Wall clock time and date at job start Mon Mar 30 2020 06:35:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.38190 * 119.95943 * 2 1 4 4 C 1.38666 * 119.95309 * 179.97438 * 3 2 1 5 5 O 1.35934 * 120.05558 * 179.97438 * 4 3 2 6 6 C 1.38857 * 119.88328 * 0.02562 * 4 3 2 7 7 Cl 1.73595 * 120.03685 * 179.72375 * 6 4 3 8 8 C 1.38209 * 119.92258 * 359.97438 * 6 4 3 9 9 C 1.50693 * 119.97968 * 179.97438 * 8 6 4 10 10 C 1.38230 * 119.95982 * 180.02562 * 2 1 3 11 11 C 1.50702 * 119.94149 * 0.02562 * 10 2 1 12 12 H 1.09000 * 109.47186 * 169.87707 * 11 10 2 13 13 N 1.46898 * 109.47052 * 49.87770 * 11 10 2 14 14 C 1.50697 * 109.47050 * 289.87486 * 11 10 2 15 15 H 1.08003 * 119.99933 * 0.02562 * 14 11 10 16 16 C 1.37880 * 120.00220 * 179.97438 * 14 11 10 17 17 N 1.31515 * 119.99764 * 0.02562 * 16 14 11 18 18 Si 1.86793 * 120.00230 * 180.02562 * 16 14 11 19 19 H 1.48500 * 109.47056 * 60.00317 * 18 16 14 20 20 H 1.48502 * 109.47256 * 180.02562 * 18 16 14 21 21 H 1.48505 * 109.47200 * 300.00379 * 18 16 14 22 22 H 1.08999 * 109.47355 * 96.62543 * 1 2 3 23 23 H 1.08999 * 109.47157 * 216.62831 * 1 2 3 24 24 H 1.08996 * 109.47207 * 336.62697 * 1 2 3 25 25 H 1.08006 * 120.02625 * 0.02562 * 3 2 1 26 26 H 0.96700 * 113.99617 * 270.01711 * 5 4 3 27 27 H 1.08996 * 109.47186 * 98.06966 * 9 8 6 28 28 H 1.09001 * 109.47248 * 218.07230 * 9 8 6 29 29 H 1.09003 * 109.47544 * 338.06830 * 9 8 6 30 30 H 1.00906 * 110.99898 * 293.35143 * 13 11 10 31 31 H 1.00898 * 111.00113 * 57.31069 * 13 11 10 32 32 H 0.96998 * 119.99920 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1971 1.1972 0.0000 4 6 3.5838 1.1971 0.0005 5 8 4.2647 2.3736 0.0000 6 6 4.2755 -0.0069 0.0005 7 17 6.0114 -0.0118 -0.0060 8 6 3.5803 -1.2014 0.0005 9 6 4.3296 -2.5088 -0.0001 10 6 2.1974 -1.1976 -0.0005 11 6 1.4416 -2.5014 -0.0017 12 1 2.1347 -3.3230 -0.1826 13 7 0.4243 -2.4767 -1.0611 14 6 0.7713 -2.6946 1.3341 15 1 0.8812 -1.9478 2.1065 16 6 0.0168 -3.8244 1.5698 17 7 -0.1174 -4.7336 0.6291 18 14 -0.8146 -4.0636 3.2253 19 1 -1.7587 -2.9440 3.4714 20 1 -1.5593 -5.3484 3.2243 21 1 0.2135 -4.0887 4.2966 22 1 -0.3634 -0.1186 -1.0208 23 1 -0.3633 -0.8247 0.6131 24 1 -0.3633 0.9433 0.4077 25 1 1.6569 2.1325 0.0004 26 1 4.4619 2.7135 -0.8836 27 1 4.3855 -2.8960 1.0173 28 1 3.8082 -3.2262 -0.6337 29 1 5.3373 -2.3500 -0.3842 30 1 -0.2913 -1.7945 -0.8595 31 1 0.8446 -2.3045 -1.9621 32 1 -0.6478 -5.5285 0.7951 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260163937.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:35:07 Heat of formation + Delta-G solvation = -23.986082 kcal Electronic energy + Delta-G solvation = -17130.897394 eV Core-core repulsion = 14310.422716 eV Total energy + Delta-G solvation = -2820.474678 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -39.82584 -37.31404 -36.24139 -34.17056 -33.01568 -31.61171 -29.21483 -27.29410 -26.32775 -25.66886 -22.48457 -20.44267 -20.20742 -17.64978 -16.90188 -15.95208 -15.61515 -14.84704 -14.50819 -14.04702 -13.58102 -13.16388 -13.07545 -12.75468 -12.47990 -12.41966 -11.88568 -11.84511 -11.63704 -11.10411 -10.99669 -10.80286 -10.77647 -10.59923 -10.41190 -10.13584 -9.84097 -9.19199 -8.48218 -8.12934 -7.85801 -7.05482 -5.95569 -4.10251 1.53789 1.65389 2.48271 3.30368 3.35895 3.38728 3.91087 4.36445 4.43631 5.13735 5.29214 5.37210 5.61869 5.71146 5.83345 5.95974 6.01091 6.12774 6.16998 6.31541 6.36699 6.51714 6.58200 6.82394 6.83573 6.99437 7.22890 7.55369 7.79463 7.82764 8.10581 8.56620 8.96049 9.07656 9.57230 11.08144 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.026755 B = 0.007070 C = 0.006463 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1046.280569 B = 3959.628085 C = 4331.248479 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C -0.057 4.057 3 C -0.146 4.146 4 C 0.091 3.909 5 O -0.491 6.491 6 C -0.069 4.069 7 Cl -0.077 7.077 8 C -0.061 4.061 9 C -0.116 4.116 10 C -0.074 4.074 11 C 0.253 3.747 12 H 0.057 0.943 13 N -0.820 5.820 14 C -0.534 4.534 15 H 0.055 0.945 16 C 0.085 3.915 17 N -0.843 5.843 18 Si 0.882 3.118 19 H -0.277 1.277 20 H -0.287 1.287 21 H -0.277 1.277 22 H 0.066 0.934 23 H 0.113 0.887 24 H 0.053 0.947 25 H 0.126 0.874 26 H 0.381 0.619 27 H 0.077 0.923 28 H 0.080 0.920 29 H 0.061 0.939 30 H 0.328 0.672 31 H 0.296 0.704 32 H 0.258 0.742 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.815 9.149 -3.984 11.549 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 C -0.058 4.058 3 C -0.164 4.164 4 C 0.046 3.954 5 O -0.300 6.300 6 C -0.096 4.096 7 Cl -0.049 7.049 8 C -0.063 4.063 9 C -0.172 4.172 10 C -0.077 4.077 11 C 0.143 3.857 12 H 0.075 0.925 13 N -0.349 5.349 14 C -0.573 4.573 15 H 0.073 0.927 16 C -0.123 4.123 17 N -0.477 5.477 18 Si 0.710 3.290 19 H -0.203 1.203 20 H -0.213 1.213 21 H -0.203 1.203 22 H 0.085 0.915 23 H 0.132 0.868 24 H 0.072 0.928 25 H 0.144 0.856 26 H 0.236 0.764 27 H 0.095 0.905 28 H 0.098 0.902 29 H 0.080 0.920 30 H 0.146 0.854 31 H 0.106 0.894 32 H 0.068 0.932 Dipole moment (debyes) X Y Z Total from point charges 5.676 8.120 -3.227 10.420 hybrid contribution 0.125 1.111 0.338 1.168 sum 5.802 9.231 -2.889 11.279 Atomic orbital electron populations 1.21247 0.90906 1.04064 1.02607 1.19731 0.96656 0.91644 0.97778 1.21151 0.92217 0.98525 1.04547 1.17964 0.89610 0.83732 1.04105 1.84860 1.76320 1.35922 1.32868 1.21219 0.83688 0.94401 1.10268 1.98301 1.10722 1.98724 1.97117 1.19630 0.93626 0.93624 0.99420 1.20866 0.98942 0.93938 1.03464 1.21616 0.92341 0.99315 0.94465 1.18294 0.89382 0.86181 0.91795 0.92518 1.59393 1.15266 1.57724 1.02564 1.20743 1.33472 1.05995 0.97042 0.92707 1.24940 0.95839 0.95683 0.95814 1.70092 1.37430 1.08623 1.31565 0.86843 0.79796 0.77450 0.84928 1.20254 1.21273 1.20303 0.91539 0.86832 0.92833 0.85594 0.76425 0.90465 0.90167 0.91984 0.85442 0.89431 0.93235 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.24 8.00 36.01 0.29 -1.95 16 2 C -0.06 -1.05 5.75 -104.64 -0.60 -1.66 16 3 C -0.15 -2.41 9.61 -39.44 -0.38 -2.79 16 4 C 0.09 1.51 6.70 -39.19 -0.26 1.25 16 5 O -0.49 -7.03 12.97 -19.53 -0.25 -7.28 16 6 C -0.07 -1.20 6.33 -39.36 -0.25 -1.45 16 7 Cl -0.08 -1.19 26.70 -51.86 -1.38 -2.58 16 8 C -0.06 -1.16 5.88 -104.62 -0.62 -1.78 16 9 C -0.12 -2.02 9.00 36.00 0.32 -1.70 16 10 C -0.07 -1.50 4.83 -104.60 -0.51 -2.01 16 11 C 0.25 5.83 2.55 -70.02 -0.18 5.65 16 12 H 0.06 1.42 5.59 -51.93 -0.29 1.13 16 13 N -0.82 -17.99 8.40 -6.65 -0.06 -18.05 16 14 C -0.53 -13.69 6.61 -34.44 -0.23 -13.92 16 15 H 0.05 1.43 7.71 -52.48 -0.40 1.03 16 16 C 0.08 2.24 5.39 -17.82 -0.10 2.14 16 17 N -0.84 -23.32 12.77 55.43 0.71 -22.62 16 18 Si 0.88 20.51 29.54 -169.99 -5.02 15.49 16 19 H -0.28 -6.37 7.11 56.52 0.40 -5.97 16 20 H -0.29 -6.67 7.11 56.52 0.40 -6.27 16 21 H -0.28 -6.48 7.11 56.52 0.40 -6.08 16 22 H 0.07 1.02 7.01 -51.93 -0.36 0.66 16 23 H 0.11 2.28 4.93 -51.93 -0.26 2.02 16 24 H 0.05 0.78 8.04 -51.93 -0.42 0.36 16 25 H 0.13 1.80 8.06 -52.48 -0.42 1.37 16 26 H 0.38 3.64 9.06 45.56 0.41 4.05 16 27 H 0.08 1.38 8.14 -51.93 -0.42 0.95 16 28 H 0.08 1.44 6.39 -51.93 -0.33 1.11 16 29 H 0.06 0.95 6.58 -51.93 -0.34 0.61 16 30 H 0.33 6.79 4.51 -39.29 -0.18 6.61 16 31 H 0.30 5.86 9.00 -39.29 -0.35 5.50 16 32 H 0.26 6.88 8.31 -40.82 -0.34 6.55 16 LS Contribution 275.69 15.07 4.15 4.15 Total: -1.00 -28.58 275.69 -6.86 -35.44 By element: Atomic # 1 Polarization: 16.15 SS G_CDS: -2.50 Total: 13.65 kcal Atomic # 6 Polarization: -15.71 SS G_CDS: -2.50 Total: -18.21 kcal Atomic # 7 Polarization: -41.32 SS G_CDS: 0.65 Total: -40.66 kcal Atomic # 8 Polarization: -7.03 SS G_CDS: -0.25 Total: -7.28 kcal Atomic # 14 Polarization: 20.51 SS G_CDS: -5.02 Total: 15.49 kcal Atomic # 17 Polarization: -1.19 SS G_CDS: -1.38 Total: -2.58 kcal Total LS contribution 4.15 Total: 4.15 kcal Total: -28.58 -6.86 -35.44 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260163937.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.457 kcal (2) G-P(sol) polarization free energy of solvation -28.582 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.125 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.861 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.443 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.986 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds