Wall clock time and date at job start Mon Mar 30 2020 05:58:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 N 1.30812 * 125.70417 * 2 1 4 4 C 1.34464 * 109.33651 * 179.81404 * 3 2 1 5 5 Cl 1.73600 * 126.10945 * 180.13094 * 4 3 2 6 6 C 1.33939 * 107.78002 * 0.38667 * 4 3 2 7 7 N 1.34375 * 125.71483 * 180.30242 * 2 1 3 8 8 C 1.46469 * 128.46519 * 0.16120 * 7 2 1 9 9 H 1.09003 * 109.59981 * 282.57764 * 8 7 2 10 10 C 1.52998 * 109.60089 * 42.89651 * 8 7 2 11 11 C 1.50707 * 109.47269 * 182.43475 * 10 8 7 12 12 H 1.08000 * 119.99266 * 0.02562 * 11 10 8 13 13 C 1.37871 * 120.00411 * 179.97438 * 11 10 8 14 14 N 1.31516 * 120.00480 * 180.02562 * 13 11 10 15 15 Si 1.86801 * 119.99968 * 0.02562 * 13 11 10 16 16 H 1.48501 * 109.47093 * 89.99847 * 15 13 11 17 17 H 1.48496 * 109.47301 * 209.99698 * 15 13 11 18 18 H 1.48501 * 109.47036 * 330.00093 * 15 13 11 19 19 C 1.53281 * 108.68820 * 162.65592 * 8 7 2 20 20 C 1.53117 * 109.70815 * 50.79184 * 19 8 7 21 21 C 1.50702 * 128.71248 * 179.90491 * 6 4 3 22 22 H 1.09000 * 109.46858 * 238.09373 * 1 2 3 23 23 H 1.08999 * 109.46631 * 118.10274 * 1 2 3 24 24 H 1.09003 * 109.47554 * 358.10249 * 1 2 3 25 25 H 1.09003 * 109.47671 * 302.43324 * 10 8 7 26 26 H 1.09003 * 109.47492 * 62.43542 * 10 8 7 27 27 H 0.96991 * 120.00078 * 179.97438 * 14 13 11 28 28 H 1.08998 * 109.43410 * 170.86466 * 19 8 7 29 29 H 1.09000 * 109.43348 * 290.77342 * 19 8 7 30 30 H 1.09001 * 109.49871 * 50.00311 * 20 19 8 31 31 H 1.09002 * 109.50070 * 170.09522 * 20 19 8 32 32 H 1.09004 * 109.74789 * 44.58338 * 21 6 4 33 33 H 1.09008 * 109.78429 * 283.89241 * 21 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2704 1.0622 0.0000 4 6 3.5606 0.6833 0.0041 5 17 4.9374 1.7407 0.0089 6 6 3.5936 -0.6556 -0.0019 7 7 2.2914 -1.0910 -0.0058 8 6 1.8921 -2.5002 -0.0164 9 1 1.5750 -2.7980 0.9830 10 6 0.7386 -2.6993 -1.0015 11 6 0.2905 -4.1378 -0.9663 12 1 0.7794 -4.8396 -0.3068 13 6 -0.7442 -4.5577 -1.7750 14 7 -1.1355 -5.8129 -1.7439 15 14 -1.5902 -3.3436 -2.9151 16 1 -0.8976 -3.3328 -4.2287 17 1 -3.0064 -3.7478 -3.1056 18 1 -1.5392 -1.9852 -2.3174 19 6 3.0927 -3.3476 -0.4524 20 6 4.3187 -2.9761 0.3863 21 6 4.7924 -1.5689 -0.0026 22 1 -0.3633 -0.5432 0.8724 23 1 -0.3632 -0.4841 -0.9065 24 1 -0.3634 1.0271 0.0340 25 1 -0.0934 -2.0528 -0.7224 26 1 1.0726 -2.4475 -2.0081 27 1 -1.8636 -6.1081 -2.3126 28 1 2.8623 -4.4033 -0.3099 29 1 3.3047 -3.1615 -1.5053 30 1 4.0545 -2.9918 1.4437 31 1 5.1180 -3.6935 0.1999 32 1 5.5261 -1.2141 0.7213 33 1 5.2380 -1.5920 -0.9971 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260948747.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:58:52 Heat of formation + Delta-G solvation = 34.770213 kcal Electronic energy + Delta-G solvation = -17088.616343 eV Core-core repulsion = 14368.408191 eV Total energy + Delta-G solvation = -2720.208152 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 254.088 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -42.20313 -36.90103 -36.26435 -34.14076 -32.51329 -30.95894 -30.06139 -28.42328 -25.47149 -24.03048 -21.94933 -21.23620 -20.15226 -18.74009 -17.20879 -16.19866 -15.52574 -14.51459 -14.46417 -14.37668 -13.95166 -13.82649 -13.22532 -12.97979 -12.92812 -12.35711 -12.32853 -12.01684 -11.61469 -11.21270 -11.14214 -10.91894 -10.82311 -10.71866 -10.51383 -10.16466 -9.94093 -9.72556 -9.36487 -9.05484 -8.73826 -7.88260 -6.25909 -4.27289 2.18200 2.22458 3.14198 3.16601 3.23372 3.24832 3.26438 4.25345 4.71895 4.84671 4.94249 4.97865 5.10570 5.18114 5.36569 5.60342 5.61232 5.80491 5.82370 5.89503 5.96219 6.01348 6.09429 6.21343 6.33482 6.54631 6.61815 6.66193 6.85119 6.98170 7.35134 7.58626 8.18487 8.24488 8.74118 9.33879 10.86240 Molecular weight = 254.09amu Principal moments of inertia in cm(-1) A = 0.029283 B = 0.006885 C = 0.005932 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 955.945948 B = 4065.833936 C = 4718.636287 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 C 0.233 3.767 3 N -0.496 5.496 4 C 0.046 3.954 5 Cl -0.029 7.029 6 C -0.002 4.002 7 N -0.432 5.432 8 C 0.142 3.858 9 H 0.090 0.910 10 C -0.029 4.029 11 C -0.524 4.524 12 H 0.078 0.922 13 C 0.075 3.925 14 N -0.894 5.894 15 Si 0.875 3.125 16 H -0.276 1.276 17 H -0.284 1.284 18 H -0.264 1.264 19 C -0.118 4.118 20 C -0.127 4.127 21 C -0.044 4.044 22 H 0.081 0.919 23 H 0.091 0.909 24 H 0.085 0.915 25 H 0.040 0.960 26 H 0.020 0.980 27 H 0.267 0.733 28 H 0.098 0.902 29 H 0.070 0.930 30 H 0.064 0.936 31 H 0.074 0.926 32 H 0.083 0.917 33 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.787 8.178 3.570 12.524 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.029 4.029 3 N -0.218 5.218 4 C -0.109 4.109 5 Cl -0.001 7.001 6 C -0.120 4.120 7 N -0.114 5.114 8 C 0.042 3.958 9 H 0.108 0.892 10 C -0.066 4.066 11 C -0.562 4.562 12 H 0.096 0.904 13 C -0.128 4.128 14 N -0.531 5.531 15 Si 0.702 3.298 16 H -0.202 1.202 17 H -0.210 1.210 18 H -0.189 1.189 19 C -0.155 4.155 20 C -0.164 4.164 21 C -0.082 4.082 22 H 0.100 0.900 23 H 0.110 0.890 24 H 0.104 0.896 25 H 0.058 0.942 26 H 0.038 0.962 27 H 0.076 0.924 28 H 0.116 0.884 29 H 0.088 0.912 30 H 0.083 0.917 31 H 0.093 0.907 32 H 0.102 0.898 33 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 8.411 8.776 3.494 12.647 hybrid contribution -0.101 -0.118 -0.708 0.725 sum 8.309 8.658 2.786 12.319 Atomic orbital electron populations 1.20513 0.84592 1.04097 1.04222 1.22869 0.95594 0.80455 1.04033 1.70067 1.00036 1.28949 1.22737 1.19993 0.88884 0.87469 1.14601 1.98301 1.37547 1.66592 1.97646 1.20597 0.87025 0.93070 1.11339 1.45812 1.04960 1.08871 1.51717 1.21899 0.97286 0.74411 1.02234 0.89187 1.20196 0.92833 0.99730 0.93846 1.20809 1.18111 0.92206 1.25109 0.90403 1.24922 0.96356 0.95017 0.96475 1.69873 1.28416 1.15338 1.39496 0.86870 0.79202 0.82049 0.81691 1.20172 1.21023 1.18878 1.21848 0.92159 1.01400 1.00126 1.21744 0.98590 0.95696 1.00420 1.20235 0.92452 0.92856 1.02697 0.90039 0.89028 0.89576 0.94179 0.96159 0.92355 0.88384 0.91159 0.91691 0.90746 0.89828 0.90008 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -1.19 8.76 36.01 0.32 -0.87 16 2 C 0.23 4.25 7.69 -155.76 -1.20 3.05 16 3 N -0.50 -9.47 11.27 -8.18 -0.09 -9.56 16 4 C 0.05 0.81 7.70 -17.91 -0.14 0.67 16 5 Cl -0.03 -0.43 29.19 -51.86 -1.51 -1.94 16 6 C 0.00 -0.04 6.58 -81.65 -0.54 -0.57 16 7 N -0.43 -7.73 2.98 -102.36 -0.31 -8.04 16 8 C 0.14 2.57 3.00 -67.80 -0.20 2.37 16 9 H 0.09 1.61 8.14 -51.93 -0.42 1.19 16 10 C -0.03 -0.60 3.19 -27.88 -0.09 -0.69 16 11 C -0.52 -13.18 9.06 -34.44 -0.31 -13.49 16 12 H 0.08 2.08 7.22 -52.49 -0.38 1.70 16 13 C 0.08 2.00 5.47 -17.82 -0.10 1.91 16 14 N -0.89 -25.51 13.96 55.43 0.77 -24.73 16 15 Si 0.87 20.10 27.47 -169.99 -4.67 15.43 16 16 H -0.28 -6.38 7.11 56.52 0.40 -5.98 16 17 H -0.28 -6.54 7.11 56.52 0.40 -6.14 16 18 H -0.26 -5.68 6.44 56.52 0.36 -5.32 16 19 C -0.12 -1.90 4.84 -26.53 -0.13 -2.03 16 20 C -0.13 -1.64 5.95 -26.42 -0.16 -1.80 16 21 C -0.04 -0.58 6.19 -27.63 -0.17 -0.75 16 22 H 0.08 1.17 8.14 -51.93 -0.42 0.74 16 23 H 0.09 1.52 6.04 -51.93 -0.31 1.21 16 24 H 0.09 1.18 8.14 -51.93 -0.42 0.75 16 25 H 0.04 0.83 3.54 -51.93 -0.18 0.65 16 26 H 0.02 0.45 7.57 -51.93 -0.39 0.06 16 27 H 0.27 7.17 8.31 -40.82 -0.34 6.83 16 28 H 0.10 1.66 7.16 -51.93 -0.37 1.29 16 29 H 0.07 1.19 8.09 -51.93 -0.42 0.77 16 30 H 0.06 0.84 8.12 -51.93 -0.42 0.41 16 31 H 0.07 0.81 8.14 -51.93 -0.42 0.39 16 32 H 0.08 0.96 8.14 -51.93 -0.42 0.54 16 33 H 0.08 1.01 8.14 -51.92 -0.42 0.59 16 LS Contribution 278.85 15.07 4.20 4.20 Total: -1.00 -28.68 278.85 -8.51 -37.19 By element: Atomic # 1 Polarization: 3.87 SS G_CDS: -4.19 Total: -0.32 kcal Atomic # 6 Polarization: -9.51 SS G_CDS: -2.72 Total: -12.23 kcal Atomic # 7 Polarization: -42.71 SS G_CDS: 0.38 Total: -42.33 kcal Atomic # 14 Polarization: 20.10 SS G_CDS: -4.67 Total: 15.43 kcal Atomic # 17 Polarization: -0.43 SS G_CDS: -1.51 Total: -1.94 kcal Total LS contribution 4.20 Total: 4.20 kcal Total: -28.68 -8.51 -37.19 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260948747.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.958 kcal (2) G-P(sol) polarization free energy of solvation -28.675 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 43.283 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.512 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.188 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.770 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds