Wall clock time and date at job start Mon Mar 30 2020 06:38:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.35927 * 116.99854 * 2 1 4 4 C 1.38746 * 120.04230 * 0.02562 * 3 2 1 5 5 C 1.38124 * 119.95365 * 180.02562 * 4 3 2 6 6 C 1.50698 * 119.97515 * 180.02562 * 5 4 3 7 7 C 1.38383 * 120.04269 * 359.97224 * 5 4 3 8 8 Cl 1.73602 * 119.95530 * 180.02562 * 7 5 4 9 9 C 1.38341 * 120.08632 * 0.03259 * 7 5 4 10 10 C 1.50707 * 119.97916 * 179.97438 * 9 7 5 11 11 H 1.09005 * 109.46877 * 324.99412 * 10 9 7 12 12 N 1.46900 * 109.47130 * 204.99747 * 10 9 7 13 13 C 1.50696 * 109.47007 * 84.99135 * 10 9 7 14 14 H 1.07999 * 120.00319 * 0.02562 * 13 10 9 15 15 C 1.37885 * 119.99717 * 180.02562 * 13 10 9 16 16 N 1.31516 * 119.99913 * 180.02562 * 15 13 10 17 17 Si 1.86798 * 119.99766 * 0.02562 * 15 13 10 18 18 H 1.48500 * 109.47353 * 269.99586 * 17 15 13 19 19 H 1.48501 * 109.47293 * 30.00037 * 17 15 13 20 20 H 1.48504 * 109.46680 * 149.99835 * 17 15 13 21 21 C 1.38168 * 120.04504 * 0.26341 * 9 7 5 22 22 H 1.08993 * 109.46898 * 179.97438 * 1 2 3 23 23 H 1.08995 * 109.46895 * 299.99929 * 1 2 3 24 24 H 1.09005 * 109.46929 * 59.99874 * 1 2 3 25 25 H 1.07998 * 120.01996 * 0.02562 * 4 3 2 26 26 H 1.09002 * 109.47105 * 269.97756 * 6 5 4 27 27 H 1.09006 * 109.47496 * 29.97450 * 6 5 4 28 28 H 1.09000 * 109.47192 * 149.97105 * 6 5 4 29 29 H 1.00899 * 110.99700 * 299.99445 * 12 10 9 30 30 H 1.00893 * 110.99909 * 63.95117 * 12 10 9 31 31 H 0.97001 * 119.99646 * 179.97438 * 16 15 13 32 32 H 1.07998 * 120.02158 * 179.70892 * 21 9 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0461 1.2111 0.0000 4 6 1.2913 2.3753 0.0005 5 6 1.9202 3.6050 0.0000 6 6 1.1009 4.8698 0.0012 7 6 3.3022 3.6764 -0.0005 8 17 4.0904 5.2232 -0.0005 9 6 4.0565 2.5167 -0.0011 10 6 5.5615 2.5972 -0.0022 11 1 5.8788 3.4573 -0.5920 12 7 6.1171 1.3700 -0.5880 13 6 6.0575 2.7478 1.4127 14 1 5.3535 2.7814 2.2311 15 6 7.4102 2.8427 1.6627 16 7 7.8431 2.9737 2.8976 17 14 8.6277 2.7853 0.2471 18 1 9.0257 1.3774 -0.0067 19 1 7.9954 3.3486 -0.9728 20 1 9.8299 3.5845 0.5957 21 6 3.4312 1.2847 -0.0068 22 1 -0.3633 -1.0276 -0.0005 23 1 -0.3633 0.5138 0.8900 24 1 -0.3633 0.5139 -0.8900 25 1 0.2127 2.3199 0.0014 26 1 0.9024 5.1751 -1.0262 27 1 0.1567 4.6907 0.5157 28 1 1.6506 5.6584 0.5149 29 1 5.8370 0.5578 -0.0588 30 1 5.8513 1.2794 -1.5571 31 1 8.7947 3.0401 3.0734 32 1 4.0204 0.3796 -0.0120 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260261068.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:38:02 Heat of formation + Delta-G solvation = -22.125659 kcal Electronic energy + Delta-G solvation = -16872.538531 eV Core-core repulsion = 14052.144527 eV Total energy + Delta-G solvation = -2820.394004 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -40.04647 -37.86165 -35.65182 -35.05814 -32.21891 -31.28170 -29.44027 -27.83407 -26.44419 -26.05345 -22.82237 -21.50286 -19.55255 -17.39280 -16.90583 -16.31540 -16.04663 -15.66410 -14.77064 -14.25126 -13.96997 -13.78066 -13.61851 -13.09980 -12.50978 -12.38870 -12.21253 -12.03920 -11.72552 -11.60493 -11.45630 -10.94709 -10.65538 -10.51721 -10.19967 -10.00723 -9.71993 -9.27958 -8.50145 -8.24950 -7.74016 -7.68548 -5.97389 -4.07226 1.58039 1.66844 2.82812 3.38538 3.60270 3.63762 3.76945 3.97031 4.68146 4.85215 5.02462 5.07397 5.10530 5.21711 5.32111 5.41028 5.60038 5.70224 5.76778 5.84157 5.92248 5.99172 6.28958 6.37061 6.55458 6.68856 6.92435 7.05449 7.52451 7.62087 8.12245 8.30700 8.66931 9.01737 9.64856 11.12006 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.022490 B = 0.008104 C = 0.006608 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1244.688134 B = 3454.288125 C = 4236.509135 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.317 6.317 3 C 0.131 3.869 4 C -0.221 4.221 5 C -0.043 4.043 6 C -0.116 4.116 7 C -0.065 4.065 8 Cl -0.062 7.062 9 C -0.016 4.016 10 C 0.214 3.786 11 H 0.064 0.936 12 N -0.841 5.841 13 C -0.508 4.508 14 H 0.072 0.928 15 C 0.085 3.915 16 N -0.898 5.898 17 Si 0.933 3.067 18 H -0.280 1.280 19 H -0.273 1.273 20 H -0.318 1.318 21 C -0.155 4.155 22 H 0.096 0.904 23 H 0.054 0.946 24 H 0.052 0.948 25 H 0.127 0.873 26 H 0.071 0.929 27 H 0.065 0.935 28 H 0.075 0.925 29 H 0.336 0.664 30 H 0.313 0.687 31 H 0.263 0.737 32 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.918 -1.110 -7.888 16.912 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.231 6.231 3 C 0.086 3.914 4 C -0.239 4.239 5 C -0.044 4.044 6 C -0.172 4.172 7 C -0.093 4.093 8 Cl -0.033 7.033 9 C -0.019 4.019 10 C 0.104 3.896 11 H 0.082 0.918 12 N -0.371 5.371 13 C -0.546 4.546 14 H 0.090 0.910 15 C -0.119 4.119 16 N -0.535 5.535 17 Si 0.765 3.235 18 H -0.206 1.206 19 H -0.199 1.199 20 H -0.248 1.248 21 C -0.174 4.174 22 H 0.114 0.886 23 H 0.072 0.928 24 H 0.071 0.929 25 H 0.145 0.855 26 H 0.090 0.910 27 H 0.084 0.916 28 H 0.094 0.906 29 H 0.151 0.849 30 H 0.124 0.876 31 H 0.073 0.927 32 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -13.898 -0.838 -7.607 15.866 hybrid contribution -0.610 -0.155 -0.629 0.889 sum -14.508 -0.993 -8.236 16.712 Atomic orbital electron populations 1.22996 0.78962 1.03505 1.01176 1.86076 1.20937 1.27154 1.88928 1.18982 0.92238 0.83807 0.96323 1.20784 0.99359 0.91198 1.12607 1.19453 0.91907 0.95218 0.97850 1.20836 0.99069 0.94895 1.02440 1.20488 0.91319 0.87328 1.10143 1.98325 1.80612 1.27477 1.96898 1.21000 1.00191 0.89964 0.90742 1.18875 0.82390 0.90369 0.97933 0.91811 1.59363 1.66237 1.06494 1.05009 1.20558 0.92870 1.52007 0.89134 0.91037 1.24953 0.98544 0.92531 0.95903 1.69950 1.14853 1.49008 1.19680 0.85923 0.77974 0.77597 0.82042 1.20623 1.19859 1.24805 1.20153 0.90814 0.98263 1.08138 0.88557 0.92785 0.92919 0.85512 0.91010 0.91649 0.90586 0.84907 0.87593 0.92721 0.84874 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.28 9.81 101.05 0.99 1.28 16 2 O -0.32 -4.69 10.50 -19.51 -0.20 -4.89 16 3 C 0.13 2.18 6.69 -39.22 -0.26 1.92 16 4 C -0.22 -3.32 8.69 -39.44 -0.34 -3.66 16 5 C -0.04 -0.70 5.88 -104.61 -0.62 -1.32 16 6 C -0.12 -1.47 9.61 36.00 0.35 -1.12 16 7 C -0.07 -1.26 6.31 -39.49 -0.25 -1.51 16 8 Cl -0.06 -1.19 25.72 -51.86 -1.33 -2.52 16 9 C -0.02 -0.33 4.99 -104.61 -0.52 -0.85 16 10 C 0.21 4.95 1.85 -70.01 -0.13 4.82 16 11 H 0.06 1.56 6.17 -51.93 -0.32 1.24 16 12 N -0.84 -17.63 6.36 -6.65 -0.04 -17.68 16 13 C -0.51 -14.13 9.29 -34.44 -0.32 -14.45 16 14 H 0.07 2.21 7.98 -52.49 -0.42 1.79 16 15 C 0.08 2.47 5.47 -17.82 -0.10 2.37 16 16 N -0.90 -27.71 13.96 55.43 0.77 -26.93 16 17 Si 0.93 24.01 26.03 -169.99 -4.43 19.59 16 18 H -0.28 -7.18 7.11 56.52 0.40 -6.78 16 19 H -0.27 -6.84 6.54 56.52 0.37 -6.47 16 20 H -0.32 -8.30 7.11 56.52 0.40 -7.90 16 21 C -0.15 -2.88 9.21 -39.44 -0.36 -3.24 16 22 H 0.10 0.71 8.14 -51.93 -0.42 0.29 16 23 H 0.05 0.49 7.66 -51.93 -0.40 0.09 16 24 H 0.05 0.45 7.66 -51.93 -0.40 0.05 16 25 H 0.13 1.50 6.30 -52.49 -0.33 1.17 16 26 H 0.07 0.80 8.14 -51.93 -0.42 0.38 16 27 H 0.06 0.69 8.08 -51.93 -0.42 0.27 16 28 H 0.08 1.01 6.90 -51.93 -0.36 0.65 16 29 H 0.34 6.74 7.20 -39.29 -0.28 6.46 16 30 H 0.31 5.63 9.06 -39.30 -0.36 5.28 16 31 H 0.26 7.68 8.31 -40.82 -0.34 7.34 16 32 H 0.13 2.38 6.28 -52.49 -0.33 2.05 16 LS Contribution 279.02 15.07 4.20 4.20 Total: -1.00 -31.88 279.02 -6.22 -38.09 By element: Atomic # 1 Polarization: 9.54 SS G_CDS: -3.62 Total: 5.91 kcal Atomic # 6 Polarization: -14.21 SS G_CDS: -1.56 Total: -15.77 kcal Atomic # 7 Polarization: -45.34 SS G_CDS: 0.73 Total: -44.61 kcal Atomic # 8 Polarization: -4.69 SS G_CDS: -0.20 Total: -4.89 kcal Atomic # 14 Polarization: 24.01 SS G_CDS: -4.43 Total: 19.59 kcal Atomic # 17 Polarization: -1.19 SS G_CDS: -1.33 Total: -2.52 kcal Total LS contribution 4.20 Total: 4.20 kcal Total: -31.88 -6.22 -38.09 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260261068.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.968 kcal (2) G-P(sol) polarization free energy of solvation -31.878 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.910 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.216 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.094 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.126 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds