Wall clock time and date at job start Mon Mar 30 2020 06:41:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.36044 * 117.00124 * 2 1 4 4 C 1.38543 * 120.04395 * 0.02562 * 3 2 1 5 5 C 1.38255 * 120.01852 * 179.97438 * 4 3 2 6 6 C 1.50697 * 119.93727 * 180.02562 * 5 4 3 7 7 C 1.53004 * 109.47376 * 240.00053 * 6 5 4 8 8 C 1.53004 * 109.47471 * 359.97438 * 6 5 4 9 9 C 1.50698 * 109.47048 * 120.00046 * 6 5 4 10 10 H 1.07997 * 119.99977 * 359.97438 * 9 6 5 11 11 C 1.37880 * 120.00195 * 180.02562 * 9 6 5 12 12 N 1.31519 * 119.99423 * 359.97438 * 11 9 6 13 13 Si 1.86799 * 120.00391 * 179.97438 * 11 9 6 14 14 H 1.48505 * 109.46746 * 359.97438 * 13 11 9 15 15 H 1.48499 * 109.47303 * 119.99583 * 13 11 9 16 16 H 1.48498 * 109.47190 * 239.99957 * 13 11 9 17 17 C 1.38449 * 120.12306 * 359.97438 * 5 4 3 18 18 F 1.35100 * 119.95056 * 180.02562 * 17 5 4 19 19 C 1.38425 * 120.09426 * 0.02562 * 17 5 4 20 20 C 1.38569 * 119.97470 * 359.97438 * 19 17 5 21 21 O 1.35996 * 120.05555 * 180.02562 * 20 19 17 22 22 H 1.09002 * 109.46604 * 299.99409 * 1 2 3 23 23 H 1.08990 * 109.47371 * 59.99316 * 1 2 3 24 24 H 1.09002 * 109.47150 * 180.02562 * 1 2 3 25 25 H 1.07994 * 119.99137 * 0.24569 * 4 3 2 26 26 H 1.09000 * 109.46667 * 59.99904 * 7 6 5 27 27 H 1.08997 * 109.47244 * 180.02562 * 7 6 5 28 28 H 1.09001 * 109.46590 * 300.00304 * 7 6 5 29 29 H 1.09004 * 109.47182 * 59.99501 * 8 6 5 30 30 H 1.08997 * 109.47358 * 179.97438 * 8 6 5 31 31 H 1.09000 * 109.47170 * 300.00463 * 8 6 5 32 32 H 0.97006 * 119.99478 * 180.02562 * 12 11 9 33 33 H 1.08000 * 120.00899 * 179.97438 * 19 17 5 34 34 H 0.96703 * 113.99285 * 90.00586 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0466 1.2121 0.0000 4 6 1.2930 2.3747 0.0005 5 6 1.9212 3.6062 0.0011 6 6 1.0997 4.8696 0.0022 7 6 1.4257 5.6912 -1.2466 8 6 -0.3877 4.5108 0.0020 9 6 1.4219 5.6772 1.2331 10 1 2.1486 5.3119 1.9436 11 6 0.7883 6.8819 1.4526 12 7 -0.0971 7.3264 0.5875 13 14 1.1871 7.8826 2.9787 14 1 2.2080 7.1680 3.7863 15 1 1.7150 9.2108 2.5756 16 1 -0.0449 8.0643 3.7875 17 6 3.3037 3.6810 0.0016 18 9 3.9140 4.8863 0.0027 19 6 4.0615 2.5226 0.0011 20 6 3.4360 1.2861 0.0005 21 8 4.1788 0.1470 0.0005 22 1 -0.3632 0.5138 0.8901 23 1 -0.3633 0.5139 -0.8898 24 1 -0.3633 -1.0277 0.0005 25 1 0.2145 2.3188 0.0050 26 1 1.1926 5.1070 -2.1368 27 1 0.8318 6.6051 -1.2455 28 1 2.4854 5.9468 -1.2469 29 1 -0.6204 3.9252 0.8914 30 1 -0.9819 5.4245 0.0033 31 1 -0.6204 3.9268 -0.8885 32 1 -0.5426 8.1741 0.7418 33 1 5.1398 2.5825 0.0011 34 1 4.3932 -0.1826 0.8840 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260458479.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:41:48 Heat of formation + Delta-G solvation = -101.878673 kcal Electronic energy + Delta-G solvation = -19484.853158 eV Core-core repulsion = 16298.090340 eV Total energy + Delta-G solvation = -3186.762819 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 254.110 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -47.96657 -40.02641 -37.50839 -36.97878 -34.48557 -31.47144 -29.49596 -28.41157 -26.88990 -25.75655 -25.18843 -22.57605 -21.60742 -19.39752 -18.39955 -17.17556 -16.60289 -16.08159 -15.91901 -15.36864 -14.77393 -14.64173 -14.29023 -13.81235 -13.59441 -13.33166 -12.91446 -12.58097 -11.90972 -11.69801 -11.49297 -11.38122 -11.07568 -10.98983 -10.73677 -10.61984 -10.45923 -10.30221 -10.15992 -9.66027 -9.48029 -8.96515 -8.39846 -8.27274 -7.41814 -6.02466 -4.11802 1.59280 1.72041 3.26819 3.35290 3.40170 3.46847 3.94829 4.39244 4.43003 5.10836 5.15630 5.24161 5.26986 5.31820 5.54686 5.58463 5.73826 5.95067 6.12216 6.48801 6.56875 6.61523 6.66564 6.88230 6.92377 7.05690 7.23422 7.28344 7.46431 7.53270 7.69761 7.97233 7.98229 8.09975 8.34721 8.86290 9.52879 10.99022 Molecular weight = 254.11amu Principal moments of inertia in cm(-1) A = 0.025475 B = 0.007495 C = 0.006682 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1098.851615 B = 3734.729758 C = 4189.375556 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.313 6.313 3 C 0.087 3.913 4 C -0.179 4.179 5 C -0.030 4.030 6 C 0.097 3.903 7 C -0.134 4.134 8 C -0.133 4.133 9 C -0.495 4.495 10 H 0.056 0.944 11 C 0.066 3.934 12 N -0.887 5.887 13 Si 0.893 3.107 14 H -0.273 1.273 15 H -0.283 1.283 16 H -0.285 1.285 17 C 0.087 3.913 18 F -0.125 7.125 19 C -0.152 4.152 20 C 0.069 3.931 21 O -0.486 6.486 22 H 0.056 0.944 23 H 0.055 0.945 24 H 0.095 0.905 25 H 0.143 0.857 26 H 0.008 0.992 27 H 0.090 0.910 28 H 0.038 0.962 29 H 0.029 0.971 30 H 0.090 0.910 31 H 0.012 0.988 32 H 0.260 0.740 33 H 0.138 0.862 34 H 0.379 0.621 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.887 -10.573 -0.522 10.753 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.227 6.227 3 C 0.041 3.959 4 C -0.197 4.197 5 C -0.031 4.031 6 C 0.096 3.904 7 C -0.191 4.191 8 C -0.190 4.190 9 C -0.533 4.533 10 H 0.075 0.925 11 C -0.135 4.135 12 N -0.526 5.526 13 Si 0.721 3.279 14 H -0.198 1.198 15 H -0.209 1.209 16 H -0.211 1.211 17 C 0.067 3.933 18 F -0.103 7.103 19 C -0.171 4.171 20 C 0.024 3.976 21 O -0.294 6.294 22 H 0.074 0.926 23 H 0.074 0.926 24 H 0.114 0.886 25 H 0.161 0.839 26 H 0.028 0.972 27 H 0.108 0.892 28 H 0.057 0.943 29 H 0.048 0.952 30 H 0.109 0.891 31 H 0.031 0.969 32 H 0.070 0.930 33 H 0.156 0.844 34 H 0.234 0.766 Dipole moment (debyes) X Y Z Total from point charges 1.835 -10.502 -1.164 10.724 hybrid contribution 0.127 0.820 1.377 1.608 sum 1.962 -9.682 0.214 9.881 Atomic orbital electron populations 1.23040 0.78873 1.03351 1.01717 1.86076 1.20924 1.26478 1.89188 1.19399 0.91467 0.84839 1.00181 1.21171 1.00806 0.90410 1.07339 1.20689 0.92417 0.97299 0.92664 1.17275 0.90611 0.86724 0.95749 1.21874 1.01057 1.01925 0.94289 1.21904 0.99140 1.01646 0.96348 1.20977 1.23195 1.03877 1.05244 0.92549 1.24865 0.94860 0.97216 0.96536 1.69813 1.26885 1.20686 1.35174 0.86507 0.78164 0.80142 0.83077 1.19788 1.20940 1.21078 1.17204 0.90436 0.80230 1.05390 1.91488 1.82823 1.42268 1.93740 1.21069 1.00567 0.90434 1.05043 1.17123 0.85896 0.85672 1.08892 1.84883 1.72096 1.39620 1.32849 0.92561 0.92633 0.88622 0.83927 0.97247 0.89164 0.94307 0.95237 0.89145 0.96914 0.92989 0.84438 0.76649 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.30 9.81 101.05 0.99 1.30 16 2 O -0.31 -4.95 10.28 -34.42 -0.35 -5.30 16 3 C 0.09 1.53 6.70 -39.14 -0.26 1.26 16 4 C -0.18 -3.38 7.96 -39.46 -0.31 -3.69 16 5 C -0.03 -0.64 4.72 -104.54 -0.49 -1.13 16 6 C 0.10 2.31 0.49 -156.81 -0.08 2.24 16 7 C -0.13 -3.22 8.04 37.16 0.30 -2.92 16 8 C -0.13 -3.01 6.91 37.16 0.26 -2.75 16 9 C -0.49 -13.09 7.03 -34.44 -0.24 -13.34 16 10 H 0.06 1.54 7.60 -52.49 -0.40 1.14 16 11 C 0.07 1.75 5.15 -17.82 -0.09 1.66 16 12 N -0.89 -23.78 9.35 55.43 0.52 -23.27 16 13 Si 0.89 20.95 29.54 -169.99 -5.02 15.93 16 14 H -0.27 -6.43 7.11 56.52 0.40 -6.03 16 15 H -0.28 -6.65 7.11 56.52 0.40 -6.25 16 16 H -0.28 -6.62 7.11 56.52 0.40 -6.21 16 17 C 0.09 1.81 6.68 -39.43 -0.26 1.55 16 18 F -0.12 -2.79 14.36 2.25 0.03 -2.76 16 19 C -0.15 -2.69 9.96 -39.39 -0.39 -3.09 16 20 C 0.07 1.19 6.72 -39.13 -0.26 0.93 16 21 O -0.49 -7.27 13.29 -34.27 -0.46 -7.73 16 22 H 0.06 0.65 7.66 -51.93 -0.40 0.25 16 23 H 0.06 0.64 7.67 -51.93 -0.40 0.24 16 24 H 0.10 0.86 8.14 -51.93 -0.42 0.43 16 25 H 0.14 2.50 4.12 -52.49 -0.22 2.28 16 26 H 0.01 0.19 8.14 -51.93 -0.42 -0.23 16 27 H 0.09 2.34 6.07 -51.93 -0.32 2.02 16 28 H 0.04 0.93 6.30 -51.93 -0.33 0.60 16 29 H 0.03 0.63 7.51 -51.93 -0.39 0.24 16 30 H 0.09 2.25 6.07 -51.93 -0.32 1.94 16 31 H 0.01 0.25 7.51 -51.93 -0.39 -0.14 16 32 H 0.26 6.70 8.31 -40.82 -0.34 6.36 16 33 H 0.14 2.10 8.06 -52.49 -0.42 1.68 16 34 H 0.38 3.84 9.06 45.56 0.41 4.26 16 LS Contribution 280.53 15.07 4.23 4.23 Total: -1.00 -29.25 280.53 -5.04 -34.30 By element: Atomic # 1 Polarization: 5.72 SS G_CDS: -3.14 Total: 2.58 kcal Atomic # 6 Polarization: -17.13 SS G_CDS: -0.85 Total: -17.98 kcal Atomic # 7 Polarization: -23.78 SS G_CDS: 0.52 Total: -23.27 kcal Atomic # 8 Polarization: -12.22 SS G_CDS: -0.81 Total: -13.03 kcal Atomic # 9 Polarization: -2.79 SS G_CDS: 0.03 Total: -2.76 kcal Atomic # 14 Polarization: 20.95 SS G_CDS: -5.02 Total: 15.93 kcal Total LS contribution 4.23 Total: 4.23 kcal Total: -29.25 -5.04 -34.30 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260458479.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.583 kcal (2) G-P(sol) polarization free energy of solvation -29.254 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.837 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.042 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.296 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.879 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds