Wall clock time and date at job start Mon Mar 30 2020 06:34:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.38277 * 119.96477 * 2 1 4 4 C 1.38239 * 120.12295 * 180.02562 * 3 2 1 5 5 C 1.38255 * 120.04379 * 0.02562 * 4 3 2 6 6 Cl 1.73594 * 120.04174 * 179.70298 * 5 4 3 7 7 C 1.38821 * 119.92114 * 359.97438 * 5 4 3 8 8 O 1.35930 * 120.05975 * 179.97438 * 7 5 4 9 9 C 1.38159 * 119.96231 * 179.97438 * 2 1 3 10 10 C 1.50695 * 120.01854 * 359.97219 * 9 2 1 11 11 H 1.08999 * 109.47542 * 15.01101 * 10 9 2 12 12 N 1.46907 * 109.46892 * 135.00365 * 10 9 2 13 13 C 1.52994 * 109.47655 * 255.00356 * 10 9 2 14 14 C 1.50698 * 109.47668 * 175.00305 * 13 10 9 15 15 H 1.08006 * 119.99781 * 359.97438 * 14 13 10 16 16 C 1.37875 * 120.00219 * 179.97438 * 14 13 10 17 17 N 1.31518 * 119.99976 * 179.97438 * 16 14 13 18 18 Si 1.86794 * 120.00053 * 0.02562 * 16 14 13 19 19 H 1.48506 * 109.47407 * 89.99958 * 18 16 14 20 20 H 1.48500 * 109.47164 * 209.99956 * 18 16 14 21 21 H 1.48498 * 109.47067 * 329.99806 * 18 16 14 22 22 H 1.09000 * 109.47311 * 90.00041 * 1 2 3 23 23 H 1.09001 * 109.47436 * 209.99450 * 1 2 3 24 24 H 1.09001 * 109.47268 * 329.99743 * 1 2 3 25 25 H 1.07999 * 119.93842 * 0.02562 * 3 2 1 26 26 H 1.08002 * 119.98202 * 179.97438 * 4 3 2 27 27 H 0.96701 * 113.99794 * 89.99523 * 8 7 5 28 28 H 1.00894 * 111.00006 * 296.04645 * 12 10 9 29 29 H 1.00901 * 110.99744 * 60.00220 * 12 10 9 30 30 H 1.09004 * 109.47335 * 295.00201 * 13 10 9 31 31 H 1.08997 * 109.47313 * 55.00142 * 13 10 9 32 32 H 0.97000 * 120.00199 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1976 1.1979 0.0000 4 6 3.5800 1.2018 -0.0005 5 6 4.2755 0.0069 -0.0016 6 17 6.0114 0.0117 -0.0101 7 6 3.5839 -1.1968 -0.0016 8 8 4.2649 -2.3733 -0.0032 9 6 2.1969 -1.1969 0.0005 10 6 1.4430 -2.5017 0.0018 11 1 0.4017 -2.3200 -0.2641 12 7 2.0457 -3.4164 -0.9772 13 6 1.5116 -3.1292 1.3954 14 6 0.6571 -4.3700 1.4304 15 1 0.1186 -4.6799 0.5470 16 6 0.5628 -5.1097 2.5901 17 7 -0.1833 -6.1923 2.6207 18 14 1.4936 -4.5734 4.1183 19 1 0.6403 -3.6631 4.9237 20 1 1.8456 -5.7674 4.9280 21 1 2.7348 -3.8632 3.7180 22 1 -0.3634 0.0000 -1.0276 23 1 -0.3634 -0.8900 0.5137 24 1 -0.3634 0.8900 0.5139 25 1 1.6560 2.1323 0.0004 26 1 4.1171 2.1387 -0.0010 27 1 4.4630 -2.7142 0.8798 28 1 1.9552 -3.0538 -1.9144 29 1 3.0120 -3.6008 -0.7526 30 1 2.5441 -3.3926 1.6250 31 1 1.1460 -2.4154 2.1336 32 1 -0.2494 -6.7129 3.4365 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259860026.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:34:59 Heat of formation + Delta-G solvation = -31.499193 kcal Electronic energy + Delta-G solvation = -17003.989107 eV Core-core repulsion = 14183.188635 eV Total energy + Delta-G solvation = -2820.800471 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -40.25167 -36.89428 -36.66228 -35.21601 -32.48086 -31.86425 -29.55371 -28.82320 -26.75517 -24.46463 -22.18866 -21.39504 -19.88808 -17.92550 -17.04662 -16.43457 -15.97143 -15.21751 -14.78523 -14.34949 -13.92906 -13.69174 -13.42229 -13.13364 -12.65722 -12.61863 -12.37496 -12.05625 -11.62946 -11.43056 -11.25114 -11.06568 -10.99324 -10.55844 -10.33053 -10.06607 -9.70905 -9.14331 -8.54096 -8.48590 -8.41026 -7.81635 -5.96765 -3.92070 1.09795 1.23318 2.13857 3.29874 3.37849 3.38595 3.48458 4.16870 4.47477 4.75803 4.88736 5.14314 5.24494 5.30748 5.44050 5.54594 5.69211 5.73735 5.89934 6.00739 6.10819 6.18262 6.27520 6.53019 6.61733 6.74496 7.01614 7.25842 7.66427 7.78694 8.03338 8.34066 8.65066 9.16401 9.64936 11.16989 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.022598 B = 0.007185 C = 0.006427 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1238.724997 B = 3896.002962 C = 4355.675313 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 C -0.062 4.062 3 C -0.120 4.120 4 C -0.108 4.108 5 C -0.069 4.069 6 Cl -0.069 7.069 7 C 0.122 3.878 8 O -0.484 6.484 9 C -0.120 4.120 10 C 0.143 3.857 11 H 0.089 0.911 12 N -0.819 5.819 13 C 0.002 3.998 14 C -0.493 4.493 15 H 0.081 0.919 16 C 0.063 3.937 17 N -0.904 5.904 18 Si 0.874 3.126 19 H -0.279 1.279 20 H -0.289 1.289 21 H -0.271 1.271 22 H 0.073 0.927 23 H 0.085 0.915 24 H 0.067 0.933 25 H 0.130 0.870 26 H 0.131 0.869 27 H 0.396 0.604 28 H 0.320 0.680 29 H 0.348 0.652 30 H 0.011 0.989 31 H 0.012 0.988 32 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.311 15.685 -4.809 17.960 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C -0.063 4.063 3 C -0.138 4.138 4 C -0.127 4.127 5 C -0.096 4.096 6 Cl -0.041 7.041 7 C 0.076 3.924 8 O -0.295 6.295 9 C -0.123 4.123 10 C 0.031 3.969 11 H 0.106 0.894 12 N -0.352 5.352 13 C -0.035 4.035 14 C -0.531 4.531 15 H 0.100 0.900 16 C -0.137 4.137 17 N -0.544 5.544 18 Si 0.702 3.298 19 H -0.205 1.205 20 H -0.215 1.215 21 H -0.196 1.196 22 H 0.092 0.908 23 H 0.104 0.896 24 H 0.086 0.914 25 H 0.148 0.852 26 H 0.149 0.851 27 H 0.254 0.746 28 H 0.130 0.870 29 H 0.168 0.832 30 H 0.029 0.971 31 H 0.031 0.969 32 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges 6.869 15.012 -5.027 17.257 hybrid contribution 1.475 1.051 1.274 2.215 sum 8.344 16.063 -3.753 18.486 Atomic orbital electron populations 1.20930 0.90379 1.03898 1.02734 1.19877 0.96827 0.91850 0.97743 1.20987 0.93125 0.97981 1.01696 1.20836 0.94212 0.96237 1.01394 1.21373 0.84626 0.94792 1.08783 1.98347 1.09762 1.98920 1.97022 1.18021 0.89211 0.84319 1.00874 1.84666 1.75470 1.35044 1.34314 1.21740 0.92744 0.99028 0.98793 1.20599 0.96569 0.83703 0.95997 0.89358 1.58970 1.25062 1.47604 1.03523 1.19570 0.97228 0.96598 0.90122 1.20993 1.26908 1.06572 0.98672 0.90050 1.25004 0.95266 0.94994 0.98416 1.69903 1.40110 1.16521 1.27843 0.86899 0.80861 0.78106 0.83963 1.20549 1.21473 1.19553 0.90849 0.89590 0.91437 0.85215 0.85086 0.74581 0.86962 0.83208 0.97088 0.96943 0.92926 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.53 9.24 36.00 0.33 -1.19 16 2 C -0.06 -0.87 5.88 -104.64 -0.62 -1.49 16 3 C -0.12 -1.44 9.70 -39.57 -0.38 -1.83 16 4 C -0.11 -1.33 9.83 -39.57 -0.39 -1.72 16 5 C -0.07 -0.97 6.33 -39.36 -0.25 -1.22 16 6 Cl -0.07 -0.90 28.50 -51.86 -1.48 -2.38 16 7 C 0.12 1.90 6.48 -39.19 -0.25 1.65 16 8 O -0.48 -7.39 9.39 -19.52 -0.18 -7.57 16 9 C -0.12 -1.95 4.95 -104.48 -0.52 -2.47 16 10 C 0.14 2.73 2.37 -68.87 -0.16 2.56 16 11 H 0.09 1.70 5.92 -51.93 -0.31 1.39 16 12 N -0.82 -15.52 8.82 -5.66 -0.05 -15.57 16 13 C 0.00 0.05 3.58 -27.89 -0.10 -0.05 16 14 C -0.49 -13.71 9.39 -34.44 -0.32 -14.03 16 15 H 0.08 2.50 7.99 -52.48 -0.42 2.08 16 16 C 0.06 1.82 5.47 -17.82 -0.10 1.73 16 17 N -0.90 -27.81 13.96 55.43 0.77 -27.04 16 18 Si 0.87 21.43 27.47 -169.99 -4.67 16.76 16 19 H -0.28 -6.77 7.11 56.52 0.40 -6.36 16 20 H -0.29 -7.11 7.11 56.52 0.40 -6.71 16 21 H -0.27 -6.28 6.54 56.52 0.37 -5.91 16 22 H 0.07 0.81 8.14 -51.93 -0.42 0.39 16 23 H 0.09 1.24 6.38 -51.93 -0.33 0.90 16 24 H 0.07 0.69 8.08 -51.93 -0.42 0.27 16 25 H 0.13 1.19 8.06 -52.49 -0.42 0.77 16 26 H 0.13 1.30 8.06 -52.49 -0.42 0.88 16 27 H 0.40 5.30 8.31 45.56 0.38 5.68 16 28 H 0.32 5.37 9.06 -39.29 -0.36 5.01 16 29 H 0.35 6.46 5.92 -39.29 -0.23 6.22 16 30 H 0.01 0.25 6.06 -51.93 -0.31 -0.07 16 31 H 0.01 0.28 7.57 -51.93 -0.39 -0.11 16 32 H 0.26 7.55 8.31 -40.82 -0.34 7.21 16 LS Contribution 279.98 15.07 4.22 4.22 Total: -1.00 -30.99 279.98 -6.98 -37.97 By element: Atomic # 1 Polarization: 14.49 SS G_CDS: -2.83 Total: 11.66 kcal Atomic # 6 Polarization: -15.30 SS G_CDS: -2.76 Total: -18.06 kcal Atomic # 7 Polarization: -43.33 SS G_CDS: 0.72 Total: -42.60 kcal Atomic # 8 Polarization: -7.39 SS G_CDS: -0.18 Total: -7.57 kcal Atomic # 14 Polarization: 21.43 SS G_CDS: -4.67 Total: 16.76 kcal Atomic # 17 Polarization: -0.90 SS G_CDS: -1.48 Total: -2.38 kcal Total LS contribution 4.22 Total: 4.22 kcal Total: -30.99 -6.98 -37.97 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259860026.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.471 kcal (2) G-P(sol) polarization free energy of solvation -30.992 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.521 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.978 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.970 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.499 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds