Wall clock time and date at job start Mon Mar 30 2020 06:39:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 C 1.38265 * 119.98921 * 2 1 4 4 C 1.38195 * 120.01334 * 180.02562 * 3 2 1 5 5 C 1.38368 * 119.98769 * 359.97438 * 4 3 2 6 6 Cl 1.73602 * 120.01304 * 180.02562 * 5 4 3 7 7 C 1.38333 * 119.97477 * 0.02562 * 5 4 3 8 8 C 1.50704 * 120.00535 * 179.97438 * 7 5 4 9 9 H 1.09001 * 109.47416 * 14.62977 * 8 7 5 10 10 N 1.46896 * 109.47185 * 134.63539 * 8 7 5 11 11 C 1.53007 * 109.46576 * 254.62975 * 8 7 5 12 12 C 1.50696 * 109.46525 * 175.10663 * 11 8 7 13 13 H 1.08000 * 120.00648 * 0.02562 * 12 11 8 14 14 C 1.37888 * 119.99869 * 180.02562 * 12 11 8 15 15 N 1.31513 * 119.99427 * 0.02562 * 14 12 11 16 16 Si 1.86800 * 120.00196 * 180.02562 * 14 12 11 17 17 H 1.48494 * 109.46957 * 89.99777 * 16 14 12 18 18 H 1.48501 * 109.47019 * 209.99998 * 16 14 12 19 19 H 1.48496 * 109.46820 * 329.99947 * 16 14 12 20 20 C 1.38226 * 119.98782 * 180.27645 * 2 1 3 21 21 C 1.50697 * 119.99283 * 359.97438 * 20 2 1 22 22 H 1.09003 * 109.47009 * 90.00027 * 1 2 3 23 23 H 1.09000 * 109.47477 * 210.00288 * 1 2 3 24 24 H 1.09002 * 109.46870 * 330.00379 * 1 2 3 25 25 H 1.07998 * 119.99466 * 359.97438 * 3 2 1 26 26 H 1.08007 * 120.00478 * 179.97438 * 4 3 2 27 27 H 1.00906 * 111.00296 * 76.45294 * 10 8 7 28 28 H 1.00899 * 111.00407 * 200.41475 * 10 8 7 29 29 H 1.09002 * 109.46989 * 55.10971 * 11 8 7 30 30 H 1.08998 * 109.47394 * 295.10460 * 11 8 7 31 31 H 0.97001 * 119.99865 * 179.97438 * 15 14 12 32 32 H 1.09001 * 109.47446 * 264.53869 * 21 20 2 33 33 H 1.09005 * 109.47377 * 24.53419 * 21 20 2 34 34 H 1.08995 * 109.47500 * 144.53264 * 21 20 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1980 1.1975 0.0000 4 6 3.5800 1.1981 -0.0005 5 6 4.2721 0.0000 -0.0005 6 17 6.0081 -0.0001 -0.0005 7 6 3.5801 -1.1979 -0.0005 8 6 4.3332 -2.5033 -0.0011 9 1 5.3762 -2.3212 0.2581 10 7 3.7354 -3.4139 0.9844 11 6 4.2563 -3.1357 -1.3922 12 6 5.1077 -4.3786 -1.4266 13 1 5.6492 -4.6869 -0.5445 14 6 5.1955 -5.1223 -2.5844 15 7 4.5365 -4.7466 -3.6587 16 14 6.2503 -6.6634 -2.6269 17 1 5.4298 -7.8359 -2.2307 18 1 6.7736 -6.8672 -4.0016 19 1 7.3860 -6.5120 -1.6823 20 6 2.1978 -1.1972 -0.0058 21 6 1.4439 -2.5020 -0.0115 22 1 -0.3633 0.0000 -1.0277 23 1 -0.3634 -0.8899 0.5139 24 1 -0.3633 0.8900 0.5138 25 1 1.6578 2.1327 -0.0004 26 1 4.1197 2.1337 -0.0010 27 1 2.8748 -3.8092 0.6362 28 1 4.3858 -4.1388 1.2481 29 1 4.6199 -2.4255 -2.1348 30 1 3.2220 -3.3975 -1.6157 31 1 4.5985 -5.2695 -4.4734 32 1 1.3472 -2.8703 1.0099 33 1 0.4524 -2.3470 -0.4371 34 1 1.9865 -3.2326 -0.6113 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260452220.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:39:34 Heat of formation + Delta-G solvation = 6.855884 kcal Electronic energy + Delta-G solvation = -16718.860897 eV Core-core repulsion = 14062.868200 eV Total energy + Delta-G solvation = -2655.992697 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 253.093 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -39.70198 -36.13404 -35.79936 -32.87157 -32.59936 -30.53388 -28.34409 -27.43657 -26.08307 -24.25780 -21.74018 -20.61098 -19.64137 -16.83282 -16.01684 -15.83765 -14.74485 -14.65124 -14.14908 -13.95976 -13.35803 -12.97070 -12.82944 -12.67973 -12.60064 -12.32186 -11.99325 -11.77147 -11.48501 -11.18838 -11.00704 -10.79304 -10.70631 -10.63073 -10.36104 -9.96451 -9.78952 -9.07530 -8.47703 -8.25240 -8.07786 -7.68663 -6.08386 -4.12355 1.52085 1.68721 2.60827 3.26182 3.33526 3.36585 3.93931 4.38626 5.01559 5.07539 5.13797 5.26632 5.41804 5.43303 5.68883 5.71784 5.80790 5.92376 5.96909 6.08204 6.12079 6.27214 6.31989 6.52544 6.55474 6.74125 6.80661 7.02239 7.19848 7.49265 7.58960 7.86090 8.05285 8.23503 8.32348 8.93482 9.52318 11.02160 Molecular weight = 253.09amu Principal moments of inertia in cm(-1) A = 0.022954 B = 0.007130 C = 0.006071 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1219.532781 B = 3926.392932 C = 4611.298594 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.090 4.090 3 C -0.123 4.123 4 C -0.118 4.118 5 C -0.037 4.037 6 Cl -0.074 7.074 7 C -0.035 4.035 8 C 0.118 3.882 9 H 0.084 0.916 10 N -0.845 5.845 11 C 0.002 3.998 12 C -0.524 4.524 13 H 0.055 0.945 14 C 0.061 3.939 15 N -0.890 5.890 16 Si 0.892 3.108 17 H -0.280 1.280 18 H -0.286 1.286 19 H -0.273 1.273 20 C -0.055 4.055 21 C -0.131 4.131 22 H 0.068 0.932 23 H 0.069 0.931 24 H 0.062 0.938 25 H 0.123 0.877 26 H 0.125 0.875 27 H 0.339 0.661 28 H 0.339 0.661 29 H 0.020 0.980 30 H 0.025 0.975 31 H 0.261 0.739 32 H 0.079 0.921 33 H 0.060 0.940 34 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.986 9.168 7.303 13.161 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.090 4.090 3 C -0.142 4.142 4 C -0.137 4.137 5 C -0.064 4.064 6 Cl -0.045 7.045 7 C -0.037 4.037 8 C 0.007 3.993 9 H 0.102 0.898 10 N -0.377 5.377 11 C -0.036 4.036 12 C -0.562 4.562 13 H 0.073 0.927 14 C -0.141 4.141 15 N -0.529 5.529 16 Si 0.720 3.280 17 H -0.207 1.207 18 H -0.212 1.212 19 H -0.198 1.198 20 C -0.055 4.055 21 C -0.187 4.187 22 H 0.087 0.913 23 H 0.088 0.912 24 H 0.081 0.919 25 H 0.141 0.859 26 H 0.143 0.857 27 H 0.156 0.844 28 H 0.151 0.849 29 H 0.038 0.962 30 H 0.043 0.957 31 H 0.071 0.929 32 H 0.097 0.903 33 H 0.079 0.921 34 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -5.916 9.748 7.587 13.696 hybrid contribution 1.013 -1.431 -1.006 2.021 sum -4.903 8.317 6.581 11.684 Atomic orbital electron populations 1.20790 0.91376 1.02517 1.02188 1.19799 0.95974 0.92646 1.00626 1.20761 0.93174 0.97422 1.02804 1.20851 0.94221 0.96339 1.02273 1.20745 0.84243 0.94618 1.06793 1.98337 1.10473 1.98668 1.96986 1.19929 0.93204 0.94673 0.95846 1.20609 0.96457 0.87916 0.94304 0.89809 1.59464 1.09835 1.24329 1.44095 1.19810 0.97614 0.95607 0.90608 1.21129 1.28809 1.08824 0.97412 0.92651 1.25001 0.95673 0.97831 0.95634 1.69968 1.41937 1.39147 1.01813 0.86596 0.80738 0.83338 0.77372 1.20653 1.21205 1.19834 1.19453 0.92302 0.94997 0.98796 1.21264 0.99388 0.95046 1.02969 0.91285 0.91186 0.91931 0.85928 0.85684 0.84414 0.84919 0.96160 0.95661 0.92907 0.90286 0.92122 0.89001 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.27 9.18 36.00 0.33 -0.94 16 2 C -0.09 -1.34 5.88 -104.62 -0.62 -1.96 16 3 C -0.12 -1.73 9.70 -39.59 -0.38 -2.12 16 4 C -0.12 -1.81 9.83 -39.55 -0.39 -2.20 16 5 C -0.04 -0.67 6.31 -39.50 -0.25 -0.92 16 6 Cl -0.07 -1.29 27.07 -51.86 -1.40 -2.70 16 7 C -0.04 -0.68 4.95 -104.59 -0.52 -1.19 16 8 C 0.12 2.48 2.61 -68.86 -0.18 2.30 16 9 H 0.08 1.83 6.36 -51.93 -0.33 1.50 16 10 N -0.85 -15.86 8.40 -5.65 -0.05 -15.90 16 11 C 0.00 0.04 4.33 -27.88 -0.12 -0.08 16 12 C -0.52 -14.13 8.75 -34.44 -0.30 -14.43 16 13 H 0.06 1.45 7.30 -52.49 -0.38 1.07 16 14 C 0.06 1.69 5.46 -17.82 -0.10 1.59 16 15 N -0.89 -26.10 13.29 55.43 0.74 -25.36 16 16 Si 0.89 21.22 29.54 -169.99 -5.02 16.20 16 17 H -0.28 -6.56 7.11 56.52 0.40 -6.15 16 18 H -0.29 -6.82 7.11 56.52 0.40 -6.42 16 19 H -0.27 -6.42 7.11 56.52 0.40 -6.02 16 20 C -0.05 -0.95 5.78 -104.63 -0.60 -1.55 16 21 C -0.13 -2.06 7.29 36.00 0.26 -1.80 16 22 H 0.07 0.74 8.14 -51.93 -0.42 0.32 16 23 H 0.07 0.75 6.60 -51.93 -0.34 0.41 16 24 H 0.06 0.59 8.09 -51.93 -0.42 0.17 16 25 H 0.12 1.34 8.06 -52.49 -0.42 0.92 16 26 H 0.13 1.61 8.06 -52.48 -0.42 1.19 16 27 H 0.34 6.12 4.85 -39.29 -0.19 5.93 16 28 H 0.34 6.27 8.48 -39.29 -0.33 5.94 16 29 H 0.02 0.56 8.14 -51.93 -0.42 0.14 16 30 H 0.03 0.66 5.59 -51.93 -0.29 0.37 16 31 H 0.26 7.27 8.31 -40.82 -0.34 6.93 16 32 H 0.08 1.15 7.32 -51.93 -0.38 0.77 16 33 H 0.06 0.82 6.40 -51.93 -0.33 0.49 16 34 H 0.09 1.69 3.65 -51.93 -0.19 1.50 16 LS Contribution 285.06 15.07 4.30 4.30 Total: -1.00 -29.38 285.06 -8.32 -37.71 By element: Atomic # 1 Polarization: 13.07 SS G_CDS: -4.02 Total: 9.05 kcal Atomic # 6 Polarization: -20.42 SS G_CDS: -2.87 Total: -23.29 kcal Atomic # 7 Polarization: -41.96 SS G_CDS: 0.69 Total: -41.27 kcal Atomic # 14 Polarization: 21.22 SS G_CDS: -5.02 Total: 16.20 kcal Atomic # 17 Polarization: -1.29 SS G_CDS: -1.40 Total: -2.70 kcal Total LS contribution 4.30 Total: 4.30 kcal Total: -29.38 -8.32 -37.71 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260452220.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.563 kcal (2) G-P(sol) polarization free energy of solvation -29.382 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.181 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.325 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.707 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.856 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds