Wall clock time and date at job start Mon Mar 30 2020 06:37:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35900 * 117.00043 * 2 1 4 4 C 1.38758 * 120.05051 * 0.02562 * 3 2 1 5 5 C 1.38129 * 119.96886 * 179.97438 * 4 3 2 6 6 C 1.38270 * 120.07133 * 359.72881 * 5 4 3 7 7 C 1.50697 * 119.95057 * 180.29322 * 6 5 4 8 8 C 1.38366 * 120.09307 * 0.54763 * 6 5 4 9 9 Cl 1.73603 * 119.98314 * 179.72282 * 8 6 5 10 10 C 1.38281 * 120.03272 * 359.44858 * 8 6 5 11 11 C 1.50692 * 120.03627 * 180.25197 * 10 8 6 12 12 H 1.09004 * 109.47357 * 13.15413 * 11 10 8 13 13 N 1.46892 * 109.47212 * 133.15034 * 11 10 8 14 14 C 1.50704 * 109.47183 * 253.15407 * 11 10 8 15 15 H 1.07998 * 120.00073 * 359.97438 * 14 11 10 16 16 C 1.37883 * 119.99522 * 180.02562 * 14 11 10 17 17 N 1.31511 * 120.00124 * 359.97438 * 16 14 11 18 18 Si 1.86806 * 119.99217 * 179.97438 * 16 14 11 19 19 H 1.48493 * 109.47552 * 359.97438 * 18 16 14 20 20 H 1.48506 * 109.46630 * 120.00082 * 18 16 14 21 21 H 1.48504 * 109.46748 * 239.99327 * 18 16 14 22 22 H 1.08998 * 109.46888 * 59.99935 * 1 2 3 23 23 H 1.08998 * 109.46972 * 180.02562 * 1 2 3 24 24 H 1.09000 * 109.46930 * 300.00120 * 1 2 3 25 25 H 1.07997 * 120.01594 * 359.95757 * 4 3 2 26 26 H 1.08005 * 119.96391 * 179.97438 * 5 4 3 27 27 H 1.09000 * 109.47112 * 270.24909 * 7 6 5 28 28 H 1.09003 * 109.47287 * 30.25610 * 7 6 5 29 29 H 1.09005 * 109.46827 * 150.25128 * 7 6 5 30 30 H 1.00903 * 111.00030 * 68.07964 * 13 11 10 31 31 H 1.00896 * 111.00578 * 192.02888 * 13 11 10 32 32 H 0.97000 * 119.99200 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 1.2913 2.3753 0.0005 5 6 1.9201 3.6051 0.0011 6 6 3.3009 3.6772 0.0067 7 6 3.9842 5.0204 0.0140 8 6 4.0562 2.5179 0.0004 9 17 5.7897 2.6118 0.0003 10 6 3.4310 1.2845 0.0000 11 6 4.2535 0.0219 -0.0011 12 1 5.2904 0.2635 0.2324 13 7 3.7276 -0.9060 1.0089 14 6 4.1821 -0.6230 -1.3614 15 1 3.5990 -0.1646 -2.1464 16 6 4.8603 -1.7988 -1.6032 17 7 5.5699 -2.3573 -0.6471 18 14 4.7712 -2.5985 -3.2891 19 1 3.9133 -1.7782 -4.1814 20 1 6.1368 -2.6935 -3.8647 21 1 4.1922 -3.9600 -3.1611 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3633 0.5139 0.8900 25 1 0.2127 2.3200 0.0003 26 1 1.3326 4.5114 0.0011 27 1 4.1489 5.3497 -1.0119 28 1 3.3557 5.7450 0.5318 29 1 4.9422 4.9379 0.5274 30 1 2.8155 -1.2481 0.7457 31 1 4.3681 -1.6693 1.1672 32 1 6.0467 -3.1847 -0.8173 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260107219.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:37:55 Heat of formation + Delta-G solvation = -25.565038 kcal Electronic energy + Delta-G solvation = -17205.873216 eV Core-core repulsion = 14385.330069 eV Total energy + Delta-G solvation = -2820.543147 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -39.75525 -37.31257 -35.58497 -34.72713 -31.86191 -31.00268 -29.42831 -27.40601 -25.87560 -25.41550 -22.95018 -21.27725 -19.64280 -17.50783 -16.63177 -15.92584 -15.16244 -14.96638 -14.38544 -14.27116 -13.79881 -13.58579 -13.42815 -12.77456 -12.46633 -12.10268 -11.96938 -11.47194 -11.36730 -11.21701 -11.20325 -10.98128 -10.68647 -10.50361 -10.24898 -10.15632 -9.86111 -9.29920 -8.51090 -8.03809 -7.42067 -7.03701 -5.97678 -4.10524 1.74294 1.94734 2.79234 3.27075 3.35225 3.40316 3.93179 4.18601 4.43538 5.13295 5.24565 5.32663 5.37591 5.48279 5.49293 5.62947 5.79062 5.81642 5.88312 6.12074 6.21765 6.48866 6.60626 6.84439 6.86727 7.03036 7.13894 7.76888 7.85600 8.01285 8.23358 8.83578 9.08954 9.33412 9.58639 11.00894 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.019018 B = 0.009520 C = 0.007385 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1471.917655 B = 2940.355503 C = 3790.428889 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.284 6.284 3 C 0.146 3.854 4 C -0.212 4.212 5 C -0.097 4.097 6 C -0.123 4.123 7 C -0.107 4.107 8 C -0.006 4.006 9 Cl -0.063 7.063 10 C -0.045 4.045 11 C 0.242 3.758 12 H 0.059 0.941 13 N -0.848 5.848 14 C -0.524 4.524 15 H 0.052 0.948 16 C 0.065 3.935 17 N -0.895 5.895 18 Si 0.894 3.106 19 H -0.274 1.274 20 H -0.284 1.284 21 H -0.285 1.285 22 H 0.047 0.953 23 H 0.094 0.906 24 H 0.048 0.952 25 H 0.123 0.877 26 H 0.121 0.879 27 H 0.065 0.935 28 H 0.061 0.939 29 H 0.068 0.932 30 H 0.325 0.675 31 H 0.348 0.652 32 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.425 9.538 1.664 12.201 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.196 6.196 3 C 0.100 3.900 4 C -0.231 4.231 5 C -0.116 4.116 6 C -0.125 4.125 7 C -0.164 4.164 8 C -0.033 4.033 9 Cl -0.034 7.034 10 C -0.047 4.047 11 C 0.132 3.868 12 H 0.077 0.923 13 N -0.380 5.380 14 C -0.564 4.564 15 H 0.070 0.930 16 C -0.136 4.136 17 N -0.535 5.535 18 Si 0.722 3.278 19 H -0.199 1.199 20 H -0.210 1.210 21 H -0.211 1.211 22 H 0.065 0.935 23 H 0.113 0.887 24 H 0.066 0.934 25 H 0.141 0.859 26 H 0.139 0.861 27 H 0.084 0.916 28 H 0.080 0.920 29 H 0.087 0.913 30 H 0.138 0.862 31 H 0.163 0.837 32 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges -7.027 9.811 2.209 12.268 hybrid contribution -0.185 -1.087 -1.848 2.152 sum -7.212 8.725 0.361 11.325 Atomic orbital electron populations 1.22982 0.80304 1.03341 1.00317 1.86240 1.19341 1.26009 1.88011 1.18588 0.91289 0.83989 0.96181 1.21176 0.99575 0.92505 1.09851 1.20430 0.92850 0.96795 1.01503 1.19495 0.93369 0.94161 1.05430 1.20707 1.00524 0.93085 1.02039 1.20290 0.84366 0.93244 1.05407 1.98315 1.10195 1.98137 1.96783 1.19741 0.91379 0.96241 0.97346 1.17994 0.93051 0.85202 0.90554 0.92287 1.59495 1.07631 1.23411 1.47423 1.21711 1.29774 1.07387 0.97565 0.93000 1.24945 0.94673 0.97038 0.96969 1.69788 1.31902 1.19557 1.32210 0.86509 0.77758 0.79089 0.84451 1.19882 1.20997 1.21081 0.93452 0.88729 0.93384 0.85922 0.86058 0.91600 0.92020 0.91304 0.86197 0.83709 0.92759 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.37 9.81 101.05 0.99 1.36 16 2 O -0.28 -5.63 7.35 -19.43 -0.14 -5.77 16 3 C 0.15 2.98 6.44 -39.22 -0.25 2.72 16 4 C -0.21 -3.55 9.04 -39.43 -0.36 -3.90 16 5 C -0.10 -1.52 9.69 -39.61 -0.38 -1.91 16 6 C -0.12 -2.11 5.88 -104.56 -0.62 -2.73 16 7 C -0.11 -1.44 9.61 36.00 0.35 -1.10 16 8 C -0.01 -0.12 6.31 -39.52 -0.25 -0.37 16 9 Cl -0.06 -1.25 25.39 -51.86 -1.32 -2.57 16 10 C -0.05 -1.03 4.90 -104.44 -0.51 -1.54 16 11 C 0.24 6.26 2.64 -70.02 -0.18 6.07 16 12 H 0.06 1.64 6.32 -51.93 -0.33 1.32 16 13 N -0.85 -21.36 8.92 -6.66 -0.06 -21.41 16 14 C -0.52 -14.56 8.36 -34.44 -0.29 -14.84 16 15 H 0.05 1.48 7.74 -52.49 -0.41 1.08 16 16 C 0.07 1.81 5.39 -17.82 -0.10 1.72 16 17 N -0.89 -25.26 11.67 55.43 0.65 -24.61 16 18 Si 0.89 21.62 29.54 -169.99 -5.02 16.60 16 19 H -0.27 -6.63 7.11 56.52 0.40 -6.23 16 20 H -0.28 -6.85 7.11 56.52 0.40 -6.44 16 21 H -0.28 -6.81 7.11 56.52 0.40 -6.41 16 22 H 0.05 0.59 7.66 -51.93 -0.40 0.19 16 23 H 0.09 1.13 8.14 -51.93 -0.42 0.70 16 24 H 0.05 0.58 7.66 -51.93 -0.40 0.18 16 25 H 0.12 1.66 6.30 -52.49 -0.33 1.33 16 26 H 0.12 1.48 8.06 -52.48 -0.42 1.06 16 27 H 0.07 0.83 8.14 -51.93 -0.42 0.41 16 28 H 0.06 0.69 8.09 -51.93 -0.42 0.27 16 29 H 0.07 0.94 6.90 -51.93 -0.36 0.58 16 30 H 0.33 8.03 6.30 -39.29 -0.25 7.78 16 31 H 0.35 9.25 7.34 -39.29 -0.29 8.96 16 32 H 0.26 7.08 8.31 -40.82 -0.34 6.74 16 LS Contribution 279.22 15.07 4.21 4.21 Total: -1.00 -29.71 279.22 -6.86 -36.58 By element: Atomic # 1 Polarization: 15.09 SS G_CDS: -3.58 Total: 11.51 kcal Atomic # 6 Polarization: -12.92 SS G_CDS: -1.60 Total: -14.52 kcal Atomic # 7 Polarization: -46.62 SS G_CDS: 0.59 Total: -46.03 kcal Atomic # 8 Polarization: -5.63 SS G_CDS: -0.14 Total: -5.77 kcal Atomic # 14 Polarization: 21.62 SS G_CDS: -5.02 Total: 16.60 kcal Atomic # 17 Polarization: -1.25 SS G_CDS: -1.32 Total: -2.57 kcal Total LS contribution 4.21 Total: 4.21 kcal Total: -29.71 -6.86 -36.58 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260107219.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.010 kcal (2) G-P(sol) polarization free energy of solvation -29.712 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -18.702 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.863 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.575 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.565 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds