Wall clock time and date at job start Mon Mar 30 2020 06:38:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38180 * 119.96103 * 2 1 4 4 C 1.38722 * 119.96489 * 179.69707 * 3 2 1 5 5 O 1.35898 * 120.04771 * 180.29868 * 4 3 2 6 6 C 1.38732 * 119.90380 * 0.55348 * 4 3 2 7 7 C 1.50699 * 120.03578 * 179.71772 * 6 4 3 8 8 H 1.08994 * 109.47354 * 359.73082 * 7 6 4 9 9 C 1.50702 * 109.46662 * 119.72982 * 7 6 4 10 10 H 1.07999 * 120.00018 * 95.07950 * 9 7 6 11 11 C 1.37879 * 119.99902 * 275.07115 * 9 7 6 12 12 N 1.31518 * 119.99957 * 354.68623 * 11 9 7 13 13 Si 1.86802 * 119.99994 * 174.67983 * 11 9 7 14 14 H 1.48495 * 109.47072 * 90.00065 * 13 11 9 15 15 H 1.48499 * 109.47180 * 330.00229 * 13 11 9 16 16 H 1.48501 * 109.46985 * 210.00549 * 13 11 9 17 17 C 1.52999 * 109.47330 * 239.72867 * 7 6 4 18 18 N 1.46902 * 109.47009 * 65.42683 * 17 7 6 19 19 C 1.38242 * 119.92908 * 359.45070 * 6 4 3 20 20 Cl 1.73598 * 119.98455 * 180.29771 * 19 6 4 21 21 C 1.38213 * 119.96588 * 179.97438 * 2 1 3 22 22 H 1.08996 * 109.47272 * 270.02053 * 1 2 3 23 23 H 1.09003 * 109.47114 * 30.02203 * 1 2 3 24 24 H 1.09002 * 109.46518 * 150.01891 * 1 2 3 25 25 H 1.07995 * 120.01791 * 359.97438 * 3 2 1 26 26 H 0.96696 * 114.00071 * 270.25454 * 5 4 3 27 27 H 0.96996 * 119.99768 * 5.16520 * 12 11 9 28 28 H 1.08997 * 109.47194 * 185.42709 * 17 7 6 29 29 H 1.09001 * 109.47220 * 305.42718 * 17 7 6 30 30 H 1.00899 * 110.99504 * 180.02562 * 18 17 7 31 31 H 1.00894 * 110.99669 * 303.95138 * 18 17 7 32 32 H 1.07997 * 119.95695 * 0.02562 * 21 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1971 1.1971 0.0000 4 6 3.5843 1.1972 0.0064 5 8 4.2647 2.3736 0.0125 6 6 4.2761 -0.0053 0.0011 7 6 5.7831 -0.0086 0.0015 8 1 6.1487 1.0182 0.0015 9 6 6.2834 -0.7200 1.2323 10 1 6.5391 -1.7681 1.1837 11 6 6.4147 -0.0326 2.4203 12 7 6.2042 1.2651 2.4559 13 14 6.8916 -0.9446 3.9793 14 1 8.3706 -0.9592 4.1114 15 1 6.3870 -2.3395 3.9107 16 1 6.2962 -0.2601 5.1549 17 6 6.2919 -0.7312 -1.2474 18 7 5.9142 0.0334 -2.4435 19 6 3.5815 -1.2006 0.0010 20 17 4.4457 -2.7062 0.0022 21 6 2.1974 -1.1974 0.0005 22 1 -0.3633 0.0004 1.0276 23 1 -0.3633 0.8898 -0.5142 24 1 -0.3632 -0.8902 -0.5136 25 1 1.6568 2.1322 -0.0004 26 1 4.4622 2.7183 -0.8691 27 1 5.8841 1.7264 1.6649 28 1 7.3773 -0.8185 -1.1998 29 1 5.8492 -1.7260 -1.2973 30 1 6.2388 -0.4238 -3.2823 31 1 4.9170 0.1836 -2.4766 32 1 1.6561 -2.1319 0.0005 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260281166.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:38:17 Heat of formation + Delta-G solvation = -37.529350 kcal Electronic energy + Delta-G solvation = -17443.024064 eV Core-core repulsion = 14621.962105 eV Total energy + Delta-G solvation = -2821.061958 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -39.52748 -36.44920 -35.89578 -35.09545 -32.58178 -31.58981 -29.24009 -28.58858 -25.66745 -23.51625 -22.23715 -21.45040 -19.80144 -17.37362 -17.01002 -15.98163 -15.15295 -14.95005 -14.57643 -14.04241 -13.75655 -13.64215 -13.34375 -12.93611 -12.54332 -12.27926 -11.98934 -11.73809 -11.37911 -11.26563 -10.89400 -10.70730 -10.33870 -10.14862 -10.07523 -9.77042 -9.53654 -8.81001 -8.25790 -8.04733 -7.87526 -7.54229 -6.24742 -3.97979 1.70678 1.86268 2.92341 3.46441 3.51548 3.66450 4.09043 4.57667 4.80333 5.17972 5.31793 5.39641 5.47292 5.58433 5.65133 5.75177 5.91173 6.02169 6.25617 6.29399 6.40461 6.51822 6.80710 6.82082 6.92936 7.18281 7.35626 7.46137 7.79577 7.97653 8.26187 8.33187 8.56066 9.00247 9.73530 11.16845 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.017600 B = 0.009918 C = 0.009666 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1590.569647 B = 2822.356375 C = 2895.944199 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.103 4.103 2 C -0.097 4.097 3 C -0.146 4.146 4 C 0.111 3.889 5 O -0.479 6.479 6 C -0.053 4.053 7 C 0.065 3.935 8 H 0.060 0.940 9 C -0.585 4.585 10 H 0.058 0.942 11 C 0.025 3.975 12 N -0.903 5.903 13 Si 1.062 2.938 14 H -0.288 1.288 15 H -0.288 1.288 16 H -0.286 1.286 17 C 0.059 3.941 18 N -0.854 5.854 19 C -0.014 4.014 20 Cl -0.063 7.063 21 C -0.129 4.129 22 H 0.066 0.934 23 H 0.062 0.938 24 H 0.062 0.938 25 H 0.121 0.879 26 H 0.379 0.621 27 H 0.287 0.713 28 H 0.063 0.937 29 H 0.036 0.964 30 H 0.325 0.675 31 H 0.327 0.673 32 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.525 -3.138 -7.813 11.982 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.160 4.160 2 C -0.097 4.097 3 C -0.165 4.165 4 C 0.066 3.934 5 O -0.288 6.288 6 C -0.055 4.055 7 C 0.046 3.954 8 H 0.078 0.922 9 C -0.623 4.623 10 H 0.077 0.923 11 C -0.183 4.183 12 N -0.538 5.538 13 Si 0.891 3.109 14 H -0.215 1.215 15 H -0.214 1.214 16 H -0.212 1.212 17 C -0.071 4.071 18 N -0.381 5.381 19 C -0.040 4.040 20 Cl -0.034 7.034 21 C -0.148 4.148 22 H 0.084 0.916 23 H 0.081 0.919 24 H 0.081 0.919 25 H 0.139 0.861 26 H 0.234 0.766 27 H 0.101 0.899 28 H 0.082 0.918 29 H 0.054 0.946 30 H 0.135 0.865 31 H 0.138 0.862 32 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -7.643 -2.527 -5.269 9.621 hybrid contribution -0.886 -1.142 -2.153 2.593 sum -8.529 -3.670 -7.422 11.886 Atomic orbital electron populations 1.20664 0.91212 1.02119 1.01983 1.19363 0.95510 0.92113 1.02742 1.21242 0.93657 0.97796 1.03824 1.18123 0.88927 0.85395 1.00950 1.84935 1.76304 1.35251 1.32281 1.21100 1.00758 0.89799 0.93893 1.18023 0.84858 0.99209 0.93330 0.92207 1.21827 1.47570 0.98390 0.94529 0.92348 1.25724 0.94930 0.96145 1.01469 1.70627 1.40218 1.07936 1.35018 0.83658 0.76480 0.74960 0.75840 1.21480 1.21367 1.21158 1.22277 1.00109 0.95415 0.89284 1.58928 1.18928 1.55202 1.05060 1.20469 0.91076 0.87288 1.05210 1.98289 1.77289 1.31416 1.96427 1.20769 0.92100 0.97916 1.04016 0.91560 0.91900 0.91935 0.86122 0.76644 0.89948 0.91842 0.94567 0.86454 0.86207 0.86112 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.24 10.01 36.01 0.36 -0.88 16 2 C -0.10 -1.58 5.88 -104.65 -0.62 -2.19 16 3 C -0.15 -2.59 9.64 -39.42 -0.38 -2.97 16 4 C 0.11 2.28 6.66 -39.22 -0.26 2.02 16 5 O -0.48 -9.70 11.04 -19.42 -0.21 -9.92 16 6 C -0.05 -1.17 3.84 -104.44 -0.40 -1.58 16 7 C 0.07 1.56 1.76 -92.92 -0.16 1.40 16 8 H 0.06 1.60 5.56 -51.93 -0.29 1.31 16 9 C -0.59 -15.85 6.85 -34.44 -0.24 -16.09 16 10 H 0.06 1.58 6.86 -52.49 -0.36 1.22 16 11 C 0.02 0.71 5.45 -17.82 -0.10 0.61 16 12 N -0.90 -27.46 13.63 55.43 0.76 -26.70 16 13 Si 1.06 25.81 29.91 -169.99 -5.08 20.72 16 14 H -0.29 -6.73 7.11 56.52 0.40 -6.33 16 15 H -0.29 -6.71 7.11 56.52 0.40 -6.31 16 16 H -0.29 -7.00 7.11 56.52 0.40 -6.60 16 17 C 0.06 1.22 6.01 -3.82 -0.02 1.20 16 18 N -0.85 -14.82 9.62 -10.37 -0.10 -14.92 16 19 C -0.01 -0.28 6.02 -39.52 -0.24 -0.52 16 20 Cl -0.06 -1.26 23.24 -51.86 -1.21 -2.46 16 21 C -0.13 -2.28 9.48 -39.53 -0.37 -2.65 16 22 H 0.07 0.77 8.14 -51.93 -0.42 0.35 16 23 H 0.06 0.66 8.08 -51.93 -0.42 0.24 16 24 H 0.06 0.66 8.08 -51.93 -0.42 0.24 16 25 H 0.12 1.86 8.06 -52.49 -0.42 1.44 16 26 H 0.38 5.81 9.06 45.56 0.41 6.23 16 27 H 0.29 8.62 5.35 -40.82 -0.22 8.41 16 28 H 0.06 1.39 8.14 -51.93 -0.42 0.96 16 29 H 0.04 0.74 4.88 -51.93 -0.25 0.48 16 30 H 0.33 4.79 9.08 -39.29 -0.36 4.44 16 31 H 0.33 5.48 8.09 -39.30 -0.32 5.16 16 32 H 0.12 1.84 8.06 -52.49 -0.42 1.42 16 LS Contribution 277.81 15.07 4.19 4.19 Total: -1.00 -31.29 277.81 -6.80 -38.09 By element: Atomic # 1 Polarization: 15.36 SS G_CDS: -2.71 Total: 12.66 kcal Atomic # 6 Polarization: -19.22 SS G_CDS: -2.43 Total: -21.65 kcal Atomic # 7 Polarization: -42.28 SS G_CDS: 0.66 Total: -41.62 kcal Atomic # 8 Polarization: -9.70 SS G_CDS: -0.21 Total: -9.92 kcal Atomic # 14 Polarization: 25.81 SS G_CDS: -5.08 Total: 20.72 kcal Atomic # 17 Polarization: -1.26 SS G_CDS: -1.21 Total: -2.46 kcal Total LS contribution 4.19 Total: 4.19 kcal Total: -31.29 -6.80 -38.09 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260281166.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.560 kcal (2) G-P(sol) polarization free energy of solvation -31.291 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.731 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.799 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.089 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.529 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds