Wall clock time and date at job start Mon Mar 30 2020 06:39:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50688 * 1 3 3 C 1.38293 * 119.93290 * 2 1 4 4 C 1.38088 * 120.08428 * 180.02562 * 3 2 1 5 5 C 1.38940 * 119.95924 * 359.97438 * 4 3 2 6 6 N 1.39669 * 120.07438 * 179.97438 * 5 4 3 7 7 C 1.46497 * 120.00399 * 180.02562 * 6 5 4 8 8 C 1.52997 * 109.47195 * 179.97438 * 7 6 5 9 9 H 1.09002 * 109.47153 * 304.99547 * 8 7 6 10 10 O 1.42898 * 109.47319 * 64.99855 * 8 7 6 11 11 C 1.50699 * 109.47078 * 184.99754 * 8 7 6 12 12 H 1.07999 * 120.00019 * 359.97438 * 11 8 7 13 13 C 1.37877 * 120.00129 * 180.02562 * 11 8 7 14 14 N 1.31519 * 119.99723 * 359.97438 * 13 11 8 15 15 Si 1.86803 * 119.99900 * 179.97438 * 13 11 8 16 16 H 1.48491 * 109.47312 * 359.97438 * 15 13 11 17 17 H 1.48501 * 109.46948 * 119.99892 * 15 13 11 18 18 H 1.48500 * 109.46809 * 239.99811 * 15 13 11 19 19 C 1.38874 * 119.85721 * 0.25013 * 5 4 3 20 20 C 1.38238 * 119.91237 * 359.51609 * 19 5 4 21 21 Cl 1.73598 * 119.97380 * 180.20920 * 20 19 5 22 22 H 1.08995 * 109.47656 * 89.99661 * 1 2 3 23 23 H 1.09001 * 109.47480 * 209.99994 * 1 2 3 24 24 H 1.09004 * 109.47261 * 329.99865 * 1 2 3 25 25 H 1.07997 * 119.95339 * 359.97438 * 3 2 1 26 26 H 1.08004 * 120.01875 * 179.97438 * 4 3 2 27 27 H 0.96999 * 119.99559 * 359.97438 * 6 5 4 28 28 H 1.09001 * 109.47117 * 59.99107 * 7 6 5 29 29 H 1.09004 * 109.46581 * 299.99760 * 7 6 5 30 30 H 0.96698 * 113.99898 * 59.99520 * 10 8 7 31 31 H 0.97003 * 119.99231 * 179.97438 * 14 13 11 32 32 H 1.07999 * 120.03879 * 179.72528 * 19 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1969 1.1985 0.0000 4 6 3.5778 1.2021 -0.0005 5 6 4.2748 0.0002 -0.0005 6 7 5.6715 0.0011 -0.0016 7 6 6.4049 -1.2671 -0.0022 8 6 7.9089 -0.9865 -0.0040 9 1 8.1570 -0.3407 -0.8463 10 8 8.2742 -0.3391 1.2164 11 6 8.6622 -2.2858 -0.1283 12 1 8.1222 -3.2184 -0.1986 13 6 10.0408 -2.2840 -0.1514 14 7 10.6983 -1.1483 -0.0653 15 14 10.9744 -3.8947 -0.3048 16 1 10.0095 -5.0205 -0.3842 17 1 11.8077 -3.8686 -1.5337 18 1 11.8483 -4.0751 0.8822 19 6 3.5798 -1.2021 -0.0053 20 6 2.1974 -1.1992 0.0002 21 17 1.3270 -2.7012 -0.0002 22 1 -0.3634 0.0001 -1.0276 23 1 -0.3634 -0.8900 0.5138 24 1 -0.3634 0.8900 0.5139 25 1 1.6551 2.1327 -0.0004 26 1 4.1157 2.1387 -0.0010 27 1 6.1559 0.8415 -0.0027 28 1 6.1412 -1.8389 -0.8919 29 1 6.1426 -1.8388 0.8881 30 1 8.0816 -0.8576 2.0096 31 1 11.6682 -1.1471 -0.0811 32 1 4.1186 -2.1380 -0.0098 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000221872034.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:39:04 Heat of formation + Delta-G solvation = -45.943569 kcal Electronic energy + Delta-G solvation = -16082.977542 eV Core-core repulsion = 13261.550716 eV Total energy + Delta-G solvation = -2821.426826 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -39.43807 -36.87518 -36.18805 -34.59183 -32.24676 -31.33020 -30.56809 -28.46663 -25.89948 -24.32882 -22.72591 -21.05650 -20.58510 -17.48619 -16.94206 -15.80480 -15.17399 -14.72843 -14.60499 -14.48020 -14.04235 -13.92644 -13.54415 -13.43242 -12.62658 -12.55873 -12.16798 -12.01505 -11.65430 -11.29248 -11.17274 -11.01484 -10.97450 -10.85738 -10.66701 -10.20534 -9.48968 -9.21352 -8.70922 -8.64629 -8.35670 -7.03762 -6.13860 -4.32975 1.39991 1.67874 2.27118 3.20816 3.29450 3.32690 3.88880 3.90035 4.32744 4.91175 5.08648 5.14453 5.25681 5.42922 5.62654 5.65972 5.79720 5.88598 5.95525 5.98265 6.08854 6.22021 6.35621 6.46564 6.61133 6.63159 6.90419 7.48630 7.63430 7.74056 7.97586 8.16685 8.69919 9.21543 9.44118 10.90812 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.033157 B = 0.004476 C = 0.004006 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 844.265717 B = 6254.349559 C = 6987.208641 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.104 4.104 2 C -0.157 4.157 3 C -0.059 4.059 4 C -0.199 4.199 5 C 0.237 3.763 6 N -0.728 5.728 7 C 0.092 3.908 8 C 0.221 3.779 9 H 0.062 0.938 10 O -0.565 6.565 11 C -0.574 4.574 12 H 0.060 0.940 13 C 0.080 3.920 14 N -0.858 5.858 15 Si 0.893 3.107 16 H -0.271 1.271 17 H -0.282 1.282 18 H -0.282 1.282 19 C -0.195 4.195 20 C 0.018 3.982 21 Cl -0.081 7.081 22 H 0.063 0.937 23 H 0.065 0.935 24 H 0.061 0.939 25 H 0.125 0.875 26 H 0.123 0.877 27 H 0.404 0.596 28 H 0.058 0.942 29 H 0.052 0.948 30 H 0.348 0.652 31 H 0.262 0.738 32 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -16.631 2.421 0.375 16.811 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.161 4.161 2 C -0.161 4.161 3 C -0.078 4.078 4 C -0.222 4.222 5 C 0.128 3.872 6 N -0.353 5.353 7 C -0.032 4.032 8 C 0.164 3.836 9 H 0.079 0.921 10 O -0.368 6.368 11 C -0.612 4.612 12 H 0.078 0.922 13 C -0.126 4.126 14 N -0.493 5.493 15 Si 0.720 3.280 16 H -0.196 1.196 17 H -0.208 1.208 18 H -0.208 1.208 19 C -0.219 4.219 20 C -0.009 4.009 21 Cl -0.052 7.052 22 H 0.082 0.918 23 H 0.084 0.916 24 H 0.080 0.920 25 H 0.143 0.857 26 H 0.141 0.859 27 H 0.239 0.761 28 H 0.076 0.924 29 H 0.070 0.930 30 H 0.192 0.808 31 H 0.071 0.929 32 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -16.193 2.649 -0.050 16.408 hybrid contribution 0.628 -1.215 0.210 1.383 sum -15.566 1.434 0.160 15.632 Atomic orbital electron populations 1.20657 0.91078 1.02485 1.01898 1.19353 0.96112 0.91303 1.09282 1.20604 0.93252 0.96604 0.97359 1.20674 0.94274 0.96546 1.10737 1.17802 0.84736 0.92881 0.91762 1.45115 1.01489 1.09936 1.78760 1.22485 0.96061 0.84398 1.00221 1.19581 0.84943 0.93876 0.85238 0.92054 1.86554 1.87159 1.47422 1.15623 1.21534 0.91838 0.92992 1.54886 0.92209 1.25030 0.97770 0.96299 0.93534 1.70083 1.07592 1.25202 1.46437 0.86545 0.79934 0.83682 0.77837 1.19565 1.20771 1.20777 1.20467 0.91943 0.97968 1.11528 1.20442 0.91586 0.85915 1.02929 1.98331 1.76824 1.33172 1.96852 0.91835 0.91610 0.91980 0.85735 0.85871 0.76089 0.92398 0.92993 0.80802 0.92858 0.85038 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.06 9.61 36.00 0.35 -0.72 16 2 C -0.16 -2.03 5.89 -104.55 -0.62 -2.64 16 3 C -0.06 -0.73 9.69 -39.62 -0.38 -1.11 16 4 C -0.20 -2.73 9.90 -39.38 -0.39 -3.12 16 5 C 0.24 3.74 6.65 -83.79 -0.56 3.18 16 6 N -0.73 -12.45 5.68 -58.64 -0.33 -12.78 16 7 C 0.09 1.79 4.49 -4.04 -0.02 1.77 16 8 C 0.22 5.25 2.86 -27.88 -0.08 5.17 16 9 H 0.06 1.60 8.14 -51.93 -0.42 1.18 16 10 O -0.56 -13.63 12.68 -35.23 -0.45 -14.07 16 11 C -0.57 -15.06 8.76 -34.44 -0.30 -15.36 16 12 H 0.06 1.53 7.74 -52.49 -0.41 1.12 16 13 C 0.08 2.17 5.40 -17.82 -0.10 2.08 16 14 N -0.86 -24.54 12.84 55.43 0.71 -23.83 16 15 Si 0.89 20.56 29.54 -169.99 -5.02 15.54 16 16 H -0.27 -6.14 7.11 56.52 0.40 -5.74 16 17 H -0.28 -6.46 7.11 56.52 0.40 -6.06 16 18 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 19 C -0.20 -3.07 9.09 -39.35 -0.36 -3.43 16 20 C 0.02 0.27 6.31 -39.53 -0.25 0.02 16 21 Cl -0.08 -1.06 27.28 -51.86 -1.41 -2.47 16 22 H 0.06 0.60 8.14 -51.93 -0.42 0.17 16 23 H 0.06 0.67 6.89 -51.93 -0.36 0.31 16 24 H 0.06 0.53 8.08 -51.93 -0.42 0.11 16 25 H 0.12 1.19 8.06 -52.49 -0.42 0.76 16 26 H 0.12 1.49 8.06 -52.48 -0.42 1.06 16 27 H 0.40 6.80 8.49 -40.82 -0.35 6.45 16 28 H 0.06 1.13 7.94 -51.93 -0.41 0.72 16 29 H 0.05 0.99 7.96 -51.93 -0.41 0.58 16 30 H 0.35 7.54 9.04 45.56 0.41 7.95 16 31 H 0.26 7.08 8.31 -40.82 -0.34 6.74 16 32 H 0.13 2.12 6.73 -52.49 -0.35 1.77 16 LS Contribution 291.56 15.07 4.39 4.39 Total: -1.00 -28.36 291.56 -7.94 -36.29 By element: Atomic # 1 Polarization: 14.20 SS G_CDS: -3.12 Total: 11.07 kcal Atomic # 6 Polarization: -11.45 SS G_CDS: -2.70 Total: -14.15 kcal Atomic # 7 Polarization: -36.98 SS G_CDS: 0.38 Total: -36.61 kcal Atomic # 8 Polarization: -13.63 SS G_CDS: -0.45 Total: -14.07 kcal Atomic # 14 Polarization: 20.56 SS G_CDS: -5.02 Total: 15.54 kcal Atomic # 17 Polarization: -1.06 SS G_CDS: -1.41 Total: -2.47 kcal Total LS contribution 4.39 Total: 4.39 kcal Total: -28.36 -7.94 -36.29 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000221872034.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.649 kcal (2) G-P(sol) polarization free energy of solvation -28.358 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.007 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.937 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.295 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.944 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds