Wall clock time and date at job start Mon Mar 30 2020 06:42:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35936 * 116.99944 * 2 1 4 4 C 1.38505 * 120.08861 * 0.02562 * 3 2 1 5 5 C 1.38373 * 120.01937 * 179.97438 * 4 3 2 6 6 Cl 1.73601 * 119.89834 * 179.97438 * 5 4 3 7 7 C 1.38463 * 120.20068 * 0.02562 * 5 4 3 8 8 C 1.50706 * 119.90758 * 179.97438 * 7 5 4 9 9 C 1.38095 * 120.17991 * 0.02562 * 7 5 4 10 10 C 1.38966 * 119.97346 * 359.69629 * 9 7 5 11 11 N 1.39437 * 120.10051 * 180.29701 * 10 9 7 12 12 C 1.46500 * 119.99886 * 90.27598 * 11 10 9 13 13 C 1.36803 * 120.00135 * 270.28394 * 11 10 9 14 14 H 1.08004 * 119.99611 * 325.38145 * 13 11 10 15 15 C 1.38751 * 120.00388 * 145.39197 * 13 11 10 16 16 N 1.31621 * 120.00415 * 157.39334 * 15 13 11 17 17 Si 1.86803 * 119.99852 * 337.39314 * 15 13 11 18 18 H 1.48498 * 109.47143 * 95.40040 * 17 15 13 19 19 H 1.48497 * 109.47302 * 215.40150 * 17 15 13 20 20 H 1.48500 * 109.46962 * 335.39956 * 17 15 13 21 21 H 1.09004 * 109.47139 * 179.97438 * 1 2 3 22 22 H 1.08993 * 109.47433 * 59.99602 * 1 2 3 23 23 H 1.08999 * 109.46834 * 299.99484 * 1 2 3 24 24 H 1.07998 * 119.99200 * 359.97438 * 4 3 2 25 25 H 1.08994 * 109.47183 * 90.00117 * 8 7 5 26 26 H 1.09001 * 109.46816 * 210.00065 * 8 7 5 27 27 H 1.08998 * 109.47554 * 329.99711 * 8 7 5 28 28 H 1.07997 * 120.01518 * 180.02562 * 9 7 5 29 29 H 1.08997 * 109.46863 * 90.60558 * 12 11 10 30 30 H 1.08996 * 109.47483 * 210.61096 * 12 11 10 31 31 H 1.09000 * 109.47262 * 330.61228 * 12 11 10 32 32 H 0.97000 * 120.00303 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2112 0.0000 4 6 1.2935 2.3740 0.0005 5 6 1.9232 3.6061 0.0011 6 17 0.9769 5.0615 0.0011 7 6 3.3058 3.6818 0.0005 8 6 3.9847 5.0272 0.0005 9 6 4.0642 2.5277 -0.0011 10 6 3.4395 1.2864 0.0042 11 7 4.2027 0.1195 0.0089 12 6 4.5988 -0.4916 1.2801 13 6 4.5817 -0.4547 -1.1736 14 1 3.9232 -0.4148 -2.0287 15 6 5.8120 -1.0884 -1.2742 16 7 6.0091 -1.9991 -2.2039 17 14 7.1885 -0.6492 -0.0903 18 1 7.1937 -1.6106 1.0414 19 1 8.4913 -0.7132 -0.8001 20 1 6.9748 0.7256 0.4290 21 1 -0.3634 -1.0277 -0.0005 22 1 -0.3634 0.5139 -0.8899 23 1 -0.3633 0.5138 0.8900 24 1 0.2150 2.3190 0.0005 25 1 4.1488 5.3514 1.0281 26 1 4.9427 4.9507 -0.5137 27 1 3.3537 5.7527 -0.5129 28 1 5.1424 2.5898 -0.0011 29 1 3.8422 -1.2135 1.5875 30 1 5.5559 -0.9985 1.1570 31 1 4.6930 0.2825 2.0416 32 1 6.8693 -2.4418 -2.2745 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000049819872.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:42:51 Heat of formation + Delta-G solvation = 11.581148 kcal Electronic energy + Delta-G solvation = -17019.653557 eV Core-core repulsion = 14200.721189 eV Total energy + Delta-G solvation = -2818.932367 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -39.83274 -37.46269 -36.42118 -35.33154 -31.93584 -31.41707 -29.42076 -27.50288 -26.08152 -25.57972 -23.77995 -21.48074 -20.16699 -17.78181 -16.93248 -16.17965 -15.67354 -15.32435 -14.76772 -14.52711 -13.81819 -13.72827 -13.67450 -12.87164 -12.64144 -12.34331 -12.20600 -12.14972 -11.77564 -11.53676 -11.50362 -11.30680 -10.80171 -10.59243 -10.57307 -10.18779 -10.02701 -9.63346 -8.63076 -8.30932 -7.48865 -7.10469 -6.05094 -3.47900 1.59896 1.76267 2.38085 3.26782 3.42156 3.45999 3.73605 4.05163 4.45317 4.78457 5.08183 5.18347 5.27266 5.32551 5.39389 5.60102 5.63255 5.72911 5.82757 5.99562 6.05331 6.16733 6.24141 6.39008 6.41112 6.65912 6.72311 6.92600 7.10754 7.79440 7.97550 8.41131 8.93968 9.64191 9.98955 11.09681 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.024128 B = 0.007629 C = 0.006314 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1160.193747 B = 3669.133399 C = 4433.496326 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.287 6.287 3 C 0.117 3.883 4 C -0.200 4.200 5 C -0.019 4.019 6 Cl -0.087 7.087 7 C -0.111 4.111 8 C -0.109 4.109 9 C -0.088 4.088 10 C 0.192 3.808 11 N -0.566 5.566 12 C 0.114 3.886 13 C -0.264 4.264 14 H 0.082 0.918 15 C 0.037 3.963 16 N -0.894 5.894 17 Si 0.885 3.115 18 H -0.285 1.285 19 H -0.301 1.301 20 H -0.270 1.270 21 H 0.096 0.904 22 H 0.050 0.950 23 H 0.048 0.952 24 H 0.130 0.870 25 H 0.066 0.934 26 H 0.066 0.934 27 H 0.067 0.933 28 H 0.134 0.866 29 H 0.025 0.975 30 H 0.048 0.952 31 H 0.033 0.967 32 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.565 10.565 6.404 15.033 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.199 6.199 3 C 0.068 3.932 4 C -0.220 4.220 5 C -0.046 4.046 6 Cl -0.058 7.058 7 C -0.112 4.112 8 C -0.166 4.166 9 C -0.109 4.109 10 C 0.096 3.904 11 N -0.285 5.285 12 C -0.029 4.029 13 C -0.391 4.391 14 H 0.100 0.900 15 C -0.164 4.164 16 N -0.535 5.535 17 Si 0.715 3.285 18 H -0.213 1.213 19 H -0.229 1.229 20 H -0.195 1.195 21 H 0.114 0.886 22 H 0.069 0.931 23 H 0.066 0.934 24 H 0.148 0.852 25 H 0.085 0.915 26 H 0.085 0.915 27 H 0.086 0.914 28 H 0.152 0.848 29 H 0.044 0.956 30 H 0.066 0.934 31 H 0.052 0.948 32 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -8.421 10.312 6.311 14.734 hybrid contribution 0.412 0.339 0.510 0.738 sum -8.009 10.652 6.821 14.971 Atomic orbital electron populations 1.23018 0.80071 1.03490 1.00546 1.86340 1.19629 1.25783 1.88124 1.19884 0.92658 0.83652 0.96959 1.20835 0.99857 0.90569 1.10714 1.20279 0.90720 0.86180 1.07379 1.98306 1.72741 1.37611 1.97144 1.19504 0.91092 0.96229 1.04423 1.20742 1.00429 0.93322 1.02097 1.21504 1.00212 0.90307 0.98878 1.17089 0.87005 0.88410 0.97855 1.41319 1.60924 1.22909 1.03385 1.21440 0.98696 0.96215 0.86572 1.18682 0.99754 1.30892 0.89809 0.89997 1.25347 0.97196 0.97091 0.96732 1.69861 1.24254 1.23711 1.35625 0.86861 0.82025 0.79413 0.80177 1.21308 1.22869 1.19497 0.88603 0.93143 0.93362 0.85215 0.91520 0.91454 0.91429 0.84817 0.95638 0.93401 0.94787 0.92487 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.33 9.81 101.05 0.99 1.32 16 2 O -0.29 -5.60 10.24 -19.54 -0.20 -5.80 16 3 C 0.12 2.30 6.71 -39.00 -0.26 2.03 16 4 C -0.20 -3.30 8.81 -39.43 -0.35 -3.64 16 5 C -0.02 -0.30 6.32 -39.45 -0.25 -0.55 16 6 Cl -0.09 -1.17 27.27 -51.86 -1.41 -2.58 16 7 C -0.11 -1.83 5.88 -104.59 -0.62 -2.44 16 8 C -0.11 -1.44 9.61 36.01 0.35 -1.09 16 9 C -0.09 -1.70 9.62 -39.36 -0.38 -2.08 16 10 C 0.19 4.16 5.06 -83.64 -0.42 3.73 16 11 N -0.57 -13.94 2.30 -120.38 -0.28 -14.22 16 12 C 0.11 2.56 9.55 59.85 0.57 3.13 16 13 C -0.26 -7.52 9.92 -15.14 -0.15 -7.67 16 14 H 0.08 2.55 8.06 -52.48 -0.42 2.13 16 15 C 0.04 1.07 5.32 -17.45 -0.09 0.98 16 16 N -0.89 -27.14 13.97 55.49 0.78 -26.36 16 17 Si 0.88 21.94 24.92 -169.99 -4.24 17.70 16 18 H -0.28 -6.86 6.67 56.52 0.38 -6.48 16 19 H -0.30 -7.54 7.11 56.52 0.40 -7.13 16 20 H -0.27 -6.44 7.11 56.52 0.40 -6.04 16 21 H 0.10 1.11 8.14 -51.93 -0.42 0.69 16 22 H 0.05 0.62 7.66 -51.93 -0.40 0.22 16 23 H 0.05 0.56 7.66 -51.93 -0.40 0.16 16 24 H 0.13 1.82 6.30 -52.49 -0.33 1.49 16 25 H 0.07 0.79 8.14 -51.93 -0.42 0.37 16 26 H 0.07 0.84 8.08 -51.93 -0.42 0.42 16 27 H 0.07 0.83 6.89 -51.93 -0.36 0.47 16 28 H 0.13 2.58 8.06 -52.49 -0.42 2.15 16 29 H 0.03 0.55 8.14 -51.93 -0.42 0.13 16 30 H 0.05 1.13 2.85 -51.93 -0.15 0.98 16 31 H 0.03 0.66 8.04 -51.93 -0.42 0.25 16 32 H 0.27 7.57 8.31 -40.82 -0.34 7.23 16 LS Contribution 282.52 15.07 4.26 4.26 Total: -1.00 -30.80 282.52 -5.45 -36.25 By element: Atomic # 1 Polarization: 0.78 SS G_CDS: -3.74 Total: -2.96 kcal Atomic # 6 Polarization: -5.67 SS G_CDS: -0.61 Total: -6.28 kcal Atomic # 7 Polarization: -41.08 SS G_CDS: 0.50 Total: -40.58 kcal Atomic # 8 Polarization: -5.60 SS G_CDS: -0.20 Total: -5.80 kcal Atomic # 14 Polarization: 21.94 SS G_CDS: -4.24 Total: 17.70 kcal Atomic # 17 Polarization: -1.17 SS G_CDS: -1.41 Total: -2.58 kcal Total LS contribution 4.26 Total: 4.26 kcal Total: -30.80 -5.45 -36.25 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000049819872.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.828 kcal (2) G-P(sol) polarization free energy of solvation -30.800 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.028 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.447 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.247 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.581 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds