Wall clock time and date at job start Mon Mar 30 2020 06:32:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 N 1.46497 * 109.47234 * 2 1 4 4 C 1.36939 * 119.99926 * 263.51194 * 3 2 1 5 5 H 1.07999 * 120.00032 * 190.68607 * 4 3 2 6 6 C 1.38809 * 120.00305 * 10.69010 * 4 3 2 7 7 N 1.31622 * 119.99934 * 14.62810 * 6 4 3 8 8 Si 1.86793 * 120.00488 * 194.62594 * 6 4 3 9 9 H 1.48506 * 109.47164 * 89.99794 * 8 6 4 10 10 H 1.48503 * 109.47625 * 210.00161 * 8 6 4 11 11 H 1.48500 * 109.47036 * 330.00376 * 8 6 4 12 12 C 1.46499 * 119.99975 * 83.51134 * 3 2 1 13 13 C 1.50696 * 109.47144 * 83.63982 * 12 3 2 14 14 C 1.37912 * 120.06792 * 261.91213 * 13 12 3 15 15 C 1.38399 * 120.21816 * 180.25757 * 14 13 12 16 16 C 1.38275 * 120.34543 * 359.78560 * 15 14 13 17 17 C 1.38237 * 120.12767 * 359.97438 * 16 15 14 18 18 F 1.35094 * 120.11469 * 179.97438 * 17 16 15 19 19 C 1.39647 * 120.06340 * 81.69967 * 13 12 3 20 20 C 1.43208 * 120.16845 * 359.97438 * 19 13 12 21 21 N 5.16896 * 125.84460 * 355.38361 * 2 1 3 22 22 H 1.09001 * 109.46875 * 302.38616 * 1 2 3 23 23 H 1.09002 * 109.47000 * 62.39012 * 1 2 3 24 24 H 1.08997 * 109.46874 * 182.38372 * 1 2 3 25 25 H 1.09005 * 109.47019 * 239.99759 * 2 1 3 26 26 H 1.09000 * 109.47170 * 120.00632 * 2 1 3 27 27 H 0.97000 * 120.00052 * 179.97438 * 7 6 4 28 28 H 1.08998 * 109.46807 * 323.63729 * 12 3 2 29 29 H 1.08997 * 109.46785 * 203.64344 * 12 3 2 30 30 H 1.08002 * 119.89030 * 0.02562 * 14 13 12 31 31 H 1.07997 * 119.82802 * 179.76010 * 15 14 13 32 32 H 1.08003 * 119.93596 * 180.02562 * 16 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 7 2.0184 1.3812 0.0000 4 6 2.3730 1.9820 -1.1783 5 1 2.8917 2.9293 -1.1668 6 6 2.0657 1.3737 -2.3876 7 7 1.1969 0.3857 -2.4253 8 14 2.8852 1.9572 -3.9615 9 1 4.1393 1.1924 -4.1796 10 1 1.9668 1.7393 -5.1081 11 1 3.2010 3.4038 -3.8483 12 6 2.1274 2.1196 1.2606 13 6 3.4337 1.7795 1.9306 14 6 3.4702 0.8334 2.9333 15 6 4.6673 0.5225 3.5544 16 6 5.8369 1.1537 3.1727 17 6 5.8176 2.1007 2.1659 18 9 6.9603 2.7176 1.7936 19 6 4.6104 2.4187 1.5343 20 6 4.5807 3.3985 0.4903 21 7 4.5569 4.1764 -0.3372 22 1 -0.3633 0.5505 0.8678 23 1 -0.3633 0.4763 -0.9107 24 1 -0.3633 -1.0268 0.0427 25 1 1.8934 -0.5139 -0.8900 26 1 1.8934 -0.5139 0.8899 27 1 0.9819 -0.0391 -3.2704 28 1 1.3007 1.8444 1.9155 29 1 2.0903 3.1901 1.0589 30 1 2.5610 0.3361 3.2374 31 1 4.6880 -0.2166 4.3416 32 1 6.7675 0.9057 3.6616 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000362297677.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:32:11 Heat of formation + Delta-G solvation = 42.003768 kcal Electronic energy + Delta-G solvation = -17888.595769 eV Core-core repulsion = 14958.132442 eV Total energy + Delta-G solvation = -2930.463327 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 248.102 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -48.83804 -39.23132 -36.13820 -35.73083 -32.35504 -30.90471 -30.38507 -29.04688 -25.97628 -23.61182 -23.37029 -21.66955 -20.17810 -18.55215 -17.11080 -16.57268 -16.26613 -15.63931 -15.12066 -14.85985 -13.83300 -13.71025 -13.65017 -13.13341 -13.04758 -12.77408 -12.42198 -12.08281 -11.74462 -11.65042 -11.61455 -11.22405 -11.13317 -10.84173 -10.63124 -10.44300 -9.95806 -9.73565 -9.45406 -8.69171 -8.54810 -8.42233 -6.95048 -5.74790 -3.16433 0.92444 1.34147 3.21016 3.28719 3.40165 3.45939 3.51942 4.04231 4.23358 4.35565 4.51185 4.84323 5.05764 5.31523 5.36486 5.43784 5.54001 5.82919 5.95626 6.09939 6.18305 6.39752 6.45048 6.57978 6.70976 6.86154 6.93594 7.00524 7.13129 7.68632 7.81245 8.03430 8.08435 8.37345 9.21544 9.79157 10.20645 11.24399 Molecular weight = 248.10amu Principal moments of inertia in cm(-1) A = 0.021095 B = 0.009259 C = 0.007126 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1327.021842 B = 3023.361787 C = 3928.574393 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C 0.158 3.842 3 N -0.584 5.584 4 C -0.253 4.253 5 H 0.083 0.917 6 C -0.001 4.001 7 N -0.901 5.901 8 Si 0.897 3.103 9 H -0.288 1.288 10 H -0.290 1.290 11 H -0.277 1.277 12 C 0.172 3.828 13 C -0.010 4.010 14 C -0.127 4.127 15 C -0.068 4.068 16 C -0.172 4.172 17 C 0.136 3.864 18 F -0.136 7.136 19 C -0.046 4.046 20 C 0.262 3.738 21 N -0.406 5.406 22 H 0.010 0.990 23 H 0.083 0.917 24 H 0.021 0.979 25 H 0.105 0.895 26 H 0.001 0.999 27 H 0.251 0.749 28 H 0.058 0.942 29 H 0.061 0.939 30 H 0.134 0.866 31 H 0.133 0.867 32 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.869 -1.736 13.228 14.202 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C 0.034 3.966 3 N -0.303 5.303 4 C -0.382 4.382 5 H 0.101 0.899 6 C -0.198 4.198 7 N -0.548 5.548 8 Si 0.728 3.272 9 H -0.215 1.215 10 H -0.216 1.216 11 H -0.203 1.203 12 C 0.043 3.957 13 C -0.017 4.017 14 C -0.146 4.146 15 C -0.087 4.087 16 C -0.191 4.191 17 C 0.115 3.885 18 F -0.114 7.114 19 C -0.051 4.051 20 C -0.053 4.053 21 N -0.081 5.081 22 H 0.029 0.971 23 H 0.102 0.898 24 H 0.040 0.960 25 H 0.123 0.877 26 H 0.019 0.981 27 H 0.062 0.938 28 H 0.077 0.923 29 H 0.080 0.920 30 H 0.152 0.848 31 H 0.151 0.849 32 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 4.775 -0.583 11.704 12.654 hybrid contribution 0.674 -0.093 -0.669 0.954 sum 5.449 -0.676 11.035 12.326 Atomic orbital electron populations 1.22242 0.99270 0.97845 1.00931 1.21072 0.92363 0.84118 0.99085 1.44186 1.74455 1.11249 1.00437 1.19654 1.30606 1.04591 0.83332 0.89926 1.24754 0.98435 0.98988 0.97587 1.70080 1.33374 1.26850 1.24492 0.86315 0.79001 0.78731 0.83197 1.21516 1.21646 1.20262 1.19891 0.90005 0.96897 0.88874 1.21386 0.96924 0.92021 0.91402 1.21067 0.98576 0.98218 0.96743 1.21139 0.91572 0.97553 0.98450 1.20891 1.00304 0.98782 0.99122 1.17678 0.80564 0.94322 0.95974 1.91502 1.48029 1.81281 1.90589 1.15912 0.93481 0.99184 0.96567 1.25071 0.94065 0.93069 0.93091 1.81128 1.06680 1.11396 1.08905 0.97123 0.89784 0.95995 0.87709 0.98122 0.93805 0.92349 0.92031 0.84793 0.84889 0.84505 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -3.16 9.75 37.16 0.36 -2.80 16 2 C 0.16 3.62 5.61 -4.04 -0.02 3.60 16 3 N -0.58 -13.79 2.52 -174.61 -0.44 -14.23 16 4 C -0.25 -6.80 9.12 -15.06 -0.14 -6.94 16 5 H 0.08 2.25 5.08 -52.49 -0.27 1.99 16 6 C 0.00 -0.03 5.14 -17.43 -0.09 -0.12 16 7 N -0.90 -24.88 8.17 55.49 0.45 -24.42 16 8 Si 0.90 22.73 29.58 -169.99 -5.03 17.70 16 9 H -0.29 -7.34 7.11 56.52 0.40 -6.94 16 10 H -0.29 -7.29 7.11 56.52 0.40 -6.89 16 11 H -0.28 -7.17 7.11 56.52 0.40 -6.77 16 12 C 0.17 3.29 5.37 -5.20 -0.03 3.26 16 13 C -0.01 -0.17 5.48 -104.22 -0.57 -0.75 16 14 C -0.13 -1.66 9.65 -39.64 -0.38 -2.04 16 15 C -0.07 -0.74 10.04 -39.51 -0.40 -1.13 16 16 C -0.17 -2.02 10.01 -39.57 -0.40 -2.41 16 17 C 0.14 2.06 7.28 -38.96 -0.28 1.78 16 18 F -0.14 -2.14 16.81 2.25 0.04 -2.10 16 19 C -0.05 -0.81 5.74 -106.82 -0.61 -1.42 16 20 C 0.26 5.38 11.92 -22.47 -0.27 5.11 16 21 N -0.41 -9.14 17.14 41.84 0.72 -8.42 16 22 H 0.01 0.20 7.97 -51.93 -0.41 -0.21 16 23 H 0.08 2.13 6.45 -51.93 -0.34 1.80 16 24 H 0.02 0.43 8.14 -51.93 -0.42 0.01 16 25 H 0.11 2.75 5.60 -51.93 -0.29 2.46 16 26 H 0.00 0.01 8.12 -51.93 -0.42 -0.41 16 27 H 0.25 6.83 8.31 -40.82 -0.34 6.49 16 28 H 0.06 1.00 7.83 -51.93 -0.41 0.59 16 29 H 0.06 1.23 7.26 -51.93 -0.38 0.86 16 30 H 0.13 1.52 8.05 -52.49 -0.42 1.09 16 31 H 0.13 0.98 8.06 -52.49 -0.42 0.56 16 32 H 0.14 1.23 8.06 -52.48 -0.42 0.80 16 LS Contribution 279.58 15.07 4.21 4.21 Total: -1.00 -29.49 279.58 -6.21 -35.70 By element: Atomic # 1 Polarization: -1.24 SS G_CDS: -3.34 Total: -4.58 kcal Atomic # 6 Polarization: -1.03 SS G_CDS: -2.83 Total: -3.85 kcal Atomic # 7 Polarization: -47.80 SS G_CDS: 0.73 Total: -47.07 kcal Atomic # 9 Polarization: -2.14 SS G_CDS: 0.04 Total: -2.10 kcal Atomic # 14 Polarization: 22.73 SS G_CDS: -5.03 Total: 17.70 kcal Total LS contribution 4.21 Total: 4.21 kcal Total: -29.49 -6.21 -35.70 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000362297677.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 77.699 kcal (2) G-P(sol) polarization free energy of solvation -29.486 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 48.213 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.210 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.696 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.004 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds