Wall clock time and date at job start Mon Mar 30 2020 06:33:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.36880 * 125.06274 * 2 1 4 4 C 1.34211 * 109.92064 * 180.19843 * 3 2 1 5 5 C 1.46511 * 106.98926 * 359.63018 * 4 3 2 6 6 C 1.37702 * 125.06342 * 179.78826 * 2 1 3 7 7 C 1.39130 * 133.40926 * 359.97438 * 6 2 1 8 8 C 1.37749 * 119.96059 * 180.02562 * 7 6 2 9 9 C 1.38789 * 120.69911 * 359.95577 * 8 7 6 10 10 C 1.50697 * 119.82909 * 180.02562 * 9 8 7 11 11 H 1.08997 * 109.47611 * 219.97370 * 10 9 8 12 12 N 1.46899 * 109.47154 * 339.97822 * 10 9 8 13 13 C 1.50700 * 109.46938 * 99.97426 * 10 9 8 14 14 H 1.08003 * 120.00235 * 0.02562 * 13 10 9 15 15 C 1.37882 * 119.99810 * 180.02562 * 13 10 9 16 16 N 1.31511 * 119.99749 * 179.97438 * 15 13 10 17 17 Si 1.86800 * 120.00029 * 0.02562 * 15 13 10 18 18 H 1.48496 * 109.47242 * 89.99939 * 17 15 13 19 19 H 1.48502 * 109.46792 * 209.99880 * 17 15 13 20 20 H 1.48500 * 109.47079 * 329.99555 * 17 15 13 21 21 C 1.37871 * 120.34942 * 359.97438 * 9 8 7 22 22 F 1.35099 * 120.19441 * 180.02562 * 21 9 8 23 23 H 1.09005 * 109.46809 * 270.21085 * 1 2 3 24 24 H 1.09000 * 109.47037 * 30.21070 * 1 2 3 25 25 H 1.09002 * 109.47286 * 150.21387 * 1 2 3 26 26 H 1.07999 * 125.04274 * 0.09471 * 3 2 1 27 27 H 1.08002 * 126.50915 * 179.89952 * 4 3 2 28 28 H 1.07993 * 120.01941 * 0.02728 * 7 6 2 29 29 H 1.08009 * 119.65191 * 179.97438 * 8 7 6 30 30 H 1.00910 * 111.00058 * 59.99582 * 12 10 9 31 31 H 1.00890 * 111.00283 * 183.95129 * 12 10 9 32 32 H 0.97000 * 120.00218 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2514 1.1204 0.0000 4 6 3.5469 0.7698 -0.0044 5 6 3.5941 -0.6945 0.0016 6 6 2.2561 -1.1271 0.0042 7 6 1.9781 -2.4903 0.0097 8 6 3.0100 -3.4029 0.0134 9 6 4.3313 -2.9783 0.0109 10 6 5.4449 -3.9936 0.0145 11 1 6.2444 -3.6538 0.6728 12 7 4.9303 -5.2831 0.4944 13 6 5.9811 -4.1561 -1.3845 14 1 5.5581 -3.5812 -2.1951 15 6 7.0117 -5.0386 -1.6296 16 7 7.4792 -5.1807 -2.8506 17 14 7.7428 -6.0334 -0.2277 18 1 7.0070 -7.3163 -0.0947 19 1 9.1739 -6.3106 -0.5114 20 1 7.6290 -5.2639 1.0372 21 6 4.6306 -1.6325 0.0040 22 9 5.9179 -1.2227 0.0010 23 1 -0.3633 0.0038 1.0277 24 1 -0.3633 0.8881 -0.5171 25 1 -0.3634 -0.8919 -0.5105 26 1 1.8839 2.1359 0.0015 27 1 4.3939 1.4399 -0.0070 28 1 0.9539 -2.8329 0.0109 29 1 2.7884 -4.4600 0.0181 30 1 4.1873 -5.6197 -0.0998 31 1 5.6714 -5.9637 0.5673 32 1 8.2045 -5.8013 -3.0230 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261026738.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:33:30 Heat of formation + Delta-G solvation = 27.659029 kcal Electronic energy + Delta-G solvation = -17714.059226 eV Core-core repulsion = 14782.973864 eV Total energy + Delta-G solvation = -2931.085361 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 248.102 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -47.93934 -40.90428 -37.22472 -34.33667 -32.57446 -31.73269 -29.43460 -28.29673 -26.61508 -25.61528 -22.73060 -22.04273 -19.94496 -19.75910 -17.23142 -17.10458 -16.44643 -15.70463 -15.31428 -14.81054 -14.59081 -14.47074 -14.28262 -13.58278 -13.21441 -12.77749 -12.53252 -12.48055 -12.41451 -12.26610 -11.75098 -11.56556 -10.96611 -10.74709 -10.70269 -10.30335 -10.07699 -9.49397 -9.07642 -8.72436 -7.84463 -7.54325 -7.01328 -6.17120 -4.19952 1.48281 2.06149 2.94733 2.95914 3.16730 3.32105 3.33791 4.28336 4.28755 4.71364 4.83984 5.01845 5.10043 5.13643 5.17119 5.31435 5.49555 5.56523 5.72824 5.83844 6.07172 6.17607 6.25451 6.57198 6.76519 6.93105 6.97697 7.09622 7.29527 7.48484 7.51902 7.64290 8.09072 8.29922 8.52491 8.90199 9.41776 10.95739 Molecular weight = 248.10amu Principal moments of inertia in cm(-1) A = 0.038159 B = 0.006529 C = 0.006079 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 733.598201 B = 4287.583000 C = 4604.846489 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.084 3.916 2 N -0.493 5.493 3 C 0.037 3.963 4 C -0.191 4.191 5 C -0.146 4.146 6 C 0.109 3.891 7 C -0.153 4.153 8 C -0.054 4.054 9 C -0.085 4.085 10 C 0.213 3.787 11 H 0.053 0.947 12 N -0.848 5.848 13 C -0.540 4.540 14 H 0.076 0.924 15 C 0.073 3.927 16 N -0.890 5.890 17 Si 0.872 3.128 18 H -0.275 1.275 19 H -0.290 1.290 20 H -0.258 1.258 21 C 0.142 3.858 22 F -0.132 7.132 23 H 0.064 0.936 24 H 0.078 0.922 25 H 0.079 0.921 26 H 0.165 0.835 27 H 0.145 0.855 28 H 0.116 0.884 29 H 0.136 0.864 30 H 0.331 0.669 31 H 0.319 0.681 32 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.371 8.830 6.450 17.273 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 N -0.179 5.179 3 C -0.087 4.087 4 C -0.216 4.216 5 C -0.151 4.151 6 C 0.004 3.996 7 C -0.174 4.174 8 C -0.073 4.073 9 C -0.088 4.088 10 C 0.104 3.896 11 H 0.071 0.929 12 N -0.382 5.382 13 C -0.580 4.580 14 H 0.094 0.906 15 C -0.130 4.130 16 N -0.528 5.528 17 Si 0.701 3.299 18 H -0.201 1.201 19 H -0.217 1.217 20 H -0.183 1.183 21 C 0.121 3.879 22 F -0.110 7.110 23 H 0.083 0.917 24 H 0.097 0.903 25 H 0.097 0.903 26 H 0.182 0.818 27 H 0.162 0.838 28 H 0.134 0.866 29 H 0.153 0.847 30 H 0.143 0.857 31 H 0.135 0.865 32 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges -13.726 9.192 7.000 17.942 hybrid contribution 1.018 -0.791 -0.449 1.365 sum -12.708 8.401 6.551 16.583 Atomic orbital electron populations 1.21841 0.77598 1.03850 1.02521 1.43698 1.05485 1.04259 1.64417 1.21626 0.90326 0.90821 1.05954 1.21564 0.95977 0.92512 1.11567 1.19009 0.91928 0.93634 1.10552 1.17882 0.88960 0.88171 1.04598 1.19907 0.99281 0.88846 1.09376 1.20529 0.90453 0.99369 0.96970 1.19829 0.96090 0.92161 1.00690 1.18295 0.90310 0.85459 0.95532 0.92905 1.59747 1.14747 1.06401 1.57283 1.21592 1.18465 1.24750 0.93160 0.90627 1.25018 0.95779 0.96734 0.95483 1.69895 1.26796 1.36475 1.19606 0.87019 0.78630 0.80781 0.83506 1.20142 1.21716 1.18305 1.16808 0.77302 0.91055 1.02693 1.91450 1.35150 1.90939 1.93476 0.91718 0.90319 0.90254 0.81801 0.83754 0.86573 0.84651 0.85664 0.86545 0.92437 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.71 11.02 59.85 0.66 1.37 16 2 N -0.49 -6.62 3.18 -121.80 -0.39 -7.00 16 3 C 0.04 0.47 11.29 -16.72 -0.19 0.28 16 4 C -0.19 -3.02 11.08 -37.67 -0.42 -3.44 16 5 C -0.15 -2.82 6.36 -105.09 -0.67 -3.49 16 6 C 0.11 1.85 6.80 -84.00 -0.57 1.28 16 7 C -0.15 -2.51 9.95 -39.43 -0.39 -2.90 16 8 C -0.05 -1.01 9.22 -39.56 -0.36 -1.38 16 9 C -0.09 -1.90 5.03 -104.55 -0.53 -2.42 16 10 C 0.21 5.25 2.18 -70.02 -0.15 5.10 16 11 H 0.05 1.39 6.99 -51.93 -0.36 1.03 16 12 N -0.85 -18.67 8.62 -6.65 -0.06 -18.73 16 13 C -0.54 -15.38 9.28 -34.44 -0.32 -15.70 16 14 H 0.08 2.39 7.98 -52.48 -0.42 1.97 16 15 C 0.07 2.11 5.47 -17.82 -0.10 2.01 16 16 N -0.89 -27.20 13.96 55.43 0.77 -26.43 16 17 Si 0.87 21.31 24.61 -169.99 -4.18 17.12 16 18 H -0.27 -6.35 7.01 56.52 0.40 -5.95 16 19 H -0.29 -7.14 7.11 56.52 0.40 -6.74 16 20 H -0.26 -6.21 6.54 56.52 0.37 -5.84 16 21 C 0.14 3.14 7.27 -39.14 -0.28 2.85 16 22 F -0.13 -3.09 16.65 2.25 0.04 -3.05 16 23 H 0.06 0.47 8.14 -51.93 -0.42 0.05 16 24 H 0.08 0.48 8.14 -51.93 -0.42 0.06 16 25 H 0.08 0.63 8.10 -51.93 -0.42 0.21 16 26 H 0.16 1.38 8.06 -52.49 -0.42 0.96 16 27 H 0.14 2.04 8.06 -52.49 -0.42 1.62 16 28 H 0.12 1.51 8.06 -52.49 -0.42 1.08 16 29 H 0.14 2.32 6.21 -52.48 -0.33 1.99 16 30 H 0.33 6.74 7.26 -39.29 -0.29 6.45 16 31 H 0.32 7.16 4.29 -39.30 -0.17 6.99 16 32 H 0.27 7.59 8.31 -40.82 -0.34 7.25 16 LS Contribution 272.24 15.07 4.10 4.10 Total: -1.00 -32.99 272.24 -6.31 -39.30 By element: Atomic # 1 Polarization: 14.39 SS G_CDS: -3.27 Total: 11.12 kcal Atomic # 6 Polarization: -13.11 SS G_CDS: -3.32 Total: -16.44 kcal Atomic # 7 Polarization: -52.49 SS G_CDS: 0.33 Total: -52.16 kcal Atomic # 9 Polarization: -3.09 SS G_CDS: 0.04 Total: -3.05 kcal Atomic # 14 Polarization: 21.31 SS G_CDS: -4.18 Total: 17.12 kcal Total LS contribution 4.10 Total: 4.10 kcal Total: -32.99 -6.31 -39.30 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261026738.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 66.960 kcal (2) G-P(sol) polarization free energy of solvation -32.994 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.965 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.306 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.301 kcal (6) G-S(sol) free energy of system = (1) + (5) 27.659 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds