Wall clock time and date at job start Mon Mar 30 2020 06:35:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.38386 * 119.97828 * 2 1 4 4 Cl 1.73599 * 119.95633 * 0.02562 * 3 2 1 5 5 C 1.38348 * 120.08620 * 180.25587 * 3 2 1 6 6 C 1.38157 * 120.04090 * 359.74758 * 5 3 2 7 7 C 1.38698 * 119.95854 * 359.97438 * 6 5 3 8 8 O 1.35925 * 120.04276 * 179.97438 * 7 6 5 9 9 C 1.38126 * 119.97937 * 179.75184 * 2 1 3 10 10 C 1.50692 * 120.02319 * 0.02562 * 9 2 1 11 11 H 1.09007 * 109.47207 * 354.67344 * 10 9 2 12 12 C 1.50693 * 109.47376 * 234.67108 * 10 9 2 13 13 H 1.07998 * 120.00267 * 354.52948 * 12 10 9 14 14 C 1.37881 * 120.00071 * 174.53247 * 12 10 9 15 15 N 1.31512 * 120.00096 * 355.69091 * 14 12 10 16 16 Si 1.86799 * 120.00096 * 175.68871 * 14 12 10 17 17 H 1.48501 * 109.46890 * 60.00184 * 16 14 12 18 18 H 1.48503 * 109.47262 * 179.97438 * 16 14 12 19 19 H 1.48490 * 109.47435 * 300.00009 * 16 14 12 20 20 C 1.53005 * 109.47004 * 114.67045 * 10 9 2 21 21 N 1.46907 * 109.47038 * 296.67084 * 20 10 9 22 22 H 1.09001 * 109.47109 * 263.70200 * 1 2 3 23 23 H 1.09000 * 109.47451 * 23.71237 * 1 2 3 24 24 H 1.09007 * 109.47136 * 143.70868 * 1 2 3 25 25 H 1.08000 * 119.97868 * 179.72758 * 5 3 2 26 26 H 1.08003 * 120.02172 * 180.02562 * 6 5 3 27 27 H 0.96699 * 114.00573 * 270.02276 * 8 7 6 28 28 H 0.96999 * 120.00210 * 180.02562 * 15 14 12 29 29 H 1.09002 * 109.46998 * 176.67234 * 20 10 9 30 30 H 1.08992 * 109.46969 * 56.66843 * 20 10 9 31 31 H 1.00897 * 110.99982 * 174.36858 * 21 20 10 32 32 H 1.00901 * 110.99873 * 298.32296 * 21 20 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1984 1.1987 0.0000 4 17 1.3287 2.7011 0.0007 5 6 3.5819 1.2013 -0.0053 6 6 4.2758 0.0067 -0.0054 7 6 3.5846 -1.1958 0.0004 8 8 4.2655 -2.3722 -0.0002 9 6 2.1972 -1.1964 0.0052 10 6 1.4438 -2.5015 0.0103 11 1 0.3758 -2.3042 0.1044 12 6 1.9037 -3.3426 1.1730 13 1 2.7257 -3.0091 1.7890 14 6 1.2750 -4.5380 1.4504 15 7 0.2211 -4.9038 0.7541 16 14 1.9205 -5.6379 2.8153 17 1 1.8786 -4.9028 4.1049 18 1 1.0748 -6.8548 2.9121 19 1 3.3206 -6.0303 2.5145 20 6 1.7108 -3.2496 -1.2975 21 7 1.1904 -2.4652 -2.4253 22 1 -0.3633 -0.1127 1.0215 23 1 -0.3634 0.9409 -0.4133 24 1 -0.3634 -0.8284 -0.6083 25 1 4.1198 2.1378 -0.0098 26 1 5.3558 0.0091 -0.0092 27 1 4.4588 -2.7144 -0.8837 28 1 -0.2214 -5.7446 0.9496 29 1 1.2138 -4.2193 -1.2693 30 1 2.7840 -3.3947 -1.4204 31 1 1.4347 -2.8924 -3.3061 32 1 0.1921 -2.3401 -2.3487 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260362912.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:35:41 Heat of formation + Delta-G solvation = -34.830836 kcal Electronic energy + Delta-G solvation = -17293.169189 eV Core-core repulsion = 14472.224247 eV Total energy + Delta-G solvation = -2820.944942 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -39.53850 -36.66935 -35.55361 -35.01470 -32.22177 -31.97895 -29.82879 -27.38727 -26.18316 -23.93405 -22.21042 -21.02081 -19.59810 -17.23111 -16.70265 -16.05346 -15.32782 -14.70835 -14.53958 -14.32968 -13.61404 -13.26097 -13.04337 -12.51444 -12.47095 -12.00993 -11.87835 -11.73284 -11.45883 -11.18378 -10.91447 -10.68385 -10.60407 -10.46499 -10.15619 -9.93024 -9.41738 -9.08062 -8.41091 -7.95656 -7.77748 -7.63784 -6.06609 -4.06675 1.71242 1.95047 2.60425 3.32548 3.36062 3.41434 4.13703 4.44579 4.93270 5.23892 5.34108 5.35598 5.61927 5.82523 5.91224 6.07897 6.18279 6.27613 6.44036 6.57672 6.67742 6.71614 6.91071 6.96748 7.08648 7.28125 7.44303 7.77904 7.92923 7.96291 8.21640 8.37180 8.45984 8.98123 9.55898 11.01604 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.024398 B = 0.007421 C = 0.007134 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1147.351864 B = 3771.952610 C = 3924.164972 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.064 4.064 3 C -0.047 4.047 4 Cl -0.092 7.092 5 C -0.121 4.121 6 C -0.151 4.151 7 C 0.119 3.881 8 O -0.476 6.476 9 C -0.026 4.026 10 C 0.084 3.916 11 H 0.049 0.951 12 C -0.490 4.490 13 H 0.063 0.937 14 C 0.060 3.940 15 N -0.897 5.897 16 Si 0.893 3.107 17 H -0.278 1.278 18 H -0.290 1.290 19 H -0.276 1.276 20 C 0.069 3.931 21 N -0.858 5.858 22 H 0.069 0.931 23 H 0.061 0.939 24 H 0.078 0.922 25 H 0.123 0.877 26 H 0.124 0.876 27 H 0.376 0.624 28 H 0.260 0.740 29 H 0.053 0.947 30 H 0.045 0.955 31 H 0.320 0.680 32 H 0.331 0.669 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.094 8.320 -4.700 10.044 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.064 4.064 3 C -0.073 4.073 4 Cl -0.063 7.063 5 C -0.140 4.140 6 C -0.170 4.170 7 C 0.074 3.926 8 O -0.285 6.285 9 C -0.027 4.027 10 C 0.066 3.934 11 H 0.067 0.933 12 C -0.529 4.529 13 H 0.082 0.918 14 C -0.141 4.141 15 N -0.536 5.536 16 Si 0.722 3.278 17 H -0.203 1.203 18 H -0.215 1.215 19 H -0.202 1.202 20 C -0.061 4.061 21 N -0.385 5.385 22 H 0.087 0.913 23 H 0.080 0.920 24 H 0.096 0.904 25 H 0.141 0.859 26 H 0.142 0.858 27 H 0.232 0.768 28 H 0.070 0.930 29 H 0.072 0.928 30 H 0.063 0.937 31 H 0.130 0.870 32 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges 3.335 8.934 -3.807 10.268 hybrid contribution -0.138 -1.469 0.023 1.475 sum 3.198 7.465 -3.784 8.959 Atomic orbital electron populations 1.20824 0.90867 1.02542 1.02617 1.19472 0.96552 0.90381 1.00043 1.20695 0.91983 0.85737 1.08870 1.98296 1.77386 1.33379 1.97246 1.20539 0.91713 0.98009 1.03771 1.21214 0.99762 0.91704 1.04299 1.18328 0.89825 0.84976 0.99449 1.84947 1.75624 1.35934 1.32025 1.20608 0.92900 0.96189 0.92963 1.17891 0.95814 0.86731 0.92989 0.93317 1.21058 1.16214 1.03854 1.11736 0.91842 1.24947 0.94693 0.97973 0.96492 1.69906 1.19702 1.22943 1.41091 0.86624 0.78907 0.79818 0.82499 1.20343 1.21537 1.20180 1.21969 0.97733 0.96603 0.89787 1.59063 1.18402 1.56111 1.04943 0.91254 0.92010 0.90360 0.85948 0.85846 0.76814 0.93009 0.92844 0.93664 0.87041 0.85828 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.99 8.82 36.00 0.32 -1.67 16 2 C -0.06 -1.23 5.88 -104.61 -0.62 -1.84 16 3 C -0.05 -0.81 6.31 -39.49 -0.25 -1.06 16 4 Cl -0.09 -1.39 27.18 -51.86 -1.41 -2.80 16 5 C -0.12 -1.98 9.82 -39.57 -0.39 -2.37 16 6 C -0.15 -2.57 9.99 -39.44 -0.39 -2.97 16 7 C 0.12 2.35 6.10 -39.22 -0.24 2.11 16 8 O -0.48 -9.26 10.75 -19.50 -0.21 -9.47 16 9 C -0.03 -0.54 4.45 -104.48 -0.47 -1.01 16 10 C 0.08 1.96 1.66 -92.93 -0.15 1.81 16 11 H 0.05 1.22 5.71 -51.92 -0.30 0.93 16 12 C -0.49 -12.91 7.38 -34.44 -0.25 -13.16 16 13 H 0.06 1.75 6.94 -52.49 -0.36 1.39 16 14 C 0.06 1.59 5.26 -17.82 -0.09 1.50 16 15 N -0.90 -24.48 11.91 55.43 0.66 -23.82 16 16 Si 0.89 21.23 29.54 -169.99 -5.02 16.21 16 17 H -0.28 -6.64 7.11 56.52 0.40 -6.23 16 18 H -0.29 -6.82 7.11 56.52 0.40 -6.42 16 19 H -0.28 -6.55 7.11 56.52 0.40 -6.15 16 20 C 0.07 1.47 5.92 -3.82 -0.02 1.45 16 21 N -0.86 -15.27 9.26 -10.36 -0.10 -15.37 16 22 H 0.07 1.24 8.14 -51.93 -0.42 0.82 16 23 H 0.06 0.97 6.64 -51.93 -0.35 0.63 16 24 H 0.08 1.43 6.48 -51.92 -0.34 1.09 16 25 H 0.12 1.67 8.06 -52.49 -0.42 1.25 16 26 H 0.12 1.79 8.06 -52.48 -0.42 1.37 16 27 H 0.38 5.88 7.67 45.56 0.35 6.23 16 28 H 0.26 6.89 8.31 -40.82 -0.34 6.55 16 29 H 0.05 1.29 6.62 -51.93 -0.34 0.95 16 30 H 0.04 0.93 5.70 -51.93 -0.30 0.63 16 31 H 0.32 4.94 9.08 -39.29 -0.36 4.58 16 32 H 0.33 5.81 8.94 -39.29 -0.35 5.46 16 LS Contribution 277.91 15.07 4.19 4.19 Total: -1.00 -28.04 277.91 -7.19 -35.23 By element: Atomic # 1 Polarization: 15.80 SS G_CDS: -2.74 Total: 13.06 kcal Atomic # 6 Polarization: -14.66 SS G_CDS: -2.56 Total: -17.22 kcal Atomic # 7 Polarization: -39.76 SS G_CDS: 0.56 Total: -39.19 kcal Atomic # 8 Polarization: -9.26 SS G_CDS: -0.21 Total: -9.47 kcal Atomic # 14 Polarization: 21.23 SS G_CDS: -5.02 Total: 16.21 kcal Atomic # 17 Polarization: -1.39 SS G_CDS: -1.41 Total: -2.80 kcal Total LS contribution 4.19 Total: 4.19 kcal Total: -28.04 -7.19 -35.23 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260362912.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.398 kcal (2) G-P(sol) polarization free energy of solvation -28.039 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.641 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.190 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.229 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.831 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds