Wall clock time and date at job start Mon Mar 30 2020 06:38:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.38725 * 120.03568 * 2 1 4 4 O 1.35896 * 120.05041 * 359.97438 * 3 2 1 5 5 C 1.38725 * 119.90152 * 179.97438 * 3 2 1 6 6 C 1.38170 * 119.97453 * 359.97438 * 5 3 2 7 7 C 1.50698 * 119.96862 * 180.02562 * 6 5 3 8 8 H 1.08998 * 109.47083 * 359.97438 * 7 6 5 9 9 C 1.50697 * 109.46993 * 119.99852 * 7 6 5 10 10 H 1.07991 * 120.00449 * 359.72131 * 9 7 6 11 11 C 1.37885 * 119.99686 * 179.97438 * 9 7 6 12 12 N 1.31516 * 119.99913 * 359.72095 * 11 9 7 13 13 Si 1.86798 * 119.99766 * 179.72528 * 11 9 7 14 14 H 1.48493 * 109.47326 * 90.00142 * 13 11 9 15 15 H 1.48506 * 109.46545 * 209.99892 * 13 11 9 16 16 H 1.48498 * 109.47210 * 329.99603 * 13 11 9 17 17 C 1.53006 * 109.46561 * 239.99651 * 7 6 5 18 18 N 1.46896 * 109.47066 * 65.00203 * 17 7 6 19 19 C 1.38231 * 120.06206 * 0.27117 * 6 5 3 20 20 C 1.38246 * 120.03281 * 179.97438 * 2 1 3 21 21 Cl 1.73600 * 119.98491 * 0.02562 * 20 2 1 22 22 H 1.09003 * 109.46996 * 90.00205 * 1 2 3 23 23 H 1.08998 * 109.47470 * 210.00241 * 1 2 3 24 24 H 1.08996 * 109.47102 * 330.00347 * 1 2 3 25 25 H 0.96704 * 114.00108 * 269.98177 * 4 3 2 26 26 H 1.08008 * 120.01367 * 180.02562 * 5 3 2 27 27 H 0.97000 * 119.99651 * 180.02562 * 12 11 9 28 28 H 1.09002 * 109.46686 * 184.99687 * 17 7 6 29 29 H 1.09000 * 109.47280 * 304.99843 * 17 7 6 30 30 H 1.00900 * 110.99907 * 56.04362 * 18 17 7 31 31 H 1.00901 * 111.00006 * 179.97438 * 18 17 7 32 32 H 1.08002 * 119.94443 * 179.73375 * 19 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2013 1.2010 0.0000 4 8 1.5236 2.3789 -0.0005 5 6 3.5886 1.1977 0.0005 6 6 4.2761 -0.0008 0.0016 7 6 5.7831 -0.0042 0.0028 8 1 6.1487 1.0227 0.0021 9 6 6.2828 -0.7151 1.2339 10 1 5.5797 -1.1197 1.9468 11 6 7.6380 -0.8445 1.4530 12 7 8.4944 -0.3522 0.5846 13 14 8.2575 -1.7190 2.9829 14 1 8.4177 -3.1669 2.6948 15 1 9.5676 -1.1461 3.3841 16 1 7.2799 -1.5389 4.0861 17 6 6.2923 -0.7272 -1.2458 18 7 5.9063 0.0317 -2.4428 19 6 3.5829 -1.1967 -0.0035 20 6 2.1989 -1.1968 0.0005 21 17 1.3314 -2.7005 0.0005 22 1 -0.3633 0.0000 -1.0277 23 1 -0.3634 -0.8899 0.5138 24 1 -0.3633 0.8900 0.5138 25 1 1.3281 2.7198 -0.8841 26 1 4.1310 2.1317 0.0010 27 1 9.4477 -0.4435 0.7385 28 1 7.3784 -0.8078 -1.2013 29 1 5.8555 -1.7248 -1.2915 30 1 6.2452 0.9809 -2.3940 31 1 6.2317 -0.4255 -3.2814 32 1 4.1223 -2.1324 -0.0070 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260295490.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:38:22 Heat of formation + Delta-G solvation = -42.154195 kcal Electronic energy + Delta-G solvation = -16770.002092 eV Core-core repulsion = 13948.739585 eV Total energy + Delta-G solvation = -2821.262507 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -39.54022 -36.89368 -36.21911 -34.66844 -32.26330 -32.05364 -29.30068 -28.78490 -25.56320 -23.81687 -22.29130 -21.44914 -19.81818 -17.45007 -16.62081 -15.67622 -15.59949 -14.80984 -14.70191 -14.38116 -14.01046 -13.43210 -13.33745 -12.62166 -12.29852 -12.18193 -12.03335 -11.77818 -11.55570 -11.17423 -11.04622 -10.82631 -10.58921 -10.46714 -10.34269 -10.02002 -9.58653 -9.33576 -8.57335 -8.05516 -7.81668 -7.61751 -6.14857 -4.23066 1.72219 1.83127 2.54575 3.23490 3.30745 3.35395 4.11591 4.33724 4.64893 5.13662 5.21715 5.33745 5.64562 5.71837 5.82382 6.00787 6.05735 6.10244 6.17313 6.49759 6.63562 6.80335 6.87007 6.90363 7.12457 7.28972 7.44740 7.73709 7.84105 7.94561 8.00886 8.26403 8.34075 8.81403 9.42546 10.88898 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.020909 B = 0.006980 C = 0.006350 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1338.832586 B = 4010.272225 C = 4408.460579 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.106 4.106 2 C -0.135 4.135 3 C 0.107 3.893 4 O -0.496 6.496 5 C -0.140 4.140 6 C 0.012 3.988 7 C 0.083 3.917 8 H 0.037 0.963 9 C -0.512 4.512 10 H 0.061 0.939 11 C 0.064 3.936 12 N -0.890 5.890 13 Si 0.895 3.105 14 H -0.279 1.279 15 H -0.286 1.286 16 H -0.272 1.272 17 C 0.063 3.937 18 N -0.858 5.858 19 C -0.102 4.102 20 C -0.022 4.022 21 Cl -0.087 7.087 22 H 0.063 0.937 23 H 0.066 0.934 24 H 0.068 0.932 25 H 0.383 0.617 26 H 0.125 0.875 27 H 0.262 0.738 28 H 0.070 0.930 29 H 0.045 0.955 30 H 0.329 0.671 31 H 0.321 0.679 32 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.356 0.872 -4.295 11.245 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C -0.136 4.136 3 C 0.062 3.938 4 O -0.306 6.306 5 C -0.158 4.158 6 C 0.012 3.988 7 C 0.064 3.936 8 H 0.055 0.945 9 C -0.550 4.550 10 H 0.080 0.920 11 C -0.138 4.138 12 N -0.529 5.529 13 Si 0.723 3.277 14 H -0.205 1.205 15 H -0.211 1.211 16 H -0.197 1.197 17 C -0.067 4.067 18 N -0.385 5.385 19 C -0.121 4.121 20 C -0.048 4.048 21 Cl -0.058 7.058 22 H 0.082 0.918 23 H 0.085 0.915 24 H 0.087 0.913 25 H 0.237 0.763 26 H 0.143 0.857 27 H 0.072 0.928 28 H 0.088 0.912 29 H 0.064 0.936 30 H 0.140 0.860 31 H 0.130 0.870 32 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -10.961 0.547 -3.450 11.504 hybrid contribution 1.407 -0.446 0.133 1.482 sum -9.555 0.101 -3.317 10.115 Atomic orbital electron populations 1.20615 0.90874 1.02910 1.01856 1.19688 0.96396 0.91150 1.06395 1.18004 0.89618 0.83937 1.02200 1.84786 1.76736 1.36042 1.32990 1.21399 0.92518 0.99134 1.02768 1.20221 0.98340 0.90376 0.89879 1.17909 0.84261 0.97638 0.93779 0.94525 1.21108 0.91668 1.36701 1.05540 0.92031 1.24971 0.96802 0.95317 0.96694 1.69856 1.02197 1.45489 1.35342 0.86524 0.78259 0.79734 0.83201 1.20512 1.21141 1.19685 1.22059 1.01228 0.95391 0.88051 1.59038 1.68218 1.06243 1.05021 1.20931 0.90584 0.99909 1.00693 1.20574 0.92201 0.85356 1.06686 1.98306 1.77277 1.33110 1.97111 0.91843 0.91477 0.91275 0.76271 0.85748 0.92776 0.91237 0.93639 0.86019 0.86969 0.85043 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.44 9.39 36.00 0.34 -1.10 16 2 C -0.13 -2.28 5.90 -104.44 -0.62 -2.89 16 3 C 0.11 1.84 6.68 -39.22 -0.26 1.58 16 4 O -0.50 -7.22 12.55 -19.41 -0.24 -7.47 16 5 C -0.14 -2.68 9.61 -39.43 -0.38 -3.06 16 6 C 0.01 0.26 4.46 -104.65 -0.47 -0.21 16 7 C 0.08 1.94 2.10 -92.92 -0.19 1.75 16 8 H 0.04 0.93 7.87 -51.93 -0.41 0.52 16 9 C -0.51 -13.30 8.24 -34.44 -0.28 -13.59 16 10 H 0.06 1.62 7.61 -52.49 -0.40 1.22 16 11 C 0.06 1.68 5.30 -17.82 -0.09 1.58 16 12 N -0.89 -23.90 11.28 55.43 0.63 -23.27 16 13 Si 0.90 20.61 29.54 -169.99 -5.02 15.59 16 14 H -0.28 -6.37 7.11 56.52 0.40 -5.97 16 15 H -0.29 -6.55 7.11 56.52 0.40 -6.15 16 16 H -0.27 -6.28 7.11 56.52 0.40 -5.87 16 17 C 0.06 1.38 5.91 -3.82 -0.02 1.36 16 18 N -0.86 -15.97 9.34 -10.37 -0.10 -16.06 16 19 C -0.10 -2.06 8.44 -39.52 -0.33 -2.39 16 20 C -0.02 -0.39 6.31 -39.52 -0.25 -0.64 16 21 Cl -0.09 -1.37 27.29 -51.86 -1.42 -2.78 16 22 H 0.06 0.76 8.14 -51.93 -0.42 0.34 16 23 H 0.07 0.89 6.90 -51.93 -0.36 0.53 16 24 H 0.07 0.89 7.53 -51.93 -0.39 0.50 16 25 H 0.38 3.69 9.06 45.56 0.41 4.10 16 26 H 0.12 2.30 7.94 -52.48 -0.42 1.88 16 27 H 0.26 6.77 8.31 -40.82 -0.34 6.43 16 28 H 0.07 1.72 5.94 -51.93 -0.31 1.41 16 29 H 0.05 1.02 7.21 -51.93 -0.37 0.64 16 30 H 0.33 5.93 8.99 -39.29 -0.35 5.58 16 31 H 0.32 5.27 9.08 -39.29 -0.36 4.91 16 32 H 0.13 2.70 7.53 -52.49 -0.40 2.31 16 LS Contribution 285.77 15.07 4.31 4.31 Total: -1.00 -27.59 285.77 -7.32 -34.91 By element: Atomic # 1 Polarization: 15.29 SS G_CDS: -2.91 Total: 12.38 kcal Atomic # 6 Polarization: -15.04 SS G_CDS: -2.56 Total: -17.60 kcal Atomic # 7 Polarization: -39.86 SS G_CDS: 0.53 Total: -39.33 kcal Atomic # 8 Polarization: -7.22 SS G_CDS: -0.24 Total: -7.47 kcal Atomic # 14 Polarization: 20.61 SS G_CDS: -5.02 Total: 15.59 kcal Atomic # 17 Polarization: -1.37 SS G_CDS: -1.42 Total: -2.78 kcal Total LS contribution 4.31 Total: 4.31 kcal Total: -27.59 -7.32 -34.91 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260295490.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.246 kcal (2) G-P(sol) polarization free energy of solvation -27.593 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.839 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.315 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.909 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.154 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds