Wall clock time and date at job start Mon Mar 30 2020 06:31:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.43203 * 179.97438 * 2 1 4 4 C 1.39861 * 120.07831 * 24.80289 * 3 2 1 5 5 C 1.37596 * 119.94373 * 179.67236 * 4 3 2 6 6 C 1.39319 * 120.09712 * 0.61801 * 5 4 3 7 7 N 1.39133 * 119.91989 * 179.69780 * 6 5 4 8 8 C 1.34780 * 119.99854 * 324.80821 * 7 6 5 9 9 O 1.21737 * 119.99982 * 4.56700 * 8 7 6 10 10 C 1.46141 * 119.99868 * 184.56731 * 8 7 6 11 11 H 1.07999 * 120.00221 * 0.02562 * 10 8 7 12 12 C 1.40137 * 120.00172 * 179.97438 * 10 8 7 13 13 N 1.30628 * 119.99718 * 0.02562 * 12 10 8 14 14 Si 1.86802 * 120.00121 * 180.02562 * 12 10 8 15 15 H 1.48489 * 109.46985 * 90.00017 * 14 12 10 16 16 H 1.48499 * 109.47024 * 210.00563 * 14 12 10 17 17 H 1.48506 * 109.46831 * 329.99973 * 14 12 10 18 18 C 1.39175 * 120.15890 * 359.67821 * 6 5 4 19 19 C 1.37818 * 120.05516 * 359.97438 * 18 6 5 20 20 Cl 1.73601 * 120.05329 * 180.02562 * 19 18 6 21 21 H 1.07998 * 120.03064 * 359.96956 * 4 3 2 22 22 H 1.07996 * 119.94920 * 180.29303 * 5 4 3 23 23 H 0.96995 * 120.00081 * 144.80967 * 7 6 5 24 24 H 0.96995 * 120.00324 * 180.02562 * 13 12 10 25 25 H 1.08001 * 119.97836 * 180.02562 * 18 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2695 -1.0977 -0.5077 5 6 4.6454 -1.0913 -0.5125 6 6 5.3408 0.0021 -0.0007 7 7 6.7321 0.0020 -0.0017 8 6 7.4060 -1.1473 0.2023 9 8 6.8002 -2.1983 0.3044 10 6 8.8640 -1.1318 0.3008 11 1 9.4015 -0.1994 0.2107 12 6 9.5647 -2.3266 0.5134 13 7 8.9147 -3.4543 0.6230 14 14 11.4283 -2.3066 0.6401 15 1 11.8260 -2.1115 2.0574 16 1 11.9719 -3.5974 0.1466 17 1 11.9685 -1.1950 -0.1832 18 6 4.6470 1.0946 0.5112 19 6 3.2688 1.0981 0.5127 20 17 2.4035 2.4611 1.1506 21 1 2.7317 -1.9481 -0.9000 22 1 5.1871 -1.9373 -0.9089 23 1 7.2171 0.8289 -0.1491 24 1 9.3995 -4.2813 0.7705 25 1 5.1890 1.9408 0.9069 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000037393494.mol2 25 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:31:30 Heat of formation + Delta-G solvation = 5.436601 kcal Electronic energy + Delta-G solvation = -14727.398818 eV Core-core repulsion = 11924.708528 eV Total energy + Delta-G solvation = -2802.690290 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 250.025 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -39.70303 -37.70123 -36.38910 -36.02847 -33.70947 -32.68234 -30.63581 -29.71428 -26.62349 -23.33998 -22.69168 -20.27861 -18.79802 -17.87899 -16.72806 -15.82060 -15.26468 -14.59137 -14.29955 -14.00996 -13.88122 -13.53983 -13.06791 -12.75725 -12.55087 -12.49301 -11.96341 -11.49513 -11.45146 -11.24230 -11.12748 -10.91006 -10.81673 -10.46680 -9.56693 -9.08220 -8.70781 -7.98308 -7.50878 -6.52713 -5.01140 0.95987 1.44793 2.07616 2.84482 2.97158 3.05645 3.08547 3.15722 3.83350 3.97177 4.07823 4.28172 4.34559 4.93371 5.38250 5.44746 5.56583 5.67441 5.89610 6.09576 6.47247 6.64199 6.88830 7.12794 7.44529 7.65548 7.70963 7.92509 8.67148 8.92125 10.13572 10.36624 Molecular weight = 250.02amu Principal moments of inertia in cm(-1) A = 0.046593 B = 0.004911 C = 0.004523 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 600.806320 B = 5699.780166 C = 6189.638520 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.434 5.434 2 C 0.269 3.731 3 C -0.082 4.082 4 C -0.036 4.036 5 C -0.131 4.131 6 C 0.238 3.762 7 N -0.691 5.691 8 C 0.538 3.462 9 O -0.555 6.555 10 C -0.533 4.533 11 H 0.075 0.925 12 C 0.086 3.914 13 N -0.754 5.754 14 Si 0.915 3.085 15 H -0.270 1.270 16 H -0.277 1.277 17 H -0.263 1.263 18 C -0.172 4.172 19 C 0.035 3.965 20 Cl -0.069 7.069 21 H 0.137 0.863 22 H 0.160 0.840 23 H 0.399 0.601 24 H 0.275 0.725 25 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.392 7.475 -1.448 8.335 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.110 5.110 2 C -0.045 4.045 3 C -0.088 4.088 4 C -0.058 4.058 5 C -0.152 4.152 6 C 0.135 3.865 7 N -0.332 5.332 8 C 0.346 3.654 9 O -0.437 6.437 10 C -0.568 4.568 11 H 0.093 0.907 12 C -0.136 4.136 13 N -0.382 5.382 14 Si 0.739 3.261 15 H -0.195 1.195 16 H -0.202 1.202 17 H -0.187 1.187 18 C -0.195 4.195 19 C 0.005 3.995 20 Cl -0.040 7.040 21 H 0.155 0.845 22 H 0.178 0.822 23 H 0.234 0.766 24 H 0.086 0.914 25 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -5.500 6.582 -1.268 8.671 hybrid contribution 1.540 0.594 0.198 1.662 sum -3.960 7.176 -1.070 8.266 Atomic orbital electron populations 1.81163 1.11969 1.08059 1.09827 1.25505 0.92459 0.93387 0.93191 1.15675 0.84316 0.97086 1.11733 1.21013 0.93965 0.95345 0.95472 1.21606 0.92870 1.00381 1.00332 1.18052 0.85695 0.92925 0.89808 1.44307 1.02046 1.14019 1.72869 1.18475 0.88614 0.80867 0.77454 1.90636 1.69227 1.29602 1.54222 1.20847 0.89074 0.94983 1.51925 0.90686 1.25761 1.00567 0.94758 0.92563 1.69952 1.37211 0.98834 1.32160 0.86234 0.81933 0.78624 0.79315 1.19479 1.20184 1.18657 1.20692 0.91335 1.01620 1.05830 1.20486 0.91777 0.88323 0.98919 1.98369 1.76822 1.43641 1.85169 0.84537 0.82229 0.76618 0.91441 0.84274 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -7.26 18.54 41.84 0.78 -6.48 15 2 C 0.27 4.15 14.38 -22.47 -0.32 3.83 15 3 C -0.08 -1.21 5.75 -106.73 -0.61 -1.83 15 4 C -0.04 -0.54 9.75 -39.21 -0.38 -0.92 15 5 C -0.13 -2.29 8.66 -39.41 -0.34 -2.63 15 6 C 0.24 4.13 6.29 -83.80 -0.53 3.60 15 7 N -0.69 -13.10 5.30 -11.20 -0.06 -13.16 15 8 C 0.54 13.18 7.57 -13.09 -0.10 13.08 15 9 O -0.56 -15.40 12.42 5.16 0.06 -15.34 15 10 C -0.53 -13.13 9.53 -35.70 -0.34 -13.47 15 11 H 0.07 1.66 7.85 -52.49 -0.41 1.25 15 12 C 0.09 2.13 5.50 -17.35 -0.10 2.03 15 13 N -0.75 -20.24 11.82 55.55 0.66 -19.58 15 14 Si 0.91 18.04 29.56 -169.99 -5.02 13.01 15 15 H -0.27 -5.26 7.11 56.52 0.40 -4.86 15 16 H -0.28 -5.39 7.11 56.52 0.40 -4.99 15 17 H -0.26 -5.00 7.11 56.52 0.40 -4.60 15 18 C -0.17 -2.51 9.73 -39.39 -0.38 -2.90 15 19 C 0.03 0.50 6.34 -39.10 -0.25 0.26 15 20 Cl -0.07 -0.92 28.02 -51.86 -1.45 -2.37 15 21 H 0.14 1.70 8.06 -52.49 -0.42 1.28 15 22 H 0.16 3.21 6.20 -52.49 -0.33 2.88 15 23 H 0.40 6.27 8.79 -40.82 -0.36 5.91 15 24 H 0.27 6.69 8.29 -40.82 -0.34 6.35 15 25 H 0.14 1.74 8.06 -52.49 -0.42 1.31 15 LS Contribution 257.74 15.07 3.88 3.88 Total: -1.00 -28.87 257.74 -5.59 -34.45 By element: Atomic # 1 Polarization: 5.62 SS G_CDS: -1.08 Total: 4.54 kcal Atomic # 6 Polarization: 4.40 SS G_CDS: -3.35 Total: 1.04 kcal Atomic # 7 Polarization: -40.60 SS G_CDS: 1.37 Total: -39.22 kcal Atomic # 8 Polarization: -15.40 SS G_CDS: 0.06 Total: -15.34 kcal Atomic # 14 Polarization: 18.04 SS G_CDS: -5.02 Total: 13.01 kcal Atomic # 17 Polarization: -0.92 SS G_CDS: -1.45 Total: -2.37 kcal Total LS contribution 3.88 Total: 3.88 kcal Total: -28.87 -5.59 -34.45 kcal The number of atoms in the molecule is 25 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000037393494.mol2 25 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.889 kcal (2) G-P(sol) polarization free energy of solvation -28.867 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.023 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.586 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.453 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.437 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds