Wall clock time and date at job start Mon Mar 30 2020 06:42:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38289 * 119.98038 * 2 1 4 4 C 1.38240 * 120.11473 * 180.27559 * 3 2 1 5 5 C 1.50700 * 119.95742 * 179.77155 * 4 3 2 6 6 H 1.08997 * 109.47508 * 359.97438 * 5 4 3 7 7 C 1.50708 * 109.47007 * 239.97849 * 5 4 3 8 8 H 1.07995 * 119.99913 * 275.09715 * 7 5 4 9 9 C 1.37870 * 119.99741 * 95.09297 * 7 5 4 10 10 N 1.31513 * 120.00376 * 5.50592 * 9 7 5 11 11 Si 1.86800 * 120.00112 * 185.50383 * 9 7 5 12 12 H 1.48507 * 109.46753 * 0.02562 * 11 9 7 13 13 H 1.48500 * 109.47239 * 119.99833 * 11 9 7 14 14 H 1.48492 * 109.47414 * 240.00470 * 11 9 7 15 15 C 1.52997 * 109.46919 * 119.98466 * 5 4 3 16 16 N 1.46903 * 109.47198 * 185.34537 * 15 5 4 17 17 C 1.38197 * 120.07605 * 359.75077 * 4 3 2 18 18 C 1.38659 * 119.95881 * 0.02562 * 17 4 3 19 19 O 1.35921 * 120.05975 * 179.97438 * 18 17 4 20 20 C 1.38214 * 119.97416 * 179.77257 * 2 1 3 21 21 Cl 1.73599 * 120.03818 * 0.02562 * 20 2 1 22 22 H 1.09001 * 109.46960 * 270.23060 * 1 2 3 23 23 H 1.09006 * 109.47006 * 30.22560 * 1 2 3 24 24 H 1.08998 * 109.47862 * 150.22429 * 1 2 3 25 25 H 1.07991 * 119.94207 * 0.02562 * 3 2 1 26 26 H 0.97002 * 120.00632 * 179.97438 * 10 9 7 27 27 H 1.09002 * 109.47140 * 305.33959 * 15 5 4 28 28 H 1.08999 * 109.47808 * 65.34493 * 15 5 4 29 29 H 1.00909 * 110.99904 * 56.04269 * 16 15 5 30 30 H 1.00901 * 111.00290 * 179.97438 * 16 15 5 31 31 H 1.08004 * 120.01761 * 179.97438 * 17 4 3 32 32 H 0.96706 * 114.00139 * 270.02041 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1980 1.1979 0.0000 4 6 3.5804 1.2011 -0.0058 5 6 4.3299 2.5085 -0.0109 6 1 3.6191 3.3348 -0.0098 7 6 5.1913 2.5888 -1.2449 8 1 6.1747 2.1423 -1.2470 9 6 4.7240 3.2323 -2.3712 10 7 3.5737 3.8688 -2.3352 11 14 5.7246 3.2000 -3.9482 12 1 6.9706 2.4225 -3.7280 13 1 4.9279 2.5624 -5.0270 14 1 6.0708 4.5889 -4.3433 15 6 5.2141 2.5944 1.2347 16 7 5.8461 3.9191 1.2962 17 6 4.2758 0.0068 -0.0063 18 6 3.5861 -1.1960 -0.0016 19 8 4.2680 -2.3718 -0.0027 20 6 2.1975 -1.1973 0.0048 21 17 1.3299 -2.7009 0.0100 22 1 -0.3633 0.0041 1.0277 23 1 -0.3633 0.8880 -0.5174 24 1 -0.3635 -0.8919 -0.5103 25 1 1.6568 2.1324 0.0004 26 1 3.2451 4.3218 -3.1275 27 1 4.6038 2.4414 2.1248 28 1 5.9855 1.8258 1.1865 29 1 5.1526 4.6519 1.2767 30 1 6.4355 4.0011 2.1111 31 1 5.3558 0.0105 -0.0112 32 1 4.4619 -2.7133 -0.8865 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259872279.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:42:45 Heat of formation + Delta-G solvation = -40.295483 kcal Electronic energy + Delta-G solvation = -16791.897903 eV Core-core repulsion = 13970.715996 eV Total energy + Delta-G solvation = -2821.181907 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -39.40471 -36.75871 -36.16674 -34.96473 -32.36409 -31.84830 -29.78342 -27.39080 -26.34731 -24.26369 -21.86694 -21.60614 -19.35571 -17.49353 -16.63711 -16.05125 -15.47799 -15.02365 -14.65104 -14.37553 -13.71811 -13.40878 -12.94883 -12.67126 -12.53513 -12.21860 -12.02023 -11.84641 -11.40240 -11.17917 -10.92582 -10.89562 -10.71576 -10.47589 -10.44232 -9.92870 -9.48092 -9.12914 -8.51116 -8.03175 -7.80310 -7.65709 -6.07544 -4.05604 1.78453 1.85393 2.60901 3.28951 3.37307 3.41388 4.14571 4.42356 4.62905 5.16652 5.27492 5.48410 5.57233 5.77669 5.88650 5.98724 6.10544 6.14835 6.20997 6.30528 6.37641 6.62053 6.75145 6.84693 7.05154 7.21944 7.43425 7.70271 7.87229 7.98940 8.02188 8.26067 8.32777 8.97413 9.54908 11.01733 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.020757 B = 0.007066 C = 0.006712 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1348.599075 B = 3961.487202 C = 4170.481800 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.113 4.113 2 C -0.070 4.070 3 C -0.118 4.118 4 C 0.001 3.999 5 C 0.060 3.940 6 H 0.071 0.929 7 C -0.478 4.478 8 H 0.058 0.942 9 C 0.065 3.935 10 N -0.890 5.890 11 Si 0.891 3.109 12 H -0.273 1.273 13 H -0.286 1.286 14 H -0.284 1.284 15 C 0.080 3.920 16 N -0.831 5.831 17 C -0.132 4.132 18 C 0.106 3.894 19 O -0.494 6.494 20 C -0.090 4.090 21 Cl -0.086 7.086 22 H 0.068 0.932 23 H 0.069 0.931 24 H 0.066 0.934 25 H 0.128 0.872 26 H 0.260 0.740 27 H -0.004 1.004 28 H 0.056 0.944 29 H 0.336 0.664 30 H 0.320 0.680 31 H 0.131 0.869 32 H 0.384 0.616 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.593 -6.826 4.799 9.085 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.071 4.071 3 C -0.136 4.136 4 C -0.001 4.001 5 C 0.041 3.959 6 H 0.089 0.911 7 C -0.516 4.516 8 H 0.076 0.924 9 C -0.137 4.137 10 N -0.529 5.529 11 Si 0.719 3.281 12 H -0.197 1.197 13 H -0.212 1.212 14 H -0.210 1.210 15 C -0.051 4.051 16 N -0.359 5.359 17 C -0.151 4.151 18 C 0.061 3.939 19 O -0.304 6.304 20 C -0.117 4.117 21 Cl -0.057 7.057 22 H 0.086 0.914 23 H 0.088 0.912 24 H 0.085 0.915 25 H 0.146 0.854 26 H 0.070 0.930 27 H 0.014 0.986 28 H 0.074 0.926 29 H 0.148 0.852 30 H 0.130 0.870 31 H 0.148 0.852 32 H 0.239 0.761 Dipole moment (debyes) X Y Z Total from point charges -3.474 -7.002 4.596 9.068 hybrid contribution -0.073 -0.144 -0.714 0.731 sum -3.547 -7.146 3.883 8.872 Atomic orbital electron populations 1.20788 0.91064 1.02928 1.02152 1.19589 0.96062 0.91264 1.00171 1.21008 0.94237 0.96383 1.01999 1.20794 0.93001 0.97142 0.89156 1.18133 0.94537 0.90102 0.93087 0.91069 1.20808 1.00498 1.34616 0.95634 0.92414 1.24936 0.95091 0.94661 0.98975 1.69893 1.19993 1.33841 1.29124 0.86552 0.80304 0.77777 0.83476 1.19714 1.21247 1.21041 1.21852 0.96430 0.90604 0.96215 1.58479 1.26904 1.04401 1.46088 1.21195 1.00637 0.90389 1.02849 1.18170 0.87664 0.85863 1.02181 1.84792 1.76090 1.36354 1.33130 1.20964 0.91180 0.86306 1.13219 1.98285 1.76846 1.33277 1.97326 0.91363 0.91230 0.91465 0.85448 0.93002 0.98592 0.92601 0.85165 0.86955 0.85156 0.76070 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.63 9.61 36.01 0.35 -1.29 16 2 C -0.07 -1.25 5.88 -104.61 -0.62 -1.87 16 3 C -0.12 -2.34 9.32 -39.56 -0.37 -2.71 16 4 C 0.00 0.01 4.77 -104.64 -0.50 -0.49 16 5 C 0.06 1.38 2.25 -92.92 -0.21 1.17 16 6 H 0.07 1.78 6.96 -51.93 -0.36 1.42 16 7 C -0.48 -12.27 7.67 -34.44 -0.26 -12.54 16 8 H 0.06 1.52 7.82 -52.49 -0.41 1.11 16 9 C 0.07 1.73 5.45 -17.82 -0.10 1.64 16 10 N -0.89 -24.37 12.77 55.43 0.71 -23.67 16 11 Si 0.89 21.03 29.54 -169.99 -5.02 16.01 16 12 H -0.27 -6.38 7.11 56.52 0.40 -5.98 16 13 H -0.29 -6.78 7.11 56.52 0.40 -6.38 16 14 H -0.28 -6.73 7.11 56.52 0.40 -6.32 16 15 C 0.08 1.58 5.89 -3.82 -0.02 1.56 16 16 N -0.83 -15.54 9.35 -10.37 -0.10 -15.64 16 17 C -0.13 -2.63 8.80 -39.44 -0.35 -2.97 16 18 C 0.11 1.96 6.70 -39.20 -0.26 1.69 16 19 O -0.49 -7.98 12.96 -19.49 -0.25 -8.24 16 20 C -0.09 -1.61 6.33 -39.36 -0.25 -1.86 16 21 Cl -0.09 -1.34 26.84 -51.86 -1.39 -2.73 16 22 H 0.07 0.89 8.14 -51.93 -0.42 0.46 16 23 H 0.07 0.96 8.09 -51.93 -0.42 0.54 16 24 H 0.07 0.92 6.90 -51.93 -0.36 0.57 16 25 H 0.13 2.50 7.94 -52.49 -0.42 2.09 16 26 H 0.26 6.88 8.31 -40.82 -0.34 6.54 16 27 H 0.00 -0.07 8.14 -51.93 -0.42 -0.50 16 28 H 0.06 1.12 7.58 -51.93 -0.39 0.72 16 29 H 0.34 6.15 8.99 -39.29 -0.35 5.79 16 30 H 0.32 4.93 9.08 -39.29 -0.36 4.57 16 31 H 0.13 2.56 7.64 -52.48 -0.40 2.16 16 32 H 0.38 4.60 9.06 45.56 0.41 5.01 16 LS Contribution 290.13 15.07 4.37 4.37 Total: -1.00 -28.43 290.13 -7.31 -35.74 By element: Atomic # 1 Polarization: 14.84 SS G_CDS: -3.04 Total: 11.80 kcal Atomic # 6 Polarization: -15.07 SS G_CDS: -2.59 Total: -17.66 kcal Atomic # 7 Polarization: -39.91 SS G_CDS: 0.61 Total: -39.30 kcal Atomic # 8 Polarization: -7.98 SS G_CDS: -0.25 Total: -8.24 kcal Atomic # 14 Polarization: 21.03 SS G_CDS: -5.02 Total: 16.01 kcal Atomic # 17 Polarization: -1.34 SS G_CDS: -1.39 Total: -2.73 kcal Total LS contribution 4.37 Total: 4.37 kcal Total: -28.43 -7.31 -35.74 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259872279.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -4.555 kcal (2) G-P(sol) polarization free energy of solvation -28.429 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.984 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.311 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.741 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.295 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds