Wall clock time and date at job start Mon Mar 30 2020 06:16:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46896 * 1 3 3 C 1.46902 * 110.99954 * 2 1 4 4 C 1.39672 * 111.00359 * 123.95395 * 2 1 3 5 5 C 1.38942 * 120.06463 * 299.73037 * 4 2 1 6 6 C 1.38097 * 119.94852 * 179.71565 * 5 4 2 7 7 C 1.38286 * 120.08414 * 0.55670 * 6 5 4 8 8 C 1.38384 * 120.13923 * 359.71401 * 7 6 5 9 9 Cl 1.73603 * 119.97622 * 180.02562 * 8 7 6 10 10 C 1.38243 * 120.04839 * 0.02562 * 8 7 6 11 11 C 1.50698 * 120.04339 * 179.97438 * 10 8 7 12 12 H 1.08996 * 109.47304 * 346.51139 * 11 10 8 13 13 N 1.46901 * 109.46754 * 226.51594 * 11 10 8 14 14 C 1.50692 * 109.47156 * 106.51667 * 11 10 8 15 15 H 1.07999 * 120.00380 * 359.97438 * 14 11 10 16 16 C 1.37884 * 120.00093 * 179.97438 * 14 11 10 17 17 N 1.31511 * 120.00058 * 0.02562 * 16 14 11 18 18 Si 1.86797 * 120.00181 * 179.97438 * 16 14 11 19 19 H 1.48505 * 109.46925 * 359.97438 * 18 16 14 20 20 H 1.48494 * 109.47314 * 119.99926 * 18 16 14 21 21 H 1.48502 * 109.47420 * 240.00415 * 18 16 14 22 22 H 1.08998 * 109.46914 * 56.04862 * 1 2 3 23 23 H 1.09000 * 109.47000 * 176.04499 * 1 2 3 24 24 H 1.08997 * 109.47025 * 296.04486 * 1 2 3 25 25 H 1.08997 * 109.47117 * 59.99970 * 3 2 1 26 26 H 1.08999 * 109.47094 * 180.02562 * 3 2 1 27 27 H 1.08994 * 109.47135 * 299.99715 * 3 2 1 28 28 H 1.07994 * 120.02632 * 359.97314 * 5 4 2 29 29 H 1.07993 * 119.95596 * 180.24892 * 6 5 4 30 30 H 1.08002 * 119.92854 * 179.70203 * 7 6 5 31 31 H 1.00902 * 111.00349 * 291.30652 * 13 11 10 32 32 H 1.00900 * 111.00383 * 55.26422 * 13 11 10 33 33 H 0.96993 * 120.00333 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3715 0.0000 4 6 1.9696 -0.7283 1.0816 5 6 1.6624 -0.3444 2.3811 6 6 2.1538 -1.0697 3.4486 7 6 2.9606 -2.1705 3.2260 8 6 3.2735 -2.5527 1.9333 9 17 4.2862 -3.9357 1.6587 10 6 2.7802 -1.8339 0.8604 11 6 3.1214 -2.2498 -0.5473 12 1 3.9403 -2.9689 -0.5253 13 7 3.5271 -1.0694 -1.3218 14 6 1.9145 -2.8824 -1.1907 15 1 0.9926 -2.9745 -0.6357 16 6 1.9871 -3.3437 -2.4881 17 7 3.1098 -3.2320 -3.1638 18 14 0.4912 -4.1285 -3.2854 19 1 -0.6375 -4.1358 -2.3203 20 1 0.1075 -3.3507 -4.4908 21 1 0.8145 -5.5235 -3.6787 22 1 -0.3633 0.5739 -0.8525 23 1 -0.3633 -1.0252 -0.0709 24 1 -0.3633 0.4512 0.9233 25 1 1.6459 1.8948 0.8900 26 1 3.0850 1.3424 -0.0005 27 1 1.6460 1.8947 -0.8900 28 1 1.0363 0.5179 2.5562 29 1 1.9118 -0.7738 4.4586 30 1 3.3475 -2.7331 4.0629 31 1 2.7440 -0.4524 -1.4775 32 1 4.2862 -0.5829 -0.8689 33 1 3.1608 -3.5561 -4.0765 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260194026.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:16:42 Heat of formation + Delta-G solvation = 42.386938 kcal Electronic energy + Delta-G solvation = -17385.281726 eV Core-core repulsion = 14665.403860 eV Total energy + Delta-G solvation = -2719.877866 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 254.088 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -39.72297 -36.54633 -35.39730 -34.32175 -31.46612 -29.50387 -29.13507 -27.29252 -25.70236 -24.27104 -22.63075 -20.95427 -19.89421 -16.72610 -16.43598 -15.37390 -15.12808 -14.62856 -14.38640 -14.22272 -13.71779 -13.59469 -12.88239 -12.74415 -12.11551 -12.04718 -11.92674 -11.52459 -11.38209 -11.36527 -10.88583 -10.83482 -10.69551 -10.50143 -10.17846 -9.70314 -9.00766 -8.27759 -8.22062 -8.07310 -7.96920 -6.67647 -5.71435 -3.81630 1.55535 1.80735 2.78415 3.40337 3.48331 3.50812 4.04872 4.27576 4.61169 5.17353 5.34203 5.40899 5.51264 5.53670 5.58025 5.75086 5.82589 5.91395 5.93869 6.06827 6.30550 6.44085 6.59710 6.69856 6.75902 6.92523 7.07696 7.28966 7.73987 7.89052 8.06983 8.37501 8.88796 9.36816 9.46392 9.82174 11.33578 Molecular weight = 254.09amu Principal moments of inertia in cm(-1) A = 0.017630 B = 0.010723 C = 0.008059 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1587.783329 B = 2610.524668 C = 3473.462930 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.036 3.964 2 N -0.483 5.483 3 C 0.026 3.974 4 C 0.096 3.904 5 C -0.152 4.152 6 C -0.128 4.128 7 C -0.119 4.119 8 C -0.035 4.035 9 Cl -0.067 7.067 10 C -0.045 4.045 11 C 0.259 3.741 12 H 0.056 0.944 13 N -0.809 5.809 14 C -0.504 4.504 15 H 0.047 0.953 16 C 0.082 3.918 17 N -0.849 5.849 18 Si 0.878 3.122 19 H -0.276 1.276 20 H -0.286 1.286 21 H -0.287 1.287 22 H 0.069 0.931 23 H 0.076 0.924 24 H 0.019 0.981 25 H 0.022 0.978 26 H 0.067 0.933 27 H 0.072 0.928 28 H 0.114 0.886 29 H 0.120 0.880 30 H 0.123 0.877 31 H 0.344 0.656 32 H 0.282 0.718 33 H 0.252 0.748 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.996 6.715 10.597 12.703 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 N -0.203 5.203 3 C -0.121 4.121 4 C 0.002 3.998 5 C -0.172 4.172 6 C -0.147 4.147 7 C -0.138 4.138 8 C -0.062 4.062 9 Cl -0.038 7.038 10 C -0.050 4.050 11 C 0.149 3.851 12 H 0.073 0.927 13 N -0.339 5.339 14 C -0.543 4.543 15 H 0.066 0.934 16 C -0.123 4.123 17 N -0.484 5.484 18 Si 0.706 3.294 19 H -0.201 1.201 20 H -0.213 1.213 21 H -0.214 1.214 22 H 0.088 0.912 23 H 0.094 0.906 24 H 0.037 0.963 25 H 0.040 0.960 26 H 0.086 0.914 27 H 0.091 0.909 28 H 0.132 0.868 29 H 0.138 0.862 30 H 0.141 0.859 31 H 0.163 0.837 32 H 0.092 0.908 33 H 0.062 0.938 Dipole moment (debyes) X Y Z Total from point charges -1.492 5.837 9.304 11.085 hybrid contribution -1.437 0.384 1.204 1.914 sum -2.929 6.221 10.509 12.559 Atomic orbital electron populations 1.22375 0.86037 1.03183 0.99459 1.59346 1.08235 1.12311 1.40440 1.22498 1.00918 0.88298 1.00394 1.18487 0.97793 0.95478 0.88086 1.21624 1.01550 1.00456 0.93571 1.20669 0.99553 0.96145 0.98326 1.20968 0.99687 0.97939 0.95160 1.20796 0.99180 0.92260 0.94008 1.98337 1.67059 1.41636 1.96735 1.21836 0.91634 0.91075 1.00431 1.18263 0.96807 0.90256 0.79774 0.92683 1.59406 1.12038 1.11300 1.51202 1.20636 0.96211 1.39416 0.98017 0.93439 1.24872 0.95020 0.95264 0.97173 1.70121 1.24518 1.44122 1.09669 0.86801 0.84054 0.79051 0.79500 1.20134 1.21267 1.21360 0.91236 0.90569 0.96265 0.95959 0.91379 0.90881 0.86817 0.86245 0.85917 0.83749 0.90837 0.93802 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.57 9.35 60.06 0.56 1.14 16 2 N -0.48 -8.50 2.09 -186.87 -0.39 -8.89 16 3 C 0.03 0.37 8.50 60.07 0.51 0.88 16 4 C 0.10 1.78 4.50 -83.79 -0.38 1.40 16 5 C -0.15 -2.39 8.62 -39.37 -0.34 -2.73 16 6 C -0.13 -1.88 10.04 -39.62 -0.40 -2.28 16 7 C -0.12 -1.91 9.83 -39.51 -0.39 -2.30 16 8 C -0.03 -0.67 6.31 -39.53 -0.25 -0.92 16 9 Cl -0.07 -1.28 27.06 -51.86 -1.40 -2.69 16 10 C -0.05 -0.96 4.82 -104.39 -0.50 -1.47 16 11 C 0.26 6.45 2.58 -70.02 -0.18 6.27 16 12 H 0.06 1.52 6.33 -51.93 -0.33 1.19 16 13 N -0.81 -19.46 8.36 -6.66 -0.06 -19.51 16 14 C -0.50 -13.76 8.31 -34.44 -0.29 -14.05 16 15 H 0.05 1.32 7.74 -52.49 -0.41 0.92 16 16 C 0.08 2.31 5.39 -17.82 -0.10 2.21 16 17 N -0.85 -25.00 12.77 55.43 0.71 -24.29 16 18 Si 0.88 21.64 29.54 -169.99 -5.02 16.62 16 19 H -0.28 -6.73 7.11 56.52 0.40 -6.33 16 20 H -0.29 -7.05 7.11 56.52 0.40 -6.64 16 21 H -0.29 -7.10 7.11 56.52 0.40 -6.70 16 22 H 0.07 0.99 8.14 -51.93 -0.42 0.56 16 23 H 0.08 1.37 8.14 -51.93 -0.42 0.95 16 24 H 0.02 0.26 7.14 -51.93 -0.37 -0.11 16 25 H 0.02 0.28 7.46 -51.93 -0.39 -0.11 16 26 H 0.07 1.00 8.12 -51.93 -0.42 0.58 16 27 H 0.07 0.94 8.14 -51.93 -0.42 0.52 16 28 H 0.11 1.55 7.05 -52.49 -0.37 1.18 16 29 H 0.12 1.38 8.06 -52.49 -0.42 0.95 16 30 H 0.12 1.67 8.06 -52.49 -0.42 1.25 16 31 H 0.34 7.97 5.47 -39.29 -0.22 7.75 16 32 H 0.28 6.23 8.98 -39.29 -0.35 5.87 16 33 H 0.25 7.13 8.31 -40.82 -0.34 6.80 16 LS Contribution 286.50 15.07 4.32 4.32 Total: -1.00 -29.97 286.50 -7.69 -37.67 By element: Atomic # 1 Polarization: 12.72 SS G_CDS: -4.10 Total: 8.62 kcal Atomic # 6 Polarization: -10.09 SS G_CDS: -1.75 Total: -11.84 kcal Atomic # 7 Polarization: -52.96 SS G_CDS: 0.26 Total: -52.70 kcal Atomic # 14 Polarization: 21.64 SS G_CDS: -5.02 Total: 16.62 kcal Atomic # 17 Polarization: -1.28 SS G_CDS: -1.40 Total: -2.69 kcal Total LS contribution 4.32 Total: 4.32 kcal Total: -29.97 -7.69 -37.67 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260194026.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.052 kcal (2) G-P(sol) polarization free energy of solvation -29.973 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.079 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.692 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.665 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.387 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds