 1.46904 * 109.46770 * 205.01775 * 9 8 6 12 12 C 1.50703 * 109.47199 * 85.02319 * 9 8 6 13 13 H 1.08003 * 119.99763 * 359.97438 * 12 9 8 14 14 C 1.37875 * 119.99941 * 180.02562 * 12 9 8 15 15 N 1.31512 * 119.99800 * 359.97438 * 14 12 9 16 16 Si 1.86797 * 120.00011 * 179.97438 * 14 12 9 17 17 H 1.48499 * 109.47386 * 89.99424 * 16 14 12 18 18 H 1.48499 * 109.47251 * 209.99738 * 16 14 12 19 19 H 1.48503 * 109.46838 * 329.99297 * 16 14 12 20 20 C 1.37705 * 120.65063 * 359.97438 * 8 6 5 21 21 C 1.39095 * 119.95311 * 359.97438 * 20 8 6 22 22 N 1.36811 * 125.03514 * 180.22630 * 2 1 3 23 23 H 0.96993 * 125.07148 * 0.07821 * 22 2 1 24 24 H 1.09007 * 109.47364 * 90.02708 * 1 2 3 25 25 H 1.09001 * 109.47175 * 210.01909 * 1 2 3 26 26 H 1.09004 * 109.47445 * 330.02544 * 1 2 3 27 27 H 1.07998 * 126.49250 * 359.94569 * 3 2 1 28 28 H 1.08000 * 120.18398 * 0.02562 * 5 4 3 29 29 H 1.00895 * 110.99827 * 176.04600 * 11 9 8 30 30 H 1.00899 * 111.00074 * 299.99982 * 11 9 8 31 31 H 0.97001 * 119.99787 * 180.02562 * 15 14 12 32 32 H 1.08004 * 120.02958 * 180.02562 * 20 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2776 1.0993 0.0000 4 6 3.6705 0.6461 0.0006 5 6 4.9037 1.3019 0.0005 6 6 6.0675 0.5642 0.0007 7 9 7.2627 1.1943 0.0000 8 6 6.0182 -0.8253 0.0016 9 6 7.3003 -1.6174 0.0013 10 1 8.0515 -1.0923 -0.5888 11 7 7.0568 -2.9428 -0.5834 12 6 7.7934 -1.7756 1.4165 13 1 7.2345 -1.3453 2.2344 14 6 8.9586 -2.4689 1.6671 15 7 9.6393 -2.9924 0.6711 16 14 9.5702 -2.6644 3.4213 17 1 8.9996 -3.9029 4.0093 18 1 11.0525 -2.7536 3.4216 19 1 9.1447 -1.4920 4.2274 20 6 4.8093 -1.4848 0.0029 21 6 3.6225 -0.7595 0.0037 22 7 2.2924 -1.1202 -0.0044 23 1 1.9623 -2.0322 -0.0091 24 1 -0.3634 -0.0005 -1.0277 25 1 -0.3633 -0.8898 0.5141 26 1 -0.3634 0.8902 0.5134 27 1 1.9353 2.1236 -0.0008 28 1 4.9448 2.3811 0.0002 29 1 7.9143 -3.4699 -0.6542 30 1 6.3634 -3.4498 -0.0540 31 1 10.4589 -3.4804 0.8475 32 1 4.7827 -2.5645 0.0040 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261023292.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:17:27 Heat of formation + Delta-G solvation = 1.908443 kcal Electronic energy + Delta-G solvation = -17495.273042 eV Core-core repulsion = 14563.071052 eV Total energy + Delta-G solvation = -2932.201990 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 248.102 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -47.90804 -40.85682 -36.94079 -34.28474 -31.86296 -31.47988 -29.84453 -28.40808 -27.01076 -25.41744 -22.47858 -21.79010 -20.25715 -19.58267 -17.26649 -16.67240 -16.49439 -15.37305 -14.94379 -14.79127 -14.35636 -14.29638 -13.65027 -13.37963 -12.90742 -12.81148 -12.78959 -12.68225 -12.33512 -11.84797 -11.82777 -11.26870 -11.02844 -10.77939 -10.44468 -10.34995 -9.95649 -9.63891 -9.18624 -8.64089 -7.48949 -7.26389 -7.15222 -6.08157 -4.24356 1.54834 2.07751 2.96827 3.23475 3.31004 3.35130 3.36710 4.28339 4.42893 4.72762 5.05629 5.13516 5.19526 5.28176 5.39054 5.54945 5.67919 5.74453 5.78607 5.96960 6.20739 6.42801 6.55286 6.59162 6.90100 7.01894 7.12007 7.16755 7.58916 7.72076 7.75412 7.84429 8.06984 8.65297 8.90513 9.08096 9.46442 10.89848 Molecular weight = 248.10amu Principal moments of inertia in cm(-1) A = 0.031090 B = 0.006080 C = 0.005785 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 900.408265 B = 4604.123011 C = 4838.563798 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.089 4.089 2 C 0.067 3.933 3 C -0.204 4.204 4 C -0.103 4.103 5 C -0.125 4.125 6 C 0.083 3.917 7 F -0.138 7.138 8 C -0.039 4.039 9 C 0.243 3.757 10 H 0.055 0.945 11 N -0.849 5.849 12 C -0.540 4.540 13 H 0.056 0.944 14 C 0.067 3.933 15 N -0.893 5.893 16 Si 0.898 3.102 17 H -0.280 1.280 18 H -0.285 1.285 19 H -0.273 1.273 20 C -0.100 4.100 21 C 0.089 3.911 22 N -0.595 5.595 23 H 0.410 0.590 24 H 0.073 0.927 25 H 0.064 0.936 26 H 0.081 0.919 27 H 0.140 0.860 28 H 0.125 0.875 29 H 0.357 0.643 30 H 0.310 0.690 31 H 0.266 0.734 32 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.201 3.847 -1.320 15.736 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.041 4.041 3 C -0.230 4.230 4 C -0.107 4.107 5 C -0.144 4.144 6 C 0.062 3.938 7 F -0.116 7.116 8 C -0.042 4.042 9 C 0.133 3.867 10 H 0.073 0.927 11 N -0.379 5.379 12 C -0.580 4.580 13 H 0.074 0.926 14 C -0.136 4.136 15 N -0.532 5.532 16 Si 0.726 3.274 17 H -0.207 1.207 18 H -0.210 1.210 19 H -0.198 1.198 20 C -0.121 4.121 21 C -0.017 4.017 22 N -0.199 5.199 23 H 0.247 0.753 24 H 0.092 0.908 25 H 0.083 0.917 26 H 0.100 0.900 27 H 0.158 0.842 28 H 0.143 0.857 29 H 0.174 0.826 30 H 0.120 0.880 31 H 0.076 0.924 32 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -15.269 4.070 -2.030 15.932 hybrid contribution 0.890 -0.778 1.962 2.291 sum -14.379 3.291 -0.068 14.751 Atomic orbital electron populations 1.20410 0.88222 1.03301 1.02739 1.20174 0.93031 0.86128 1.04774 1.21291 0.90329 0.97341 1.14011 1.18704 0.92728 0.91915 1.07393 1.20220 0.89735 0.99366 1.05118 1.17261 0.80306 0.90311 1.05884 1.91458 1.43962 1.82133 1.94077 1.20213 0.97098 0.91682 0.95227 1.17907 0.87291 0.87499 0.94010 0.92729 1.59573 1.16111 1.06595 1.55622 1.21742 1.08335 1.34946 0.92953 0.92587 1.24999 0.95851 0.95166 0.97538 1.69739 1.16774 1.36039 1.30689 0.86486 0.77926 0.78508 0.84478 1.20659 1.21016 1.19778 1.19637 0.87890 0.99504 1.05090 1.18288 0.84344 0.94027 1.05013 1.41637 1.04111 1.07756 1.66389 0.75334 0.90839 0.91655 0.90041 0.84206 0.85659 0.82636 0.88028 0.92433 0.85393 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.71 10.39 36.00 0.37 -0.33 16 2 C 0.07 0.84 7.08 -81.78 -0.58 0.26 16 3 C -0.20 -2.94 10.95 -37.67 -0.41 -3.35 16 4 C -0.10 -1.84 6.37 -105.14 -0.67 -2.51 16 5 C -0.12 -2.34 10.07 -39.21 -0.40 -2.74 16 6 C 0.08 1.81 7.23 -39.45 -0.29 1.53 16 7 F -0.14 -3.17 16.53 2.25 0.04 -3.14 16 8 C -0.04 -0.90 5.00 -104.52 -0.52 -1.42 16 9 C 0.24 6.23 2.71 -70.01 -0.19 6.05 16 10 H 0.05 1.57 7.77 -51.93 -0.40 1.17 16 11 N -0.85 -20.21 8.78 -6.64 -0.06 -20.27 16 12 C -0.54 -14.86 8.71 -34.44 -0.30 -15.16 16 13 H 0.06 1.57 7.74 -52.48 -0.41 1.17 16 14 C 0.07 1.83 5.38 -17.82 -0.10 1.73 16 15 N -0.89 -24.85 11.54 55.43 0.64 -24.21 16 16 Si 0.90 21.30 29.54 -169.99 -5.02 16.28 16 17 H -0.28 -6.54 7.11 56.52 0.40 -6.14 16 18 H -0.28 -6.69 7.11 56.52 0.40 -6.29 16 19 H -0.27 -6.52 7.11 56.52 0.40 -6.12 16 20 C -0.10 -1.99 9.27 -39.46 -0.37 -2.36 16 21 C 0.09 1.58 7.27 -83.95 -0.61 0.97 16 22 N -0.59 -8.18 6.08 -6.94 -0.04 -8.22 16 23 H 0.41 4.40 8.96 -40.82 -0.37 4.03 16 24 H 0.07 0.50 8.14 -51.93 -0.42 0.08 16 25 H 0.06 0.44 8.14 -51.93 -0.42 0.01 16 26 H 0.08 0.55 8.14 -51.93 -0.42 0.12 16 27 H 0.14 1.66 8.06 -52.49 -0.42 1.24 16 28 H 0.13 2.03 8.06 -52.49 -0.42 1.60 16 29 H 0.36 9.10 7.08 -39.29 -0.28 8.82 16 30 H 0.31 6.88 7.17 -39.29 -0.28 6.60 16 31 H 0.27 7.05 8.31 -40.82 -0.34 6.71 16 32 H 0.13 2.40 6.24 -52.48 -0.33 2.07 16 LS Contribution 278.03 15.07 4.19 4.19 Total: -1.00 -30.02 278.03 -7.62 -37.64 By element: Atomic # 1 Polarization: 18.39 SS G_CDS: -3.31 Total: 15.08 kcal Atomic # 6 Polarization: -13.29 SS G_CDS: -4.05 Total: -17.34 kcal Atomic # 7 Polarization: -53.25 SS G_CDS: 0.54 Total: -52.71 kcal Atomic # 9 Polarization: -3.17 SS G_CDS: 0.04 Total: -3.14 kcal Atomic # 14 Polarization: 21.30 SS G_CDS: -5.02 Total: 16.28 kcal Total LS contribution 4.19 Total: 4.19 kcal Total: -30.02 -7.62 -37.64 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261023292.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.549 kcal (2) G-P(sol) polarization free energy of solvation -30.022 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.527 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.618 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.641 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.908 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds