Wall clock time and date at job start Mon Mar 30 2020 06:50:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.38780 * 120.79618 * 2 1 4 4 Cl 1.73596 * 120.43048 * 359.95868 * 3 2 1 5 5 C 1.38306 * 119.13492 * 179.97438 * 3 2 1 6 6 N 1.31878 * 120.74970 * 0.02562 * 5 3 2 7 7 C 1.31854 * 121.73757 * 359.97438 * 6 5 3 8 8 C 1.38231 * 120.78893 * 0.02562 * 7 6 5 9 9 C 1.50703 * 120.40824 * 179.97438 * 8 7 6 10 10 H 1.08997 * 109.47224 * 179.97438 * 9 8 7 11 11 C 1.50704 * 109.46782 * 299.99589 * 9 8 7 12 12 H 1.07999 * 120.00118 * 63.31691 * 11 9 8 13 13 C 1.37877 * 119.99770 * 243.31286 * 11 9 8 14 14 N 1.31512 * 120.00416 * 5.46019 * 13 11 9 15 15 Si 1.86794 * 119.99927 * 185.45381 * 13 11 9 16 16 H 1.48500 * 109.47062 * 90.00376 * 15 13 11 17 17 H 1.48500 * 109.47574 * 210.00634 * 15 13 11 18 18 H 1.48502 * 109.47196 * 330.00584 * 15 13 11 19 19 C 1.53005 * 109.47436 * 59.99509 * 9 8 7 20 20 C 1.53001 * 109.46548 * 60.83702 * 19 9 8 21 21 C 1.52998 * 109.46861 * 180.83598 * 19 9 8 22 22 H 1.09003 * 109.46899 * 270.01898 * 1 2 3 23 23 H 1.08996 * 109.47181 * 30.02322 * 1 2 3 24 24 H 1.08998 * 109.47092 * 150.02295 * 1 2 3 25 25 H 1.08000 * 119.62601 * 179.97438 * 5 3 2 26 26 H 1.07996 * 119.60109 * 180.28406 * 7 6 5 27 27 H 0.97000 * 120.00551 * 179.97438 * 14 13 11 28 28 H 1.08998 * 109.46649 * 300.84032 * 19 9 8 29 29 H 1.08996 * 109.47286 * 299.99826 * 20 19 9 30 30 H 1.08998 * 109.47376 * 60.00775 * 20 19 9 31 31 H 1.09004 * 109.46627 * 179.97438 * 20 19 9 32 32 H 1.08998 * 109.46883 * 65.77196 * 21 19 9 33 33 H 1.09002 * 109.46654 * 185.77004 * 21 19 9 34 34 H 1.08996 * 109.47502 * 305.76467 * 21 19 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2175 1.1921 0.0000 4 17 1.3819 2.7137 -0.0011 5 6 3.6000 1.1520 0.0005 6 7 4.2411 -0.0004 0.0005 7 6 3.5984 -1.1517 0.0005 8 6 2.2166 -1.1907 0.0000 9 6 1.4908 -2.5114 -0.0006 10 1 0.4152 -2.3348 -0.0005 11 6 1.8719 -3.2934 -1.2312 12 1 2.8946 -3.6090 -1.3753 13 6 0.9147 -3.6060 -2.1731 14 7 -0.3060 -3.1318 -2.0528 15 14 1.3519 -4.7032 -3.6203 16 1 1.1030 -6.1219 -3.2588 17 1 0.5145 -4.3363 -4.7905 18 1 2.7859 -4.5238 -3.9621 19 6 1.8768 -3.3061 1.2486 20 6 1.4710 -2.5214 2.4978 21 6 1.1559 -4.6556 1.2374 22 1 -0.3633 0.0003 1.0277 23 1 -0.3633 0.8897 -0.5142 24 1 -0.3633 -0.8902 -0.5135 25 1 4.1609 2.0750 0.0001 26 1 4.1582 -2.0752 0.0052 27 1 -0.9793 -3.3514 -2.7156 28 1 2.9544 -3.4698 1.2564 29 1 1.9846 -1.5600 2.5057 30 1 0.3934 -2.3577 2.4900 31 1 1.7456 -3.0878 3.3877 32 1 1.5211 -5.2557 0.4040 33 1 1.3493 -5.1785 2.1740 34 1 0.0837 -4.4939 1.1263 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260378271.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:50:09 Heat of formation + Delta-G solvation = -1.579781 kcal Electronic energy + Delta-G solvation = -17056.562376 eV Core-core repulsion = 14400.203881 eV Total energy + Delta-G solvation = -2656.358495 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 253.093 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -39.82770 -36.40471 -35.94991 -33.04765 -32.38655 -30.54587 -27.67089 -26.82499 -26.04183 -23.76733 -22.07291 -20.96543 -18.89995 -16.88517 -16.06447 -15.74995 -14.93938 -14.63017 -14.05784 -13.84009 -13.08359 -12.95258 -12.41778 -12.27283 -12.11790 -11.96457 -11.66835 -11.51023 -11.39116 -11.11441 -10.99455 -10.74602 -10.69343 -10.33166 -10.10715 -10.02539 -9.57831 -9.23601 -8.72095 -8.56548 -8.52443 -7.97292 -6.20400 -4.20888 1.62678 1.91597 2.50606 3.22052 3.30025 3.33149 4.28019 4.40443 5.01771 5.13673 5.29104 5.52833 5.61538 5.83644 5.91433 6.00810 6.06147 6.13072 6.24001 6.36134 6.48485 6.59762 6.63174 6.63218 6.72519 6.86712 6.95533 7.11300 7.23147 7.30413 7.44385 7.66276 7.79413 8.19159 8.52094 8.86917 9.41532 10.88289 Molecular weight = 253.09amu Principal moments of inertia in cm(-1) A = 0.020343 B = 0.008185 C = 0.007384 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1376.053314 B = 3420.091368 C = 3791.002450 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.125 4.125 2 C -0.044 4.044 3 C -0.090 4.090 4 Cl -0.081 7.081 5 C 0.074 3.926 6 N -0.481 5.481 7 C 0.096 3.904 8 C -0.056 4.056 9 C 0.061 3.939 10 H 0.091 0.909 11 C -0.505 4.505 12 H 0.057 0.943 13 C 0.072 3.928 14 N -0.887 5.887 15 Si 0.890 3.110 16 H -0.278 1.278 17 H -0.287 1.287 18 H -0.273 1.273 19 C -0.083 4.083 20 C -0.146 4.146 21 C -0.123 4.123 22 H 0.065 0.935 23 H 0.061 0.939 24 H 0.109 0.891 25 H 0.149 0.851 26 H 0.154 0.846 27 H 0.264 0.736 28 H 0.051 0.949 29 H 0.042 0.958 30 H 0.048 0.952 31 H 0.039 0.961 32 H 0.061 0.939 33 H 0.026 0.974 34 H 0.048 0.952 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.400 4.745 5.255 7.217 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C -0.052 4.052 3 C -0.118 4.118 4 Cl -0.052 7.052 5 C -0.084 4.084 6 N -0.190 5.190 7 C -0.061 4.061 8 C -0.059 4.059 9 C 0.042 3.958 10 H 0.109 0.891 11 C -0.542 4.542 12 H 0.075 0.925 13 C -0.131 4.131 14 N -0.524 5.524 15 Si 0.718 3.282 16 H -0.204 1.204 17 H -0.212 1.212 18 H -0.198 1.198 19 C -0.102 4.102 20 C -0.203 4.203 21 C -0.180 4.180 22 H 0.084 0.916 23 H 0.080 0.920 24 H 0.128 0.872 25 H 0.166 0.834 26 H 0.171 0.829 27 H 0.074 0.926 28 H 0.069 0.931 29 H 0.061 0.939 30 H 0.067 0.933 31 H 0.058 0.942 32 H 0.080 0.920 33 H 0.045 0.955 34 H 0.067 0.933 Dipole moment (debyes) X Y Z Total from point charges 2.050 4.878 5.155 7.387 hybrid contribution -0.725 -0.297 -0.969 1.246 sum 1.325 4.581 4.186 6.345 Atomic orbital electron populations 1.20979 0.89936 1.05028 1.02197 1.20162 0.97461 0.90650 0.96953 1.21995 0.93731 0.86737 1.09374 1.98306 1.78897 1.30910 1.97128 1.22349 0.89248 0.96739 1.00047 1.67700 1.40312 0.98176 1.12820 1.22639 0.92258 0.95214 0.95956 1.21723 0.94520 0.97347 0.92275 1.18356 0.98737 0.86049 0.92618 0.89133 1.20960 0.95339 1.33517 1.04397 0.92457 1.24926 0.95089 0.95499 0.97635 1.69810 1.02792 1.43830 1.35952 0.86611 0.78626 0.80964 0.82009 1.20435 1.21236 1.19787 1.21236 0.98823 0.95596 0.94563 1.21911 1.00907 0.99552 0.97928 1.21564 1.00430 0.96721 0.99314 0.91629 0.91984 0.87232 0.83409 0.82874 0.92578 0.93051 0.93927 0.93258 0.94225 0.91978 0.95457 0.93322 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.32 9.09 36.00 0.33 -2.00 16 2 C -0.04 -0.87 5.92 -104.29 -0.62 -1.48 16 3 C -0.09 -1.62 6.34 -39.36 -0.25 -1.87 16 4 Cl -0.08 -1.25 27.48 -51.86 -1.42 -2.68 16 5 C 0.07 1.31 10.99 -17.51 -0.19 1.12 16 6 N -0.48 -9.35 10.36 -13.22 -0.14 -9.49 16 7 C 0.10 1.93 10.00 -17.54 -0.18 1.75 16 8 C -0.06 -1.17 3.55 -104.49 -0.37 -1.54 16 9 C 0.06 1.34 1.70 -92.92 -0.16 1.18 16 10 H 0.09 2.14 4.41 -51.93 -0.23 1.91 16 11 C -0.50 -12.31 6.76 -34.44 -0.23 -12.54 16 12 H 0.06 1.41 7.82 -52.49 -0.41 1.00 16 13 C 0.07 1.81 5.45 -17.82 -0.10 1.71 16 14 N -0.89 -22.99 12.50 55.43 0.69 -22.30 16 15 Si 0.89 20.09 29.54 -169.99 -5.02 15.07 16 16 H -0.28 -6.22 7.11 56.52 0.40 -5.82 16 17 H -0.29 -6.54 7.11 56.52 0.40 -6.14 16 18 H -0.27 -6.19 7.11 56.52 0.40 -5.79 16 19 C -0.08 -1.60 2.33 -90.62 -0.21 -1.81 16 20 C -0.15 -2.49 8.96 37.16 0.33 -2.16 16 21 C -0.12 -2.33 8.82 37.16 0.33 -2.00 16 22 H 0.07 1.10 8.14 -51.93 -0.42 0.68 16 23 H 0.06 1.07 7.03 -51.93 -0.36 0.71 16 24 H 0.11 2.34 6.08 -51.93 -0.32 2.02 16 25 H 0.15 2.20 8.06 -52.49 -0.42 1.78 16 26 H 0.15 2.94 7.57 -52.49 -0.40 2.54 16 27 H 0.26 6.64 8.31 -40.82 -0.34 6.30 16 28 H 0.05 0.97 7.38 -51.93 -0.38 0.59 16 29 H 0.04 0.74 7.24 -51.93 -0.38 0.36 16 30 H 0.05 0.83 8.14 -51.93 -0.42 0.41 16 31 H 0.04 0.60 8.14 -51.93 -0.42 0.18 16 32 H 0.06 1.25 7.41 -51.93 -0.38 0.87 16 33 H 0.03 0.44 8.14 -51.93 -0.42 0.02 16 34 H 0.05 0.96 8.14 -51.93 -0.42 0.54 16 LS Contribution 293.13 15.07 4.42 4.42 Total: -1.00 -25.14 293.13 -7.32 -32.46 By element: Atomic # 1 Polarization: 6.69 SS G_CDS: -4.53 Total: 2.16 kcal Atomic # 6 Polarization: -18.32 SS G_CDS: -1.32 Total: -19.64 kcal Atomic # 7 Polarization: -32.34 SS G_CDS: 0.56 Total: -31.78 kcal Atomic # 14 Polarization: 20.09 SS G_CDS: -5.02 Total: 15.07 kcal Atomic # 17 Polarization: -1.25 SS G_CDS: -1.42 Total: -2.68 kcal Total LS contribution 4.42 Total: 4.42 kcal Total: -25.14 -7.32 -32.46 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260378271.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.880 kcal (2) G-P(sol) polarization free energy of solvation -25.136 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 5.744 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.324 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.460 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.580 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds