Wall clock time and date at job start Mon Mar 30 2020 07:24:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 H 1.09001 * 109.35597 * 2 1 4 4 C 1.53004 * 109.41540 * 119.82750 * 2 1 3 5 5 C 1.53420 * 109.82085 * 192.07494 * 4 2 1 6 6 C 1.50792 * 108.11689 * 309.35420 * 5 4 2 7 7 C 1.34093 * 128.94561 * 196.73322 * 6 5 4 8 8 Cl 1.73598 * 125.98065 * 359.61718 * 7 6 5 9 9 N 1.36661 * 108.03902 * 179.62214 * 7 6 5 10 10 C 1.46504 * 125.60849 * 180.02562 * 9 7 6 11 11 C 1.36807 * 108.78960 * 0.06227 * 9 7 6 12 12 C 1.33950 * 108.06246 * 0.06503 * 11 9 7 13 13 C 1.50788 * 128.94464 * 179.78666 * 12 11 9 14 14 H 1.09002 * 109.77195 * 76.87211 * 13 12 11 15 15 C 1.50706 * 109.73513 * 316.20625 * 13 12 11 16 16 H 1.07992 * 120.00362 * 276.57577 * 15 13 12 17 17 C 1.37880 * 119.99843 * 96.57493 * 15 13 12 18 18 N 1.31510 * 120.00107 * 184.72256 * 17 15 13 19 19 Si 1.86798 * 120.00006 * 4.71401 * 17 15 13 20 20 H 1.48504 * 109.47130 * 85.39510 * 19 17 15 21 21 H 1.48503 * 109.47311 * 205.39281 * 19 17 15 22 22 H 1.48494 * 109.47576 * 325.39379 * 19 17 15 23 23 H 1.09003 * 109.46721 * 300.17884 * 1 2 3 24 24 H 1.08997 * 109.47136 * 60.17449 * 1 2 3 25 25 H 1.08997 * 109.46979 * 180.17589 * 1 2 3 26 26 H 1.09001 * 109.41135 * 312.17673 * 4 2 1 27 27 H 1.08993 * 109.41887 * 71.96379 * 4 2 1 28 28 H 1.09001 * 109.73523 * 69.01153 * 5 4 2 29 29 H 1.09002 * 109.73081 * 189.69940 * 5 4 2 30 30 H 1.09003 * 109.46904 * 269.99673 * 10 9 7 31 31 H 1.08995 * 109.47190 * 29.99534 * 10 9 7 32 32 H 1.09000 * 109.47089 * 150.00010 * 10 9 7 33 33 H 1.07995 * 125.97034 * 180.02562 * 11 9 7 34 34 H 0.96998 * 120.00582 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8913 1.0284 0.0000 4 6 2.0386 -0.7177 1.2519 5 6 3.5426 -0.4665 1.4207 6 6 4.2210 -0.7847 0.1121 7 6 5.5209 -1.0059 -0.1316 8 17 6.7990 -0.9712 1.0427 9 7 5.6635 -1.2634 -1.4661 10 6 6.9263 -1.5582 -2.1479 11 6 4.4332 -1.1997 -2.0611 12 6 3.5299 -0.9055 -1.1168 13 6 2.0400 -0.7196 -1.2554 14 1 1.5540 -1.6911 -1.3457 15 6 1.7424 0.1134 -2.4756 16 1 1.7889 1.1908 -2.4184 17 6 1.4107 -0.5001 -3.6650 18 7 1.2420 0.2206 -4.7520 19 14 1.2012 -2.3551 -3.7325 20 1 -0.1849 -2.7115 -3.3362 21 1 1.4590 -2.8324 -5.1149 22 1 2.1629 -2.9962 -2.8001 23 1 -0.3633 0.5166 0.8884 24 1 -0.3633 0.5111 -0.8915 25 1 -0.3633 -1.0276 0.0032 26 1 1.5080 -0.3409 2.1263 27 1 1.8589 -1.7883 1.1540 28 1 3.7145 0.5782 1.6798 29 1 3.9375 -1.1109 2.2061 30 1 7.3770 -0.6287 -2.4957 31 1 7.6059 -2.0545 -1.4552 32 1 6.7355 -2.2106 -3.0000 33 1 4.2264 -1.3584 -3.1091 34 1 1.0090 -0.2109 -5.5889 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260421247.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:24:10 Heat of formation + Delta-G solvation = 25.368306 kcal Electronic energy + Delta-G solvation = -17122.845631 eV Core-core repulsion = 14467.655693 eV Total energy + Delta-G solvation = -2655.189938 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 253.093 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -40.81356 -36.79961 -36.20282 -32.91339 -32.11513 -30.77126 -28.19245 -26.97691 -25.01110 -23.78458 -21.52706 -19.87307 -19.31306 -17.84803 -16.89135 -16.20220 -15.04935 -14.43736 -14.04142 -13.72921 -13.49423 -13.01286 -12.74814 -12.54368 -12.35845 -12.27069 -11.90898 -11.65438 -11.31912 -11.01411 -10.92436 -10.83638 -10.74053 -10.59764 -10.16708 -9.78072 -9.58871 -9.29576 -9.01127 -8.50031 -7.58404 -7.23634 -6.03869 -4.00423 2.22675 2.67326 3.28188 3.38100 3.43411 3.54832 3.73324 4.44444 5.00205 5.28922 5.36449 5.54577 5.58002 5.61546 5.68926 5.84371 6.12919 6.20350 6.27817 6.35981 6.47682 6.56477 6.64219 6.68018 6.81008 6.86213 7.10920 7.16552 7.26594 7.48219 7.64330 7.70334 7.91504 7.97696 8.60296 9.04274 9.59757 11.09501 Molecular weight = 253.09amu Principal moments of inertia in cm(-1) A = 0.021338 B = 0.009467 C = 0.007223 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1311.886107 B = 2956.823728 C = 3875.324609 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C -0.074 4.074 3 H 0.062 0.938 4 C -0.112 4.112 5 C -0.040 4.040 6 C -0.142 4.142 7 C 0.046 3.954 8 Cl -0.051 7.051 9 N -0.463 5.463 10 C 0.077 3.923 11 C 0.016 3.984 12 C -0.113 4.113 13 C 0.082 3.918 14 H 0.039 0.961 15 C -0.491 4.491 16 H 0.074 0.926 17 C 0.071 3.929 18 N -0.902 5.902 19 Si 0.861 3.139 20 H -0.275 1.275 21 H -0.292 1.292 22 H -0.259 1.259 23 H 0.034 0.966 24 H 0.067 0.933 25 H 0.040 0.960 26 H 0.052 0.948 27 H 0.055 0.945 28 H 0.064 0.936 29 H 0.059 0.941 30 H 0.068 0.932 31 H 0.075 0.925 32 H 0.081 0.919 33 H 0.165 0.835 34 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.021 -4.126 8.960 12.714 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.193 4.193 2 C -0.093 4.093 3 H 0.081 0.919 4 C -0.149 4.149 5 C -0.078 4.078 6 C -0.152 4.152 7 C -0.088 4.088 8 Cl -0.023 7.023 9 N -0.145 5.145 10 C -0.065 4.065 11 C -0.110 4.110 12 C -0.119 4.119 13 C 0.063 3.937 14 H 0.057 0.943 15 C -0.529 4.529 16 H 0.092 0.908 17 C -0.129 4.129 18 N -0.541 5.541 19 Si 0.688 3.312 20 H -0.201 1.201 21 H -0.218 1.218 22 H -0.184 1.184 23 H 0.053 0.947 24 H 0.086 0.914 25 H 0.060 0.940 26 H 0.071 0.929 27 H 0.074 0.926 28 H 0.082 0.918 29 H 0.077 0.923 30 H 0.086 0.914 31 H 0.094 0.906 32 H 0.100 0.900 33 H 0.182 0.818 34 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges 8.411 -4.210 8.676 12.796 hybrid contribution 0.290 -0.992 -0.302 1.077 sum 8.701 -5.203 8.374 13.149 Atomic orbital electron populations 1.21721 0.96094 1.00582 1.00896 1.21111 0.94745 0.99505 0.93956 0.91932 1.21672 0.94399 1.00622 0.98249 1.19979 0.94883 1.00288 0.92608 1.19274 0.89905 1.08954 0.97038 1.20084 0.88900 1.17700 0.82146 1.98297 1.51623 1.97785 1.54620 1.43921 1.07591 1.57567 1.05406 1.21880 0.84688 1.01846 0.98055 1.21389 0.81326 1.09430 0.98902 1.20242 0.98187 1.03418 0.90094 1.17866 0.85951 0.95806 0.94110 0.94275 1.20928 1.45234 0.94657 0.92121 0.90833 1.25013 0.95110 0.97239 0.95562 1.69904 1.48765 1.35536 0.99879 0.87098 0.79637 0.87396 0.77026 1.20109 1.21814 1.18360 0.94651 0.91365 0.94043 0.92903 0.92608 0.91794 0.92285 0.91377 0.90622 0.89986 0.81798 0.92831 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.54 9.01 37.16 0.33 -2.20 16 2 C -0.07 -1.49 2.09 -90.40 -0.19 -1.68 16 3 H 0.06 1.32 8.07 -51.93 -0.42 0.90 16 4 C -0.11 -1.91 5.17 -26.51 -0.14 -2.05 16 5 C -0.04 -0.67 6.18 -27.62 -0.17 -0.85 16 6 C -0.14 -2.79 5.92 -104.80 -0.62 -3.41 16 7 C 0.05 0.84 7.40 -16.86 -0.12 0.71 16 8 Cl -0.05 -0.76 28.63 -51.86 -1.48 -2.24 16 9 N -0.46 -8.35 3.17 -121.29 -0.38 -8.74 16 10 C 0.08 1.01 10.96 59.85 0.66 1.67 16 11 C 0.02 0.33 10.99 -16.84 -0.19 0.15 16 12 C -0.11 -2.50 5.43 -104.85 -0.57 -3.07 16 13 C 0.08 1.90 1.57 -92.66 -0.15 1.75 16 14 H 0.04 0.94 5.25 -51.93 -0.27 0.66 16 15 C -0.49 -13.18 7.77 -34.44 -0.27 -13.45 16 16 H 0.07 2.19 8.06 -52.49 -0.42 1.77 16 17 C 0.07 1.97 5.47 -17.82 -0.10 1.88 16 18 N -0.90 -26.70 13.96 55.43 0.77 -25.93 16 19 Si 0.86 20.80 26.75 -169.99 -4.55 16.25 16 20 H -0.28 -6.61 7.11 56.52 0.40 -6.21 16 21 H -0.29 -7.06 7.11 56.52 0.40 -6.66 16 22 H -0.26 -6.05 6.78 56.52 0.38 -5.67 16 23 H 0.03 0.56 8.14 -51.93 -0.42 0.14 16 24 H 0.07 1.41 7.55 -51.93 -0.39 1.02 16 25 H 0.04 0.74 8.14 -51.93 -0.42 0.32 16 26 H 0.05 0.78 8.09 -51.93 -0.42 0.36 16 27 H 0.06 0.96 8.10 -51.93 -0.42 0.54 16 28 H 0.06 1.04 8.14 -51.93 -0.42 0.62 16 29 H 0.06 0.90 8.14 -51.93 -0.42 0.47 16 30 H 0.07 0.82 8.14 -51.93 -0.42 0.40 16 31 H 0.08 0.86 7.79 -51.93 -0.40 0.46 16 32 H 0.08 0.95 8.14 -51.93 -0.42 0.52 16 33 H 0.16 3.52 7.80 -52.49 -0.41 3.11 16 34 H 0.26 7.33 8.31 -40.82 -0.34 7.00 16 LS Contribution 289.34 15.07 4.36 4.36 Total: -1.00 -29.46 289.34 -7.65 -37.11 By element: Atomic # 1 Polarization: 4.59 SS G_CDS: -4.85 Total: -0.26 kcal Atomic # 6 Polarization: -19.03 SS G_CDS: -1.52 Total: -20.55 kcal Atomic # 7 Polarization: -35.06 SS G_CDS: 0.39 Total: -34.67 kcal Atomic # 14 Polarization: 20.80 SS G_CDS: -4.55 Total: 16.25 kcal Atomic # 17 Polarization: -0.76 SS G_CDS: -1.48 Total: -2.24 kcal Total LS contribution 4.36 Total: 4.36 kcal Total: -29.46 -7.65 -37.11 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260421247.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 62.477 kcal (2) G-P(sol) polarization free energy of solvation -29.460 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.018 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.649 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.109 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.368 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds