Wall clock time and date at job start Mon Mar 30 2020 06:41:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35955 * 116.99722 * 2 1 4 4 C 1.38793 * 120.03684 * 82.81915 * 3 2 1 5 5 F 1.35100 * 120.06739 * 0.04313 * 4 3 2 6 6 C 1.38755 * 119.86710 * 180.02562 * 4 3 2 7 7 O 1.35951 * 120.03449 * 180.02562 * 6 4 3 8 8 C 1.38742 * 119.92898 * 0.02562 * 6 4 3 9 9 C 1.38179 * 120.07099 * 359.97438 * 8 6 4 10 10 C 1.38226 * 120.13426 * 0.28002 * 9 8 6 11 11 C 1.50705 * 119.96337 * 179.70429 * 10 9 8 12 12 C 1.52998 * 109.47148 * 5.49888 * 11 10 9 13 13 C 1.52999 * 109.47283 * 125.49899 * 11 10 9 14 14 C 1.50704 * 109.46650 * 245.50009 * 11 10 9 15 15 H 1.07992 * 120.00254 * 4.16281 * 14 11 10 16 16 C 1.37879 * 119.99783 * 184.16308 * 14 11 10 17 17 N 1.31518 * 119.99867 * 0.02562 * 16 14 11 18 18 Si 1.86798 * 119.99959 * 179.97438 * 16 14 11 19 19 H 1.48502 * 109.47164 * 359.97438 * 18 16 14 20 20 H 1.48498 * 109.47063 * 120.00377 * 18 16 14 21 21 H 1.48506 * 109.46752 * 239.99964 * 18 16 14 22 22 H 1.08999 * 109.47655 * 65.66705 * 1 2 3 23 23 H 1.09004 * 109.47091 * 185.66916 * 1 2 3 24 24 H 1.09007 * 109.47494 * 305.66879 * 1 2 3 25 25 H 0.96699 * 114.00107 * 269.97466 * 7 6 4 26 26 H 1.07996 * 119.97046 * 179.97438 * 8 6 4 27 27 H 1.07995 * 119.93574 * 180.02562 * 9 8 6 28 28 H 1.08998 * 109.47576 * 60.00246 * 12 11 10 29 29 H 1.09002 * 109.47196 * 180.02562 * 12 11 10 30 30 H 1.09011 * 109.46994 * 299.99889 * 12 11 10 31 31 H 1.08997 * 109.46812 * 67.67258 * 13 11 10 32 32 H 1.08997 * 109.47240 * 187.67608 * 13 11 10 33 33 H 1.09001 * 109.46916 * 307.67837 * 13 11 10 34 34 H 0.96997 * 119.99669 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2114 0.0000 4 6 2.2277 1.8986 1.1921 5 9 1.7923 1.3647 2.3543 6 6 2.8575 3.1350 1.1880 7 8 3.0376 3.8108 2.3538 8 6 3.3033 3.6807 -0.0072 9 6 3.1212 2.9942 -1.1924 10 6 2.4894 1.7647 -1.1922 11 6 2.2868 1.0223 -2.4879 12 6 2.9865 1.7747 -3.6216 13 6 2.8779 -0.3837 -2.3680 14 6 0.8126 0.9239 -2.7851 15 1 0.0978 1.4130 -2.1401 16 6 0.3765 0.2092 -3.8806 17 7 1.2469 -0.3870 -4.6658 18 14 -1.4508 0.0865 -4.2486 19 1 -2.2144 0.8384 -3.2206 20 1 -1.7254 0.6623 -5.5896 21 1 -1.8652 -1.3394 -4.2280 22 1 -0.3634 0.4234 -0.9363 23 1 -0.3633 -1.0227 0.1015 24 1 -0.3634 0.5993 0.8349 25 1 2.3087 4.4042 2.5810 26 1 3.7933 4.6431 -0.0112 27 1 3.4694 3.4208 -2.1214 28 1 4.0527 1.8460 -3.4066 29 1 2.8395 1.2380 -4.5588 30 1 2.5652 2.7765 -3.7071 31 1 2.2917 -0.9648 -1.6561 32 1 2.8546 -0.8720 -3.3422 33 1 3.9087 -0.3160 -2.0200 34 1 0.9401 -0.8901 -5.4363 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260304542.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:41:54 Heat of formation + Delta-G solvation = -95.672418 kcal Electronic energy + Delta-G solvation = -19847.999850 eV Core-core repulsion = 16661.506155 eV Total energy + Delta-G solvation = -3186.493695 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 254.110 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -48.43372 -39.69037 -37.87703 -36.17851 -34.62397 -31.41889 -29.66074 -27.98186 -26.40519 -25.85338 -25.03640 -22.50626 -21.78197 -19.33217 -18.43627 -16.97754 -16.63499 -16.17017 -15.81249 -15.43097 -14.86412 -14.44007 -14.29551 -13.77195 -13.71113 -13.10020 -12.81954 -12.38676 -12.00484 -11.54239 -11.33193 -11.30125 -11.10598 -10.93895 -10.68921 -10.54555 -10.35253 -10.29952 -9.80203 -9.46558 -8.92936 -8.88076 -8.42090 -8.15394 -7.81921 -6.05136 -4.14375 1.50739 1.57065 3.20949 3.30516 3.30941 3.73828 4.24274 4.34042 4.60969 4.71402 5.20042 5.31548 5.48726 5.74165 5.87017 6.04335 6.11454 6.35367 6.41754 6.51342 6.57537 6.69458 6.71757 6.92007 7.00535 7.09098 7.22210 7.41867 7.63031 7.67489 7.75909 8.03566 8.12047 8.18939 8.35273 8.80917 9.47915 10.95994 Molecular weight = 254.11amu Principal moments of inertia in cm(-1) A = 0.026564 B = 0.008350 C = 0.007344 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1053.806706 B = 3352.364299 C = 3811.901259 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.310 6.310 3 C 0.085 3.915 4 C 0.042 3.958 5 F -0.137 7.137 6 C 0.049 3.951 7 O -0.491 6.491 8 C -0.126 4.126 9 C -0.117 4.117 10 C -0.024 4.024 11 C 0.101 3.899 12 C -0.132 4.132 13 C -0.128 4.128 14 C -0.498 4.498 15 H 0.058 0.942 16 C 0.070 3.930 17 N -0.880 5.880 18 Si 0.885 3.115 19 H -0.274 1.274 20 H -0.284 1.284 21 H -0.283 1.283 22 H 0.084 0.916 23 H 0.083 0.917 24 H 0.025 0.975 25 H 0.382 0.618 26 H 0.131 0.869 27 H 0.139 0.861 28 H 0.015 0.985 29 H 0.081 0.919 30 H 0.030 0.970 31 H 0.051 0.949 32 H 0.086 0.914 33 H 0.002 0.998 34 H 0.260 0.740 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.503 5.766 6.624 8.796 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.226 6.226 3 C 0.040 3.960 4 C 0.022 3.978 5 F -0.116 7.116 6 C 0.003 3.997 7 O -0.299 6.299 8 C -0.145 4.145 9 C -0.135 4.135 10 C -0.024 4.024 11 C 0.101 3.899 12 C -0.190 4.190 13 C -0.185 4.185 14 C -0.536 4.536 15 H 0.076 0.924 16 C -0.132 4.132 17 N -0.518 5.518 18 Si 0.713 3.287 19 H -0.198 1.198 20 H -0.210 1.210 21 H -0.209 1.209 22 H 0.102 0.898 23 H 0.101 0.899 24 H 0.044 0.956 25 H 0.236 0.764 26 H 0.148 0.852 27 H 0.157 0.843 28 H 0.034 0.966 29 H 0.100 0.900 30 H 0.049 0.951 31 H 0.070 0.930 32 H 0.104 0.896 33 H 0.021 0.979 34 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges 1.099 5.126 6.522 8.368 hybrid contribution -1.694 0.300 0.135 1.725 sum -0.595 5.427 6.657 8.609 Atomic orbital electron populations 1.23309 0.79204 1.02368 1.02053 1.86033 1.19868 1.22945 1.93764 1.18443 0.99761 0.87799 0.90032 1.18666 1.02662 0.94488 0.81974 1.91418 1.87814 1.85988 1.46363 1.18125 1.03500 0.91577 0.86467 1.84872 1.46904 1.60268 1.37893 1.21243 1.01464 1.00768 0.91021 1.21170 0.99577 0.94916 0.97832 1.21049 0.92049 0.93096 0.96243 1.17233 0.96046 0.91524 0.85122 1.21907 0.95519 0.99043 1.02519 1.21894 0.95349 0.97915 1.03384 1.20965 0.89999 1.32332 1.10307 0.92362 1.24850 0.97198 0.95213 0.95971 1.69843 1.32823 1.33464 1.15660 0.86652 0.85736 0.77909 0.78405 1.19830 1.20960 1.20891 0.89755 0.89895 0.95592 0.76358 0.85153 0.84297 0.96618 0.90041 0.95051 0.92958 0.89579 0.97932 0.92966 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.46 10.71 101.05 1.08 1.55 16 2 O -0.31 -6.71 7.27 -19.60 -0.14 -6.86 16 3 C 0.08 1.78 5.36 -39.20 -0.21 1.57 16 4 C 0.04 0.82 7.32 -39.19 -0.29 0.53 16 5 F -0.14 -2.67 16.95 2.25 0.04 -2.63 16 6 C 0.05 0.83 6.71 -39.20 -0.26 0.57 16 7 O -0.49 -7.24 13.37 -19.59 -0.26 -7.50 16 8 C -0.13 -2.01 9.98 -39.42 -0.39 -2.41 16 9 C -0.12 -2.10 8.98 -39.61 -0.36 -2.45 16 10 C -0.02 -0.50 4.70 -104.45 -0.49 -0.99 16 11 C 0.10 2.33 0.48 -156.81 -0.08 2.26 16 12 C -0.13 -2.91 6.96 37.16 0.26 -2.65 16 13 C -0.13 -3.06 7.62 37.16 0.28 -2.78 16 14 C -0.50 -12.27 5.85 -34.44 -0.20 -12.47 16 15 H 0.06 1.44 5.77 -52.49 -0.30 1.14 16 16 C 0.07 1.75 5.15 -17.82 -0.09 1.66 16 17 N -0.88 -22.88 9.47 55.43 0.52 -22.36 16 18 Si 0.89 19.77 29.54 -169.99 -5.02 14.75 16 19 H -0.27 -6.00 7.11 56.52 0.40 -5.60 16 20 H -0.28 -6.39 7.11 56.52 0.40 -5.99 16 21 H -0.28 -6.37 7.11 56.52 0.40 -5.97 16 22 H 0.08 1.74 4.56 -51.93 -0.24 1.51 16 23 H 0.08 1.39 8.14 -51.93 -0.42 0.97 16 24 H 0.03 0.44 8.14 -51.92 -0.42 0.02 16 25 H 0.38 3.70 9.06 45.56 0.41 4.11 16 26 H 0.13 1.67 8.06 -52.49 -0.42 1.25 16 27 H 0.14 2.30 5.90 -52.49 -0.31 1.99 16 28 H 0.01 0.30 7.77 -51.93 -0.40 -0.10 16 29 H 0.08 1.97 6.41 -51.93 -0.33 1.64 16 30 H 0.03 0.64 7.25 -51.92 -0.38 0.27 16 31 H 0.05 1.28 5.98 -51.93 -0.31 0.97 16 32 H 0.09 2.20 6.04 -51.93 -0.31 1.89 16 33 H 0.00 0.04 8.13 -51.93 -0.42 -0.39 16 34 H 0.26 6.54 8.31 -40.82 -0.34 6.20 16 LS Contribution 277.27 15.07 4.18 4.18 Total: -1.00 -27.71 277.27 -4.43 -32.14 By element: Atomic # 1 Polarization: 6.90 SS G_CDS: -3.00 Total: 3.90 kcal Atomic # 6 Polarization: -14.88 SS G_CDS: -0.74 Total: -15.62 kcal Atomic # 7 Polarization: -22.88 SS G_CDS: 0.52 Total: -22.36 kcal Atomic # 8 Polarization: -13.95 SS G_CDS: -0.40 Total: -14.36 kcal Atomic # 9 Polarization: -2.67 SS G_CDS: 0.04 Total: -2.63 kcal Atomic # 14 Polarization: 19.77 SS G_CDS: -5.02 Total: 14.75 kcal Total LS contribution 4.18 Total: 4.18 kcal Total: -27.71 -4.43 -32.14 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260304542.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.533 kcal (2) G-P(sol) polarization free energy of solvation -27.712 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.245 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.427 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.139 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.672 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds