Wall clock time and date at job start Mon Mar 30 2020 06:07:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.40506 * 120.14294 * 2 1 4 4 C 1.34920 * 120.31296 * 180.02562 * 3 2 1 5 5 N 1.36565 * 120.60411 * 359.95972 * 4 3 2 6 6 C 1.36804 * 132.57750 * 180.02562 * 5 4 3 7 7 Cl 1.73596 * 126.41997 * 359.96149 * 6 5 4 8 8 C 1.35197 * 107.17143 * 180.02562 * 6 5 4 9 9 C 1.50700 * 125.69510 * 179.97438 * 8 6 5 10 10 C 1.50698 * 109.46809 * 89.99731 * 9 8 6 11 11 H 1.08000 * 120.00489 * 359.97438 * 10 9 8 12 12 C 1.37875 * 119.99969 * 180.02562 * 10 9 8 13 13 N 1.31513 * 120.00442 * 179.97438 * 12 10 9 14 14 Si 1.86802 * 119.99895 * 359.97438 * 12 10 9 15 15 H 1.48499 * 109.47418 * 89.99768 * 14 12 10 16 16 H 1.48499 * 109.47498 * 210.00105 * 14 12 10 17 17 H 1.48504 * 109.47133 * 329.99989 * 14 12 10 18 18 N 1.33591 * 108.61033 * 359.97438 * 8 6 5 19 19 C 1.32504 * 109.16647 * 0.02562 * 18 8 6 20 20 C 1.36003 * 120.14292 * 179.97438 * 2 1 3 21 21 H 1.09001 * 109.46981 * 270.04903 * 1 2 3 22 22 H 1.08997 * 109.46860 * 30.04754 * 1 2 3 23 23 H 1.08997 * 109.46730 * 150.04970 * 1 2 3 24 24 H 1.08001 * 119.84545 * 359.96658 * 3 2 1 25 25 H 1.07997 * 119.70089 * 180.23471 * 4 3 2 26 26 H 1.08996 * 109.46839 * 209.99595 * 9 8 6 27 27 H 1.08993 * 109.46805 * 329.99691 * 9 8 6 28 28 H 0.97001 * 120.00307 * 179.97438 * 13 12 10 29 29 H 1.08002 * 120.33779 * 0.02898 * 20 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2126 1.2151 0.0000 4 6 3.5618 1.2191 -0.0005 5 7 4.2605 0.0457 -0.0002 6 6 5.5996 -0.2341 -0.0002 7 17 6.8942 0.9224 -0.0014 8 6 5.7261 -1.5802 -0.0004 9 6 7.0269 -2.3411 -0.0010 10 6 7.4610 -2.5948 1.4197 11 1 6.8557 -2.2402 2.2408 12 6 8.6313 -3.2789 1.6711 13 7 9.0105 -3.4999 2.9109 14 14 9.6786 -3.8917 0.2509 15 1 10.6627 -2.8454 -0.1261 16 1 10.3989 -5.1234 0.6623 17 1 8.8068 -4.1935 -0.9128 18 7 4.5055 -2.1231 0.0000 19 6 3.5994 -1.1563 -0.0001 20 6 2.1900 -1.1761 0.0005 21 1 -0.3633 0.0009 1.0277 22 1 -0.3633 0.8895 -0.5146 23 1 -0.3633 -0.8904 -0.5131 24 1 1.6724 2.1503 -0.0005 25 1 4.0941 2.1587 0.0033 26 1 6.8909 -3.2927 -0.5148 27 1 7.7896 -1.7563 -0.5150 28 1 9.8337 -3.9815 3.0878 29 1 1.6578 -2.1159 0.0005 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260457071.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:07:02 Heat of formation + Delta-G solvation = 74.598183 kcal Electronic energy + Delta-G solvation = -15368.647786 eV Core-core repulsion = 12704.789661 eV Total energy + Delta-G solvation = -2663.858125 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 250.057 amu Computer time = 0.21 seconds Orbital eigenvalues (eV) -42.47248 -37.73820 -36.24420 -34.19667 -32.99446 -31.05907 -29.75932 -28.79883 -26.09057 -23.57651 -22.46013 -21.60663 -19.73096 -17.77821 -16.80599 -16.52510 -15.69297 -15.25806 -14.68641 -14.31383 -14.13951 -13.62087 -13.00981 -12.68305 -12.29416 -12.10755 -11.79933 -11.69691 -11.59378 -11.39173 -11.01042 -10.56849 -10.47398 -10.28593 -9.97838 -9.55233 -9.33145 -8.51471 -8.21363 -7.39527 -6.00562 -3.98926 0.87394 1.38284 1.97419 3.14194 3.16088 3.34849 3.42091 3.46109 3.76063 4.36036 4.47864 4.50520 4.81711 4.94483 5.15246 5.27299 5.36272 5.42318 5.55714 5.76672 5.81235 5.94692 6.13080 6.29584 6.56824 6.88253 6.98741 7.16456 7.35377 7.70903 8.30948 8.54533 9.03008 9.58365 11.12603 Molecular weight = 250.06amu Principal moments of inertia in cm(-1) A = 0.032913 B = 0.006325 C = 0.005707 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 850.524176 B = 4425.580583 C = 4905.401572 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.107 4.107 2 C -0.078 4.078 3 C -0.150 4.150 4 C 0.066 3.934 5 N -0.365 5.365 6 C -0.043 4.043 7 Cl -0.003 7.003 8 C 0.153 3.847 9 C 0.052 3.948 10 C -0.504 4.504 11 H 0.072 0.928 12 C 0.072 3.928 13 N -0.900 5.900 14 Si 0.874 3.126 15 H -0.275 1.275 16 H -0.286 1.286 17 H -0.263 1.263 18 N -0.478 5.478 19 C 0.232 3.768 20 C -0.080 4.080 21 H 0.073 0.927 22 H 0.068 0.932 23 H 0.070 0.930 24 H 0.147 0.853 25 H 0.158 0.842 26 H 0.042 0.958 27 H 0.036 0.964 28 H 0.264 0.736 29 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.218 10.919 -7.747 19.529 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C -0.084 4.084 3 C -0.171 4.171 4 C -0.057 4.057 5 N -0.041 5.041 6 C -0.179 4.179 7 Cl 0.025 6.975 8 C 0.019 3.981 9 C 0.014 3.986 10 C -0.542 4.542 11 H 0.090 0.910 12 C -0.129 4.129 13 N -0.538 5.538 14 Si 0.701 3.299 15 H -0.201 1.201 16 H -0.212 1.212 17 H -0.187 1.187 18 N -0.199 5.199 19 C -0.010 4.010 20 C -0.100 4.100 21 H 0.092 0.908 22 H 0.087 0.913 23 H 0.089 0.911 24 H 0.165 0.835 25 H 0.176 0.824 26 H 0.060 0.940 27 H 0.054 0.946 28 H 0.074 0.926 29 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -14.030 10.120 -7.639 18.910 hybrid contribution 0.992 0.845 -0.465 1.384 sum -13.038 10.964 -8.103 18.864 Atomic orbital electron populations 1.20718 0.89910 1.03049 1.02664 1.19667 0.96744 0.92045 0.99894 1.20566 0.91828 0.99059 1.05687 1.21573 0.93039 0.89030 1.02058 1.42610 1.06161 1.07889 1.47433 1.21292 0.79018 0.92211 1.25398 1.98337 1.43140 1.58340 1.97716 1.21303 0.95060 0.87612 0.94102 1.18341 0.85874 0.94847 0.99521 1.20740 1.07306 1.36297 0.89872 0.90966 1.24898 0.97155 0.95367 0.95521 1.69889 1.23687 1.41587 1.18683 0.86857 0.80901 0.78757 0.83413 1.20053 1.21159 1.18698 1.70919 0.98189 1.28082 1.22675 1.20888 0.94256 0.79867 1.05997 1.20059 0.88009 0.99469 1.02481 0.90791 0.91287 0.91121 0.83543 0.82413 0.93981 0.94591 0.92618 0.83223 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.78 10.02 36.01 0.36 -0.42 15 2 C -0.08 -0.86 5.88 -104.57 -0.62 -1.48 15 3 C -0.15 -1.59 9.67 -39.91 -0.39 -1.98 15 4 C 0.07 0.87 10.93 -16.62 -0.18 0.69 15 5 N -0.36 -6.57 2.95 -59.46 -0.18 -6.75 15 6 C -0.04 -0.90 7.59 -16.42 -0.12 -1.02 15 7 Cl 0.00 -0.06 28.84 -51.86 -1.50 -1.56 15 8 C 0.15 3.61 6.25 -82.91 -0.52 3.09 15 9 C 0.05 1.34 4.41 -29.04 -0.13 1.21 15 10 C -0.50 -14.83 9.65 -34.44 -0.33 -15.16 15 11 H 0.07 2.35 7.98 -52.49 -0.42 1.93 15 12 C 0.07 2.13 5.47 -17.82 -0.10 2.03 15 13 N -0.90 -28.05 13.96 55.43 0.77 -27.28 15 14 Si 0.87 21.74 27.47 -169.99 -4.67 17.07 15 15 H -0.27 -6.64 7.11 56.52 0.40 -6.24 15 16 H -0.29 -7.03 7.11 56.52 0.40 -6.63 15 17 H -0.26 -6.27 6.54 56.52 0.37 -5.90 15 18 N -0.48 -10.94 11.32 -8.95 -0.10 -11.04 15 19 C 0.23 4.40 7.81 -155.98 -1.22 3.19 15 20 C -0.08 -1.14 9.75 -39.36 -0.38 -1.52 15 21 H 0.07 0.49 8.14 -51.93 -0.42 0.07 15 22 H 0.07 0.39 8.10 -51.93 -0.42 -0.03 15 23 H 0.07 0.46 8.08 -51.93 -0.42 0.04 15 24 H 0.15 1.01 8.06 -52.49 -0.42 0.59 15 25 H 0.16 1.69 8.06 -52.49 -0.42 1.26 15 26 H 0.04 1.08 7.20 -51.93 -0.37 0.71 15 27 H 0.04 0.87 7.31 -51.93 -0.38 0.50 15 28 H 0.26 7.67 8.31 -40.82 -0.34 7.33 15 29 H 0.15 1.84 8.06 -52.49 -0.42 1.42 15 LS Contribution 272.01 15.07 4.10 4.10 Total: -1.00 -33.72 272.01 -8.06 -41.79 By element: Atomic # 1 Polarization: -2.09 SS G_CDS: -2.87 Total: -4.96 kcal Atomic # 6 Polarization: -7.74 SS G_CDS: -3.62 Total: -11.37 kcal Atomic # 7 Polarization: -45.57 SS G_CDS: 0.50 Total: -45.07 kcal Atomic # 14 Polarization: 21.74 SS G_CDS: -4.67 Total: 17.07 kcal Atomic # 17 Polarization: -0.06 SS G_CDS: -1.50 Total: -1.56 kcal Total LS contribution 4.10 Total: 4.10 kcal Total: -33.72 -8.06 -41.79 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260457071.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 116.383 kcal (2) G-P(sol) polarization free energy of solvation -33.721 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 82.662 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.064 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.785 kcal (6) G-S(sol) free energy of system = (1) + (5) 74.598 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.21 seconds