Wall clock time and date at job start Mon Mar 30 2020 06:43:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.38241 * 120.00931 * 2 1 4 4 C 1.38212 * 120.01387 * 180.25158 * 3 2 1 5 5 C 1.50701 * 119.98823 * 179.72703 * 4 3 2 6 6 N 1.46901 * 109.46921 * 269.72665 * 5 4 3 7 7 C 1.46906 * 110.99793 * 179.97438 * 6 5 4 8 8 H 1.09003 * 109.47279 * 325.00167 * 7 6 5 9 9 C 1.52995 * 109.46946 * 85.00144 * 7 6 5 10 10 C 1.50701 * 109.46893 * 205.00308 * 7 6 5 11 11 H 1.07996 * 120.00253 * 0.02562 * 10 7 6 12 12 C 1.37878 * 119.99674 * 180.02562 * 10 7 6 13 13 N 1.31513 * 120.00353 * 359.97438 * 12 10 7 14 14 Si 1.86796 * 119.99967 * 179.97438 * 12 10 7 15 15 H 1.48506 * 109.47200 * 359.97438 * 14 12 10 16 16 H 1.48506 * 109.47268 * 119.99842 * 14 12 10 17 17 H 1.48506 * 109.47301 * 239.99804 * 14 12 10 18 18 C 1.38271 * 120.02863 * 359.45432 * 4 3 2 19 19 C 1.38189 * 120.01045 * 0.25103 * 18 4 3 20 20 C 1.38329 * 120.00676 * 179.68243 * 2 1 3 21 21 Cl 1.73603 * 120.01103 * 0.04704 * 20 2 1 22 22 H 1.09001 * 109.47214 * 270.32094 * 1 2 3 23 23 H 1.09001 * 109.46874 * 30.31380 * 1 2 3 24 24 H 1.08990 * 109.47170 * 150.31411 * 1 2 3 25 25 H 1.08000 * 119.99155 * 0.02562 * 3 2 1 26 26 H 1.09002 * 109.47060 * 29.72846 * 5 4 3 27 27 H 1.09001 * 109.47380 * 149.72933 * 5 4 3 28 28 H 1.00899 * 111.00283 * 303.95218 * 6 5 4 29 29 H 1.09001 * 109.47056 * 179.97438 * 9 7 6 30 30 H 1.09000 * 109.47395 * 299.99746 * 9 7 6 31 31 H 1.09003 * 109.47112 * 59.99921 * 9 7 6 32 32 H 0.97002 * 120.00598 * 179.97438 * 13 12 10 33 33 H 1.07999 * 119.99735 * 180.27335 * 18 4 3 34 34 H 1.07995 * 120.01195 * 180.02562 * 19 18 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1984 1.1971 0.0000 4 6 3.5805 1.1972 -0.0053 5 6 4.3336 2.5025 -0.0115 6 7 4.5788 2.9198 -1.3985 7 6 5.3121 4.1919 -1.4437 8 1 4.9937 4.8246 -0.6152 9 6 6.8133 3.9194 -1.3296 10 6 5.0260 4.8905 -2.7480 11 1 4.3652 4.4353 -3.4708 12 6 5.6079 6.1108 -3.0185 13 7 6.4123 6.6654 -2.1382 14 14 5.2539 6.9765 -4.6355 15 1 4.3250 6.1493 -5.4468 16 1 4.6324 8.2976 -4.3640 17 1 6.5233 7.1705 -5.3814 18 6 4.2726 0.0002 0.0009 19 6 3.5826 -1.1971 0.0070 20 6 2.1988 -1.1979 0.0066 21 17 1.3312 -2.7016 0.0137 22 1 -0.3634 0.0058 1.0276 23 1 -0.3633 0.8872 -0.5187 24 1 -0.3633 -0.8927 -0.5089 25 1 1.6584 2.1324 0.0004 26 1 3.7441 3.2645 0.4984 27 1 5.2859 2.3751 0.5033 28 1 5.0681 2.2015 -1.9111 29 1 7.3575 4.8632 -1.3637 30 1 7.0202 3.4141 -0.3863 31 1 7.1317 3.2867 -2.1582 32 1 6.8220 7.5238 -2.3286 33 1 5.3526 0.0009 0.0012 34 1 4.1231 -2.1320 0.0123 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000134970468.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:43:34 Heat of formation + Delta-G solvation = 3.613247 kcal Electronic energy + Delta-G solvation = -15868.558896 eV Core-core repulsion = 13212.425587 eV Total energy + Delta-G solvation = -2656.133308 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 253.093 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -39.51295 -36.68764 -35.87434 -33.26306 -32.39633 -30.97892 -28.12647 -26.90819 -25.21113 -24.33313 -22.19949 -20.44069 -20.17015 -16.86401 -16.33444 -15.84260 -15.00173 -14.70378 -14.29472 -14.00840 -13.60531 -13.24542 -13.01805 -12.78100 -12.44698 -12.33524 -11.81997 -11.64497 -11.47856 -11.30766 -11.04283 -10.90194 -10.77699 -10.64918 -10.45380 -10.16668 -9.90207 -9.03122 -8.75737 -8.43986 -8.37999 -7.27902 -5.99990 -4.03263 1.22963 1.36884 2.14580 3.31131 3.38981 3.44552 3.68192 4.43987 4.75953 4.80440 4.96326 5.31721 5.33670 5.35091 5.53587 5.56333 5.57662 5.67482 5.83597 5.98350 6.13792 6.21418 6.28273 6.41973 6.65299 6.74719 6.82141 6.91996 7.05875 7.31716 7.71390 7.86518 8.23876 8.48847 8.57659 9.04400 9.62301 11.07055 Molecular weight = 253.09amu Principal moments of inertia in cm(-1) A = 0.037199 B = 0.004114 C = 0.003913 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 752.530426 B = 6804.703287 C = 7154.519113 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.079 4.079 3 C -0.089 4.089 4 C -0.055 4.055 5 C 0.093 3.907 6 N -0.677 5.677 7 C 0.210 3.790 8 H 0.035 0.965 9 C -0.170 4.170 10 C -0.494 4.494 11 H 0.063 0.937 12 C 0.055 3.945 13 N -0.898 5.898 14 Si 0.897 3.103 15 H -0.273 1.273 16 H -0.285 1.285 17 H -0.286 1.286 18 C -0.112 4.112 19 C -0.108 4.108 20 C -0.045 4.045 21 Cl -0.082 7.082 22 H 0.072 0.928 23 H 0.071 0.929 24 H 0.070 0.930 25 H 0.133 0.867 26 H 0.075 0.925 27 H 0.031 0.969 28 H 0.327 0.673 29 H 0.090 0.910 30 H 0.005 0.995 31 H 0.028 0.972 32 H 0.259 0.741 33 H 0.128 0.872 34 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.472 -14.514 6.114 17.432 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.079 4.079 3 C -0.107 4.107 4 C -0.056 4.056 5 C -0.036 4.036 6 N -0.307 5.307 7 C 0.103 3.897 8 H 0.052 0.948 9 C -0.229 4.229 10 C -0.533 4.533 11 H 0.081 0.919 12 C -0.145 4.145 13 N -0.538 5.538 14 Si 0.725 3.275 15 H -0.197 1.197 16 H -0.211 1.211 17 H -0.212 1.212 18 C -0.130 4.130 19 C -0.127 4.127 20 C -0.072 4.072 21 Cl -0.053 7.053 22 H 0.090 0.910 23 H 0.090 0.910 24 H 0.089 0.911 25 H 0.151 0.849 26 H 0.094 0.906 27 H 0.049 0.951 28 H 0.143 0.857 29 H 0.108 0.892 30 H 0.024 0.976 31 H 0.047 0.953 32 H 0.069 0.931 33 H 0.146 0.854 34 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -8.067 -14.161 6.064 17.389 hybrid contribution 0.863 0.084 -0.579 1.043 sum -7.204 -14.077 5.484 16.737 Atomic orbital electron populations 1.20845 0.90572 1.03397 1.02589 1.19752 0.96564 0.91415 1.00198 1.20942 0.93655 0.97023 0.99113 1.20181 0.93925 0.95446 0.96044 1.20932 0.97174 0.92163 0.93358 1.60890 1.54219 1.06645 1.08917 1.19221 0.87579 0.85093 0.97855 0.94760 1.22438 1.02171 1.02392 0.95890 1.21188 1.26803 1.03184 1.02106 0.91858 1.24949 0.95248 0.97301 0.97048 1.69889 1.31464 1.17612 1.34817 0.86453 0.77956 0.79406 0.83655 1.19717 1.21126 1.21208 1.21029 1.00081 0.91297 1.00637 1.20932 0.91841 0.98903 1.01019 1.20728 0.92286 0.86149 1.08030 1.98330 1.77173 1.32717 1.97092 0.90971 0.90956 0.91093 0.84893 0.90644 0.95144 0.85683 0.89183 0.97613 0.95303 0.93113 0.85439 0.85369 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.22 9.61 36.01 0.35 -0.88 16 2 C -0.08 -1.01 5.88 -104.59 -0.62 -1.63 16 3 C -0.09 -1.25 9.36 -39.59 -0.37 -1.62 16 4 C -0.06 -0.83 5.39 -104.62 -0.56 -1.39 16 5 C 0.09 1.60 5.61 -4.97 -0.03 1.58 16 6 N -0.68 -14.03 6.22 -109.21 -0.68 -14.71 16 7 C 0.21 5.17 2.57 -68.86 -0.18 5.00 16 8 H 0.03 0.92 7.80 -51.93 -0.40 0.52 16 9 C -0.17 -4.00 8.94 37.16 0.33 -3.67 16 10 C -0.49 -13.55 8.84 -34.44 -0.30 -13.85 16 11 H 0.06 1.76 7.81 -52.49 -0.41 1.35 16 12 C 0.05 1.51 5.30 -17.82 -0.09 1.42 16 13 N -0.90 -25.46 11.32 55.43 0.63 -24.83 16 14 Si 0.90 21.38 29.54 -169.99 -5.02 16.36 16 15 H -0.27 -6.45 7.11 56.52 0.40 -6.05 16 16 H -0.29 -6.76 7.11 56.52 0.40 -6.36 16 17 H -0.29 -6.76 7.11 56.52 0.40 -6.36 16 18 C -0.11 -1.50 9.70 -39.59 -0.38 -1.88 16 19 C -0.11 -1.35 9.83 -39.55 -0.39 -1.74 16 20 C -0.05 -0.58 6.31 -39.50 -0.25 -0.83 16 21 Cl -0.08 -0.92 27.30 -51.86 -1.42 -2.34 16 22 H 0.07 0.67 8.14 -51.93 -0.42 0.24 16 23 H 0.07 0.71 8.09 -51.93 -0.42 0.29 16 24 H 0.07 0.71 6.90 -51.93 -0.36 0.35 16 25 H 0.13 1.81 8.06 -52.49 -0.42 1.38 16 26 H 0.08 1.32 8.00 -51.93 -0.42 0.90 16 27 H 0.03 0.52 7.38 -51.93 -0.38 0.13 16 28 H 0.33 6.53 8.47 -39.29 -0.33 6.20 16 29 H 0.09 2.37 6.07 -51.93 -0.32 2.05 16 30 H 0.00 0.10 7.45 -51.93 -0.39 -0.28 16 31 H 0.03 0.65 8.13 -51.93 -0.42 0.23 16 32 H 0.26 7.01 8.31 -40.82 -0.34 6.67 16 33 H 0.13 1.54 8.06 -52.49 -0.42 1.12 16 34 H 0.13 1.33 8.06 -52.49 -0.42 0.91 16 LS Contribution 299.77 15.07 4.52 4.52 Total: -1.00 -28.06 299.77 -9.14 -37.20 By element: Atomic # 1 Polarization: 7.97 SS G_CDS: -4.67 Total: 3.30 kcal Atomic # 6 Polarization: -17.00 SS G_CDS: -2.50 Total: -19.50 kcal Atomic # 7 Polarization: -39.49 SS G_CDS: -0.05 Total: -39.54 kcal Atomic # 14 Polarization: 21.38 SS G_CDS: -5.02 Total: 16.36 kcal Atomic # 17 Polarization: -0.92 SS G_CDS: -1.42 Total: -2.34 kcal Total LS contribution 4.52 Total: 4.52 kcal Total: -28.06 -9.14 -37.20 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000134970468.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.818 kcal (2) G-P(sol) polarization free energy of solvation -28.061 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.757 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.143 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.205 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.613 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds