Wall clock time and date at job start Mon Mar 30 2020 06:38:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50692 * 1 3 3 C 1.38731 * 120.03883 * 2 1 4 4 O 1.35905 * 120.04526 * 0.04738 * 3 2 1 5 5 C 1.38717 * 119.90295 * 180.02562 * 3 2 1 6 6 C 1.38173 * 119.97333 * 359.72471 * 5 3 2 7 7 C 1.50699 * 119.96766 * 180.27371 * 6 5 3 8 8 H 1.09004 * 109.47105 * 0.27622 * 7 6 5 9 9 C 1.50701 * 109.47089 * 240.27889 * 7 6 5 10 10 H 1.08007 * 120.00066 * 354.55141 * 9 7 6 11 11 C 1.37872 * 119.99986 * 174.55767 * 9 7 6 12 12 N 1.31509 * 120.00157 * 350.56844 * 11 9 7 13 13 Si 1.86800 * 119.99954 * 170.56744 * 11 9 7 14 14 H 1.48496 * 109.47018 * 89.99983 * 13 11 9 15 15 H 1.48500 * 109.47231 * 210.00041 * 13 11 9 16 16 H 1.48502 * 109.47285 * 330.00279 * 13 11 9 17 17 C 1.52999 * 109.46907 * 120.27580 * 7 6 5 18 18 N 1.46896 * 109.47396 * 296.84148 * 17 7 6 19 19 C 1.38222 * 120.06569 * 0.55294 * 6 5 3 20 20 C 1.38240 * 120.03178 * 180.02562 * 2 1 3 21 21 Cl 1.73601 * 119.98691 * 0.02562 * 20 2 1 22 22 H 1.09003 * 109.47643 * 269.97933 * 1 2 3 23 23 H 1.08997 * 109.47134 * 29.97797 * 1 2 3 24 24 H 1.08998 * 109.47579 * 149.97760 * 1 2 3 25 25 H 0.96691 * 114.00047 * 89.99908 * 4 3 2 26 26 H 1.08010 * 120.00930 * 180.02562 * 5 3 2 27 27 H 0.97004 * 120.00372 * 180.02562 * 12 11 9 28 28 H 1.09000 * 109.46688 * 56.84479 * 17 7 6 29 29 H 1.09002 * 109.46542 * 176.84248 * 17 7 6 30 30 H 1.00899 * 111.00388 * 184.52270 * 18 17 7 31 31 H 1.00900 * 111.00012 * 308.47899 * 18 17 7 32 32 H 1.07997 * 119.95208 * 179.72676 * 19 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2014 1.2010 0.0000 4 8 1.5236 2.3789 0.0010 5 6 3.5886 1.1977 -0.0005 6 6 4.2760 -0.0009 0.0047 7 6 5.7830 -0.0043 0.0103 8 1 6.1487 1.0226 0.0144 9 6 6.2884 -0.7125 -1.2201 10 1 5.5919 -1.1959 -1.8894 11 6 7.6398 -0.7436 -1.4915 12 7 8.4691 -0.0052 -0.7870 13 14 8.2927 -1.8348 -2.8599 14 1 8.3066 -1.0744 -4.1353 15 1 9.6729 -2.2714 -2.5289 16 1 7.4177 -3.0260 -3.0034 17 6 6.2866 -0.7299 1.2596 18 7 5.8574 0.0030 2.4581 19 6 3.5829 -1.1968 -0.0011 20 6 2.1988 -1.1968 -0.0005 21 17 1.3313 -2.7005 -0.0019 22 1 -0.3634 -0.0004 1.0277 23 1 -0.3633 0.8902 -0.5135 24 1 -0.3634 -0.8897 -0.5142 25 1 1.3281 2.7195 0.8846 26 1 4.1310 2.1317 -0.0001 27 1 9.4199 -0.0268 -0.9782 28 1 5.8754 -1.7391 1.2841 29 1 7.3752 -0.7816 1.2356 30 1 6.2392 -0.4147 3.2935 31 1 6.1079 0.9783 2.3946 32 1 4.1222 -2.1325 -0.0015 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260295487.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:38:19 Heat of formation + Delta-G solvation = -43.527373 kcal Electronic energy + Delta-G solvation = -16763.199655 eV Core-core repulsion = 13941.877603 eV Total energy + Delta-G solvation = -2821.322052 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -39.54445 -36.89962 -36.22718 -34.67039 -32.30704 -32.07112 -29.30507 -28.80090 -25.58447 -23.81179 -22.29871 -21.49840 -19.85084 -17.44987 -16.64444 -15.66604 -15.60740 -14.81000 -14.72212 -14.35609 -14.00848 -13.49963 -13.34143 -12.66408 -12.30447 -12.19660 -12.08392 -11.84687 -11.56710 -11.18810 -11.01778 -10.82863 -10.61063 -10.46895 -10.35733 -10.03394 -9.56497 -9.40611 -8.52703 -8.05676 -7.81240 -7.70747 -6.19094 -4.21726 1.71950 1.82835 2.54299 3.23536 3.30981 3.35767 4.11258 4.34268 4.64712 5.12574 5.21649 5.33591 5.59464 5.69718 5.82189 6.00722 6.05096 6.09429 6.16415 6.48318 6.59816 6.77835 6.80525 6.86872 7.11072 7.23522 7.36454 7.72368 7.79446 7.91875 7.98656 8.20475 8.29223 8.82286 9.42806 10.89115 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.020964 B = 0.007006 C = 0.006325 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1335.324058 B = 3995.403972 C = 4425.778199 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.106 4.106 2 C -0.135 4.135 3 C 0.107 3.893 4 O -0.496 6.496 5 C -0.140 4.140 6 C 0.013 3.987 7 C 0.080 3.920 8 H 0.044 0.956 9 C -0.515 4.515 10 H 0.062 0.938 11 C 0.067 3.933 12 N -0.887 5.887 13 Si 0.891 3.109 14 H -0.279 1.279 15 H -0.285 1.285 16 H -0.271 1.271 17 C 0.071 3.929 18 N -0.857 5.857 19 C -0.103 4.103 20 C -0.021 4.021 21 Cl -0.087 7.087 22 H 0.063 0.937 23 H 0.068 0.932 24 H 0.066 0.934 25 H 0.383 0.617 26 H 0.125 0.875 27 H 0.263 0.737 28 H 0.049 0.951 29 H 0.047 0.953 30 H 0.322 0.678 31 H 0.331 0.669 32 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.448 0.365 4.730 11.474 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C -0.136 4.136 3 C 0.063 3.937 4 O -0.305 6.305 5 C -0.158 4.158 6 C 0.012 3.988 7 C 0.062 3.938 8 H 0.062 0.938 9 C -0.553 4.553 10 H 0.080 0.920 11 C -0.136 4.136 12 N -0.525 5.525 13 Si 0.718 3.282 14 H -0.205 1.205 15 H -0.211 1.211 16 H -0.196 1.196 17 C -0.059 4.059 18 N -0.384 5.384 19 C -0.121 4.121 20 C -0.048 4.048 21 Cl -0.058 7.058 22 H 0.082 0.918 23 H 0.087 0.913 24 H 0.085 0.915 25 H 0.237 0.763 26 H 0.143 0.857 27 H 0.072 0.928 28 H 0.068 0.932 29 H 0.065 0.935 30 H 0.131 0.869 31 H 0.142 0.858 32 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -11.042 -0.008 3.899 11.710 hybrid contribution 1.463 -0.447 -0.100 1.533 sum -9.579 -0.455 3.799 10.315 Atomic orbital electron populations 1.20615 0.90875 1.02916 1.01858 1.19687 0.96395 0.91150 1.06370 1.18003 0.89616 0.83936 1.02178 1.84786 1.76730 1.36048 1.32983 1.21399 0.92531 0.99142 1.02743 1.20192 0.98252 0.90393 0.89950 1.17927 0.84362 0.98054 0.93506 0.93838 1.21053 0.92054 1.34862 1.07366 0.92014 1.24959 0.97005 0.95200 0.96401 1.69944 1.03531 1.38065 1.40961 0.86596 0.78232 0.81253 0.82091 1.20542 1.21104 1.19577 1.21968 0.99036 0.96280 0.88585 1.59030 1.67732 1.06630 1.04991 1.20924 0.90598 0.99881 1.00723 1.20573 0.92197 0.85353 1.06666 1.98306 1.77282 1.33112 1.97111 0.91843 0.91268 0.91477 0.76270 0.85713 0.92765 0.93203 0.93480 0.86857 0.85825 0.85076 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.43 9.39 36.00 0.34 -1.10 16 2 C -0.13 -2.26 5.90 -104.44 -0.62 -2.88 16 3 C 0.11 1.84 6.68 -39.22 -0.26 1.58 16 4 O -0.50 -7.21 12.55 -19.44 -0.24 -7.45 16 5 C -0.14 -2.67 9.61 -39.43 -0.38 -3.05 16 6 C 0.01 0.26 4.43 -104.65 -0.46 -0.20 16 7 C 0.08 1.87 1.92 -92.92 -0.18 1.69 16 8 H 0.04 1.10 7.82 -51.93 -0.41 0.70 16 9 C -0.52 -13.38 8.19 -34.44 -0.28 -13.66 16 10 H 0.06 1.62 7.55 -52.48 -0.40 1.23 16 11 C 0.07 1.76 5.18 -17.82 -0.09 1.67 16 12 N -0.89 -24.06 12.15 55.43 0.67 -23.39 16 13 Si 0.89 20.58 29.55 -169.99 -5.02 15.56 16 14 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 15 H -0.29 -6.54 7.11 56.52 0.40 -6.14 16 16 H -0.27 -6.21 7.11 56.52 0.40 -5.81 16 17 C 0.07 1.55 5.95 -3.83 -0.02 1.53 16 18 N -0.86 -15.61 9.32 -10.37 -0.10 -15.71 16 19 C -0.10 -2.05 8.40 -39.52 -0.33 -2.38 16 20 C -0.02 -0.38 6.31 -39.52 -0.25 -0.63 16 21 Cl -0.09 -1.36 27.29 -51.86 -1.42 -2.78 16 22 H 0.06 0.76 8.14 -51.93 -0.42 0.34 16 23 H 0.07 0.89 7.53 -51.93 -0.39 0.50 16 24 H 0.07 0.88 6.90 -51.93 -0.36 0.53 16 25 H 0.38 3.67 9.06 45.56 0.41 4.08 16 26 H 0.12 2.30 7.94 -52.48 -0.42 1.89 16 27 H 0.26 6.84 8.31 -40.82 -0.34 6.50 16 28 H 0.05 1.09 7.28 -51.93 -0.38 0.71 16 29 H 0.05 1.14 6.83 -51.93 -0.35 0.78 16 30 H 0.32 5.14 9.08 -39.29 -0.36 4.79 16 31 H 0.33 5.86 8.93 -39.29 -0.35 5.51 16 32 H 0.13 2.67 7.55 -52.49 -0.40 2.27 16 LS Contribution 287.06 15.07 4.33 4.33 Total: -1.00 -27.80 287.06 -7.27 -35.07 By element: Atomic # 1 Polarization: 14.75 SS G_CDS: -2.95 Total: 11.80 kcal Atomic # 6 Polarization: -14.89 SS G_CDS: -2.54 Total: -17.42 kcal Atomic # 7 Polarization: -39.67 SS G_CDS: 0.58 Total: -39.09 kcal Atomic # 8 Polarization: -7.21 SS G_CDS: -0.24 Total: -7.45 kcal Atomic # 14 Polarization: 20.58 SS G_CDS: -5.02 Total: 15.56 kcal Atomic # 17 Polarization: -1.36 SS G_CDS: -1.42 Total: -2.78 kcal Total LS contribution 4.33 Total: 4.33 kcal Total: -27.80 -7.27 -35.07 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260295487.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.458 kcal (2) G-P(sol) polarization free energy of solvation -27.802 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.260 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.267 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.069 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.527 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds