Wall clock time and date at job start Mon Mar 30 2020 06:28:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 H 1.09007 * 109.46734 * 2 1 4 4 C 1.53004 * 109.47161 * 240.00641 * 2 1 3 5 5 C 1.50701 * 109.47211 * 175.00101 * 4 2 1 6 6 H 1.08002 * 119.99761 * 359.97438 * 5 4 2 7 7 C 1.37871 * 119.99694 * 180.27574 * 5 4 2 8 8 N 1.31523 * 119.99908 * 179.72112 * 7 5 4 9 9 Si 1.86800 * 120.00405 * 359.71709 * 7 5 4 10 10 H 1.48500 * 109.47210 * 90.00069 * 9 7 5 11 11 H 1.48504 * 109.47424 * 210.00300 * 9 7 5 12 12 H 1.48502 * 109.46888 * 330.00390 * 9 7 5 13 13 N 1.46500 * 109.47481 * 120.00080 * 2 1 3 14 14 C 1.39694 * 120.00002 * 275.00160 * 13 2 1 15 15 C 1.38986 * 119.98738 * 359.72125 * 14 13 2 16 16 C 1.38425 * 120.20799 * 179.76353 * 15 14 13 17 17 F 1.35103 * 119.90855 * 180.27825 * 16 15 14 18 18 C 1.38245 * 120.18103 * 0.51394 * 16 15 14 19 19 C 1.39617 * 119.96905 * 359.74372 * 18 16 15 20 20 C 1.43201 * 120.10198 * 180.02562 * 19 18 16 21 21 N 7.23312 * 106.63565 * 99.53958 * 2 1 3 22 22 C 1.38635 * 119.98516 * 179.97438 * 14 13 2 23 23 H 1.09001 * 109.47261 * 59.99525 * 1 2 3 24 24 H 1.09000 * 109.46927 * 179.97438 * 1 2 3 25 25 H 1.09004 * 109.46944 * 299.99471 * 1 2 3 26 26 H 1.09000 * 109.47211 * 54.99128 * 4 2 1 27 27 H 1.09007 * 109.46376 * 294.99670 * 4 2 1 28 28 H 0.96995 * 120.00181 * 179.97438 * 8 7 5 29 29 H 0.96997 * 119.99537 * 95.00208 * 13 2 1 30 30 H 1.08000 * 119.89336 * 0.02562 * 15 14 13 31 31 H 1.07998 * 120.01856 * 179.76767 * 18 16 15 32 32 H 1.08005 * 120.09049 * 359.97438 * 22 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8932 1.0278 0.0000 4 6 2.0400 -0.7211 -1.2494 5 6 3.5419 -0.6148 -1.3128 6 1 4.0789 -0.0854 -0.5396 7 6 4.2298 -1.1880 -2.3612 8 7 5.5401 -1.0905 -2.4195 9 14 3.3009 -2.1031 -3.6988 10 1 2.9338 -1.1567 -4.7827 11 1 4.1620 -3.1793 -4.2519 12 1 2.0685 -2.7009 -3.1252 13 7 2.0184 -0.6906 1.1961 14 6 2.1518 0.0063 2.3995 15 6 1.8266 1.3562 2.4602 16 6 1.9524 2.0500 3.6514 17 9 1.6293 3.3607 3.7050 18 6 2.4125 1.4065 4.7852 19 6 2.7464 0.0519 4.7314 20 6 3.2227 -0.6175 5.9042 21 7 3.6007 -1.1486 6.8345 22 6 2.6135 -0.6477 3.5313 23 1 -0.3634 0.5139 -0.8899 24 1 -0.3633 -1.0277 -0.0005 25 1 -0.3633 0.5138 0.8901 26 1 1.6052 -0.2616 -2.1370 27 1 1.7516 -1.7714 -1.2057 28 1 6.0241 -1.4941 -3.1568 29 1 2.2491 -1.6317 1.1525 30 1 1.4706 1.8644 1.5762 31 1 2.5132 1.9513 5.7123 32 1 2.8700 -1.6958 3.4844 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000718638622.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:28:34 Heat of formation + Delta-G solvation = 0.798361 kcal Electronic energy + Delta-G solvation = -16945.776055 eV Core-core repulsion = 14013.525928 eV Total energy + Delta-G solvation = -2932.250127 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 248.102 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -48.82745 -39.52340 -37.10246 -35.91105 -33.02628 -31.68854 -30.86105 -28.26651 -28.04007 -24.24601 -23.08966 -22.12895 -20.27828 -18.92653 -16.87376 -16.58203 -16.32128 -16.15888 -15.54923 -15.32194 -14.74058 -14.32832 -13.92361 -13.52305 -13.29578 -13.21557 -12.85729 -12.50755 -12.42994 -12.06695 -11.88690 -11.87166 -11.77768 -11.31060 -10.96048 -10.65852 -10.09874 -9.93065 -9.66973 -9.33578 -8.78258 -8.67704 -7.26427 -6.16163 -4.16338 0.76116 1.42119 2.60152 2.96625 3.20125 3.29141 3.29595 3.52093 3.87778 3.94525 4.32450 4.44246 5.04368 5.11074 5.15798 5.18387 5.38213 5.45464 5.66482 5.78563 5.84811 6.11103 6.14425 6.19762 6.21597 6.31610 6.48697 6.72746 6.90146 7.02221 7.41420 7.57896 7.64520 8.05731 8.38352 8.89612 9.44651 10.96689 Molecular weight = 248.10amu Principal moments of inertia in cm(-1) A = 0.023827 B = 0.005478 C = 0.004988 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1174.848114 B = 5109.873153 C = 5612.022975 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C 0.152 3.848 3 H 0.077 0.923 4 C -0.021 4.021 5 C -0.523 4.523 6 H 0.076 0.924 7 C 0.069 3.931 8 N -0.898 5.898 9 Si 0.877 3.123 10 H -0.277 1.277 11 H -0.288 1.288 12 H -0.266 1.266 13 N -0.705 5.705 14 C 0.264 3.736 15 C -0.215 4.215 16 C 0.150 3.850 17 F -0.138 7.138 18 C -0.186 4.186 19 C 0.045 3.955 20 C 0.265 3.735 21 N -0.422 5.422 22 C -0.165 4.165 23 H 0.062 0.938 24 H 0.054 0.946 25 H 0.050 0.950 26 H 0.028 0.972 27 H 0.022 0.978 28 H 0.264 0.736 29 H 0.407 0.593 30 H 0.142 0.858 31 H 0.135 0.865 32 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.931 3.333 8.553 13.523 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.228 4.228 2 C 0.047 3.953 3 H 0.095 0.905 4 C -0.059 4.059 5 C -0.561 4.561 6 H 0.094 0.906 7 C -0.133 4.133 8 N -0.536 5.536 9 Si 0.705 3.295 10 H -0.202 1.202 11 H -0.214 1.214 12 H -0.191 1.191 13 N -0.327 5.327 14 C 0.153 3.847 15 C -0.240 4.240 16 C 0.129 3.871 17 F -0.116 7.116 18 C -0.210 4.210 19 C 0.041 3.959 20 C -0.051 4.051 21 N -0.097 5.097 22 C -0.191 4.191 23 H 0.081 0.919 24 H 0.073 0.927 25 H 0.069 0.931 26 H 0.046 0.954 27 H 0.040 0.960 28 H 0.074 0.926 29 H 0.243 0.757 30 H 0.160 0.840 31 H 0.153 0.847 32 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -9.270 2.584 9.654 13.631 hybrid contribution -0.345 -0.402 -1.282 1.387 sum -9.615 2.182 8.372 12.934 Atomic orbital electron populations 1.22339 0.97105 1.01891 1.01415 1.21097 0.91408 0.97456 0.85332 0.90488 1.19883 0.97975 0.95846 0.92200 1.21044 0.89332 1.35828 1.09869 0.90626 1.25028 0.94705 0.95778 0.97781 1.69908 1.06617 1.44973 1.32084 0.86834 0.80138 0.80039 0.82536 1.20248 1.21385 1.19113 1.45023 1.68846 1.12765 1.06097 1.17336 0.90422 0.90352 0.86541 1.20786 1.10998 0.94020 0.98161 1.16995 0.98328 0.77910 0.93828 1.91502 1.90255 1.32773 1.97074 1.20579 1.08041 0.93683 0.98715 1.15241 1.01020 0.91917 0.87741 1.25620 0.93439 0.93202 0.92800 1.81224 1.09004 1.08647 1.10848 1.20575 1.07215 1.00779 0.90541 0.91929 0.92697 0.93074 0.95379 0.96028 0.92615 0.75708 0.84022 0.84706 0.84696 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.23 9.43 37.16 0.35 -1.88 16 2 C 0.15 2.46 2.21 -67.93 -0.15 2.31 16 3 H 0.08 1.30 6.46 -51.92 -0.34 0.96 16 4 C -0.02 -0.44 3.58 -27.88 -0.10 -0.54 16 5 C -0.52 -13.32 9.39 -34.44 -0.32 -13.65 16 6 H 0.08 2.12 7.99 -52.49 -0.42 1.70 16 7 C 0.07 1.87 5.47 -17.82 -0.10 1.77 16 8 N -0.90 -26.26 13.96 55.43 0.77 -25.49 16 9 Si 0.88 20.14 27.46 -169.99 -4.67 15.47 16 10 H -0.28 -6.30 7.11 56.52 0.40 -5.89 16 11 H -0.29 -6.69 7.11 56.52 0.40 -6.29 16 12 H -0.27 -5.79 6.55 56.52 0.37 -5.42 16 13 N -0.70 -10.64 4.96 -52.21 -0.26 -10.90 16 14 C 0.26 3.64 6.63 -83.85 -0.56 3.09 16 15 C -0.21 -2.88 8.83 -39.24 -0.35 -3.23 16 16 C 0.15 1.89 7.29 -39.51 -0.29 1.61 16 17 F -0.14 -1.78 17.26 2.25 0.04 -1.74 16 18 C -0.19 -2.17 9.73 -39.06 -0.38 -2.55 16 19 C 0.05 0.55 5.73 -106.97 -0.61 -0.07 16 20 C 0.26 3.45 15.33 -22.48 -0.34 3.11 16 21 N -0.42 -6.26 18.54 41.83 0.78 -5.49 16 22 C -0.17 -2.07 9.60 -38.95 -0.37 -2.45 16 23 H 0.06 0.78 8.14 -51.93 -0.42 0.35 16 24 H 0.05 0.71 8.14 -51.93 -0.42 0.29 16 25 H 0.05 0.61 7.73 -51.93 -0.40 0.21 16 26 H 0.03 0.57 7.56 -51.93 -0.39 0.18 16 27 H 0.02 0.44 7.21 -51.93 -0.37 0.06 16 28 H 0.26 7.28 8.31 -40.82 -0.34 6.95 16 29 H 0.41 6.05 8.61 -40.82 -0.35 5.70 16 30 H 0.14 1.86 6.11 -52.49 -0.32 1.54 16 31 H 0.14 1.33 8.06 -52.49 -0.42 0.91 16 32 H 0.14 1.53 8.06 -52.48 -0.42 1.11 16 LS Contribution 288.55 15.07 4.35 4.35 Total: -1.00 -28.24 288.55 -5.67 -33.90 By element: Atomic # 1 Polarization: 5.81 SS G_CDS: -3.45 Total: 2.36 kcal Atomic # 6 Polarization: -9.25 SS G_CDS: -3.22 Total: -12.47 kcal Atomic # 7 Polarization: -43.16 SS G_CDS: 1.29 Total: -41.87 kcal Atomic # 9 Polarization: -1.78 SS G_CDS: 0.04 Total: -1.74 kcal Atomic # 14 Polarization: 20.14 SS G_CDS: -4.67 Total: 15.47 kcal Total LS contribution 4.35 Total: 4.35 kcal Total: -28.24 -5.67 -33.90 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000718638622.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.702 kcal (2) G-P(sol) polarization free energy of solvation -28.237 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.465 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.666 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.903 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.798 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds