Wall clock time and date at job start Mon Mar 30 2020 06:07:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.35115 * 126.41069 * 2 1 4 4 C 1.50706 * 125.68871 * 0.25061 * 3 2 1 5 5 C 1.50700 * 109.46452 * 269.71068 * 4 3 2 6 6 H 1.08001 * 120.00764 * 0.02562 * 5 4 3 7 7 C 1.37881 * 119.99896 * 180.02562 * 5 4 3 8 8 N 1.31513 * 120.00479 * 180.02562 * 7 5 4 9 9 Si 1.86805 * 119.99958 * 359.97438 * 7 5 4 10 10 H 1.48502 * 109.47226 * 89.99834 * 9 7 5 11 11 H 1.48493 * 109.47331 * 210.00067 * 9 7 5 12 12 H 1.48504 * 109.46912 * 330.00347 * 9 7 5 13 13 N 1.33504 * 108.62045 * 179.97438 * 3 2 1 14 14 C 1.32558 * 109.15652 * 0.02562 * 13 3 2 15 15 C 1.41034 * 132.32592 * 180.02562 * 14 13 3 16 16 Cl 1.73598 * 120.34823 * 359.94886 * 15 14 13 17 17 C 1.36121 * 119.30285 * 179.97438 * 15 14 13 18 18 C 1.40461 * 119.68737 * 0.02562 * 17 15 14 19 19 C 1.34948 * 120.31081 * 359.97438 * 18 17 15 20 20 N 1.36521 * 120.63133 * 359.97438 * 19 18 17 21 21 H 1.08998 * 109.47517 * 90.02037 * 1 2 3 22 22 H 1.09007 * 109.47456 * 210.02272 * 1 2 3 23 23 H 1.08999 * 109.47532 * 330.02327 * 1 2 3 24 24 H 1.08994 * 109.47059 * 29.70901 * 4 3 2 25 25 H 1.08994 * 109.46996 * 149.71691 * 4 3 2 26 26 H 0.97001 * 120.00415 * 179.97438 * 8 7 5 27 27 H 1.08000 * 120.15172 * 180.02562 * 17 15 14 28 28 H 1.08000 * 119.84514 * 180.02562 * 18 17 15 29 29 H 1.07998 * 119.68610 * 180.02562 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.3089 1.0874 0.0000 4 6 1.8457 2.5215 0.0054 5 6 1.6932 3.0052 -1.4137 6 1 1.9096 2.3407 -2.2371 7 6 1.2774 4.2964 -1.6610 8 7 1.1438 4.7185 -2.8993 9 14 0.9024 5.4458 -0.2369 10 1 2.1355 6.1802 0.1444 11 1 -0.1448 6.4157 -0.6462 12 1 0.4186 4.6550 0.9232 13 7 3.5802 0.6795 0.0006 14 6 3.6118 -0.6457 0.0004 15 6 4.6768 -1.5702 0.0012 16 17 6.3212 -1.0139 0.0015 17 6 4.4018 -2.9034 0.0013 18 6 3.0661 -3.3381 -0.0001 19 6 2.0579 -2.4411 -0.0009 20 7 2.3191 -1.1011 0.0001 21 1 -0.3634 -0.0004 -1.0276 22 1 -0.3634 -0.8898 0.5142 23 1 -0.3634 0.8902 0.5135 24 1 0.8865 2.5915 0.5182 25 1 2.5803 3.1386 0.5226 26 1 0.8509 5.6267 -3.0733 27 1 5.2068 -3.6233 0.0023 28 1 2.8450 -4.3953 0.0004 29 1 1.0347 -2.7866 -0.0015 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260533367.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:07:16 Heat of formation + Delta-G solvation = 74.793144 kcal Electronic energy + Delta-G solvation = -15511.318315 eV Core-core repulsion = 12847.468645 eV Total energy + Delta-G solvation = -2663.849670 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 250.057 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -42.48970 -37.54562 -36.42358 -33.43855 -33.21381 -31.46007 -29.86827 -28.54482 -26.17187 -23.65652 -22.48464 -21.65207 -19.60848 -17.16345 -16.83776 -16.78637 -15.72714 -15.68586 -15.05381 -14.17938 -13.36485 -13.05303 -12.92483 -12.89366 -12.21496 -12.17404 -12.02517 -11.84722 -11.62635 -11.48723 -10.88449 -10.62430 -10.45661 -10.19086 -9.97443 -9.48379 -9.33223 -8.54418 -8.10948 -7.37346 -6.03565 -4.02142 0.73199 1.43886 2.00706 2.95610 3.24079 3.32869 3.39825 3.41242 3.77246 4.35469 4.44560 4.56493 4.77640 4.96833 5.26248 5.30479 5.44970 5.69930 5.81189 5.84790 5.94411 5.96113 6.23506 6.32111 6.66740 6.93535 7.06519 7.24945 7.43704 7.70157 8.42493 8.53088 9.00843 9.55589 11.09617 Molecular weight = 250.06amu Principal moments of inertia in cm(-1) A = 0.027804 B = 0.006541 C = 0.005695 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1006.821785 B = 4279.406889 C = 4915.659405 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 C -0.070 4.070 3 C 0.122 3.878 4 C 0.055 3.945 5 C -0.506 4.506 6 H 0.071 0.929 7 C 0.071 3.929 8 N -0.900 5.900 9 Si 0.877 3.123 10 H -0.275 1.275 11 H -0.287 1.287 12 H -0.264 1.264 13 N -0.464 5.464 14 C 0.203 3.797 15 C 0.008 3.992 16 Cl -0.036 7.036 17 C -0.107 4.107 18 C -0.153 4.153 19 C 0.068 3.932 20 N -0.360 5.360 21 H 0.075 0.925 22 H 0.053 0.947 23 H 0.088 0.912 24 H 0.037 0.963 25 H 0.034 0.966 26 H 0.264 0.736 27 H 0.145 0.855 28 H 0.153 0.847 29 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.636 -16.939 7.738 18.694 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.120 4.120 2 C -0.181 4.181 3 C -0.010 4.010 4 C 0.017 3.983 5 C -0.545 4.545 6 H 0.090 0.910 7 C -0.131 4.131 8 N -0.539 5.539 9 Si 0.704 3.296 10 H -0.200 1.200 11 H -0.213 1.213 12 H -0.189 1.189 13 N -0.184 5.184 14 C -0.040 4.040 15 C -0.021 4.021 16 Cl -0.007 7.007 17 C -0.131 4.131 18 C -0.175 4.175 19 C -0.055 4.055 20 N -0.034 5.034 21 H 0.093 0.907 22 H 0.072 0.928 23 H 0.106 0.894 24 H 0.055 0.945 25 H 0.052 0.948 26 H 0.074 0.926 27 H 0.163 0.837 28 H 0.170 0.830 29 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges 2.346 -16.157 7.630 18.022 hybrid contribution -0.646 0.093 0.466 0.802 sum 1.701 -16.064 8.097 18.069 Atomic orbital electron populations 1.20114 0.86350 1.02519 1.03011 1.21112 0.94658 0.84185 1.18098 1.21319 0.86854 0.96921 0.95928 1.18274 0.96022 0.84884 0.99125 1.20805 1.45402 0.98102 0.90163 0.91035 1.24936 0.94929 0.97674 0.95534 1.69893 1.47422 1.17726 1.18840 0.86823 0.78541 0.81092 0.83163 1.20033 1.21267 1.18880 1.70787 1.22249 1.04791 1.20566 1.20271 0.83221 0.91234 1.09254 1.19524 0.85116 0.91409 1.06082 1.98375 1.15379 1.90400 1.96537 1.20831 0.97578 0.93112 1.01601 1.20535 0.90980 0.99864 1.06147 1.21622 1.01328 0.81021 1.01514 1.42650 1.08419 1.05393 1.46967 0.90668 0.92846 0.89379 0.94541 0.94774 0.92604 0.83705 0.82969 0.82123 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.95 10.09 36.00 0.36 -0.59 15 2 C -0.07 -1.35 7.03 -81.48 -0.57 -1.92 15 3 C 0.12 2.82 6.25 -82.97 -0.52 2.30 15 4 C 0.06 1.37 4.37 -29.03 -0.13 1.25 15 5 C -0.51 -14.67 9.65 -34.44 -0.33 -15.01 15 6 H 0.07 2.31 7.98 -52.49 -0.42 1.89 15 7 C 0.07 2.06 5.47 -17.82 -0.10 1.96 15 8 N -0.90 -27.79 13.96 55.43 0.77 -27.01 15 9 Si 0.88 21.41 27.47 -169.99 -4.67 16.74 15 10 H -0.27 -6.70 7.11 56.52 0.40 -6.30 15 11 H -0.29 -6.90 7.11 56.52 0.40 -6.50 15 12 H -0.26 -6.05 6.54 56.52 0.37 -5.68 15 13 N -0.46 -10.84 11.32 -8.98 -0.10 -10.95 15 14 C 0.20 3.98 7.63 -156.02 -1.19 2.79 15 15 C 0.01 0.13 6.34 -39.28 -0.25 -0.12 15 16 Cl -0.04 -0.55 28.99 -51.86 -1.50 -2.05 15 17 C -0.11 -1.26 9.85 -39.51 -0.39 -1.65 15 18 C -0.15 -1.56 9.98 -39.91 -0.40 -1.96 15 19 C 0.07 0.84 10.85 -16.63 -0.18 0.66 15 20 N -0.36 -6.27 2.95 -58.43 -0.17 -6.44 15 21 H 0.07 1.16 8.14 -51.93 -0.42 0.74 15 22 H 0.05 0.62 8.14 -51.92 -0.42 0.20 15 23 H 0.09 1.36 7.13 -51.93 -0.37 0.99 15 24 H 0.04 0.85 6.18 -51.93 -0.32 0.53 15 25 H 0.03 0.86 7.57 -51.93 -0.39 0.47 15 26 H 0.26 7.60 8.31 -40.82 -0.34 7.26 15 27 H 0.15 1.25 8.06 -52.49 -0.42 0.83 15 28 H 0.15 0.92 8.06 -52.49 -0.42 0.49 15 29 H 0.16 1.40 8.06 -52.49 -0.42 0.98 15 LS Contribution 270.57 15.07 4.08 4.08 Total: -1.00 -33.96 270.57 -8.07 -42.03 By element: Atomic # 1 Polarization: -1.33 SS G_CDS: -2.78 Total: -4.11 kcal Atomic # 6 Polarization: -8.60 SS G_CDS: -3.69 Total: -12.29 kcal Atomic # 7 Polarization: -44.90 SS G_CDS: 0.50 Total: -44.40 kcal Atomic # 14 Polarization: 21.41 SS G_CDS: -4.67 Total: 16.74 kcal Atomic # 17 Polarization: -0.55 SS G_CDS: -1.50 Total: -2.05 kcal Total LS contribution 4.08 Total: 4.08 kcal Total: -33.96 -8.07 -42.03 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260533367.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 116.820 kcal (2) G-P(sol) polarization free energy of solvation -33.956 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 82.864 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.071 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.027 kcal (6) G-S(sol) free energy of system = (1) + (5) 74.793 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds