Wall clock time and date at job start Mon Mar 30 2020 06:41:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35902 * 116.99562 * 2 1 4 4 C 1.38728 * 120.05355 * 359.97438 * 3 2 1 5 5 C 1.38232 * 119.93539 * 180.02562 * 4 3 2 6 6 Cl 1.73600 * 119.98522 * 180.02562 * 5 4 3 7 7 C 1.38407 * 120.02806 * 359.97438 * 5 4 3 8 8 C 1.50699 * 119.95272 * 180.02562 * 7 5 4 9 9 C 1.38222 * 120.09906 * 0.04693 * 7 5 4 10 10 C 1.50702 * 119.96616 * 179.97438 * 9 7 5 11 11 H 1.09003 * 109.47211 * 40.00153 * 10 9 7 12 12 N 1.46904 * 109.47148 * 159.99627 * 10 9 7 13 13 C 1.50696 * 109.47387 * 279.99682 * 10 9 7 14 14 H 1.08008 * 119.99908 * 354.51672 * 13 10 9 15 15 C 1.37875 * 120.00365 * 174.51011 * 13 10 9 16 16 N 1.31513 * 119.99993 * 163.73232 * 15 13 10 17 17 Si 1.86803 * 119.99674 * 343.73467 * 15 13 10 18 18 H 1.48501 * 109.46722 * 179.97438 * 17 15 13 19 19 H 1.48497 * 109.47299 * 299.99400 * 17 15 13 20 20 H 1.48500 * 109.47290 * 59.99891 * 17 15 13 21 21 C 1.38175 * 120.07047 * 0.22691 * 9 7 5 22 22 H 1.08994 * 109.47283 * 60.00257 * 1 2 3 23 23 H 1.09000 * 109.46728 * 180.02562 * 1 2 3 24 24 H 1.09005 * 109.46832 * 299.99757 * 1 2 3 25 25 H 1.08005 * 120.02921 * 0.04874 * 4 3 2 26 26 H 1.08996 * 109.47162 * 270.02345 * 8 7 5 27 27 H 1.09008 * 109.47113 * 30.01965 * 8 7 5 28 28 H 1.09002 * 109.47642 * 150.02035 * 8 7 5 29 29 H 1.00904 * 110.99471 * 66.16761 * 12 10 9 30 30 H 1.00901 * 110.99943 * 190.11646 * 12 10 9 31 31 H 0.96996 * 120.00243 * 1.13393 * 16 15 13 32 32 H 1.08001 * 120.01644 * 179.74524 * 21 9 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 1.2913 2.3751 -0.0005 5 6 1.9213 3.6055 -0.0011 6 17 0.9783 5.0630 -0.0011 7 6 3.3036 3.6758 -0.0005 8 6 3.9887 5.0181 -0.0005 9 6 4.0567 2.5168 -0.0004 10 6 5.5616 2.5969 -0.0004 11 1 5.8826 3.4024 0.6601 12 7 6.1197 1.3233 0.4734 13 6 6.0501 2.8698 -1.3996 14 1 5.3504 2.8868 -2.2223 15 6 7.3903 3.0979 -1.6298 16 7 7.8706 3.0183 -2.8515 17 14 8.5237 3.5199 -0.2061 18 1 9.9051 3.7160 -0.7147 19 1 8.0544 4.7682 0.4470 20 1 8.5129 2.4105 0.7809 21 6 3.4312 1.2847 -0.0056 22 1 -0.3633 0.5138 -0.8899 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3633 0.5138 0.8901 25 1 0.2127 2.3200 -0.0002 26 1 4.1539 5.3417 -1.0282 27 1 3.3610 5.7464 0.5132 28 1 4.9465 4.9373 0.5134 29 1 5.9208 0.5774 -0.1762 30 1 7.1118 1.4029 0.6398 31 1 7.2790 2.8153 -3.5929 32 1 4.0205 0.3797 -0.0097 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260667080.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:41:41 Heat of formation + Delta-G solvation = -25.985990 kcal Electronic energy + Delta-G solvation = -16884.699532 eV Core-core repulsion = 14064.138131 eV Total energy + Delta-G solvation = -2820.561401 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -39.93940 -37.86460 -36.29072 -34.51995 -31.95288 -31.69768 -29.78219 -27.61727 -25.95478 -25.52225 -22.85189 -21.17800 -19.76763 -17.81812 -17.53203 -16.40705 -15.58154 -15.00853 -14.87055 -14.41080 -13.91297 -13.77210 -13.51451 -12.81457 -12.61987 -12.42090 -12.03458 -11.92122 -11.65208 -11.58240 -11.51907 -10.96419 -10.62978 -10.46769 -10.24619 -10.19646 -10.04171 -9.34629 -8.57068 -8.23640 -7.73396 -7.56000 -6.55914 -4.29332 1.65046 1.81694 2.41849 3.21424 3.30980 3.45965 3.48859 4.12061 4.30591 5.05063 5.09678 5.14082 5.18055 5.39413 5.46455 5.47913 5.69036 5.84845 6.02966 6.12806 6.19137 6.37106 6.54704 6.63332 6.73741 6.76296 7.13455 7.32238 7.64454 7.71331 8.15824 8.31529 8.44940 8.76453 9.42417 10.75186 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.022123 B = 0.007529 C = 0.006163 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1265.357425 B = 3718.221850 C = 4542.417828 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.316 6.316 3 C 0.123 3.877 4 C -0.221 4.221 5 C -0.001 4.001 6 Cl -0.083 7.083 7 C -0.106 4.106 8 C -0.105 4.105 9 C 0.024 3.976 10 C 0.213 3.787 11 H 0.052 0.948 12 N -0.859 5.859 13 C -0.622 4.622 14 H 0.058 0.942 15 C 0.034 3.966 16 N -0.895 5.895 17 Si 1.042 2.958 18 H -0.283 1.283 19 H -0.280 1.280 20 H -0.274 1.274 21 C -0.131 4.131 22 H 0.052 0.948 23 H 0.096 0.904 24 H 0.052 0.948 25 H 0.128 0.872 26 H 0.074 0.926 27 H 0.057 0.943 28 H 0.073 0.927 29 H 0.330 0.670 30 H 0.331 0.669 31 H 0.270 0.730 32 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.043 -1.010 6.597 13.769 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.229 6.229 3 C 0.079 3.921 4 C -0.240 4.240 5 C -0.028 4.028 6 Cl -0.054 7.054 7 C -0.108 4.108 8 C -0.162 4.162 9 C 0.023 3.977 10 C 0.103 3.897 11 H 0.070 0.930 12 N -0.391 5.391 13 C -0.662 4.662 14 H 0.077 0.923 15 C -0.173 4.173 16 N -0.528 5.528 17 Si 0.870 3.130 18 H -0.208 1.208 19 H -0.206 1.206 20 H -0.201 1.201 21 C -0.150 4.150 22 H 0.071 0.929 23 H 0.114 0.886 24 H 0.071 0.929 25 H 0.146 0.854 26 H 0.093 0.907 27 H 0.076 0.924 28 H 0.092 0.908 29 H 0.142 0.858 30 H 0.146 0.854 31 H 0.080 0.920 32 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -10.946 -0.620 7.597 13.338 hybrid contribution -1.558 -0.037 -1.473 2.144 sum -12.504 -0.656 6.124 13.938 Atomic orbital electron populations 1.22987 0.79144 1.03420 1.01153 1.86081 1.20769 1.26886 1.89193 1.18817 0.92193 0.83310 0.97826 1.20751 0.99678 0.90742 1.12860 1.20357 0.90966 0.86269 1.05166 1.98310 1.72686 1.37422 1.97012 1.19488 0.90551 0.96943 1.03791 1.20724 1.00222 0.92283 1.02957 1.19781 0.97073 0.90082 0.90779 1.18330 0.86048 0.89423 0.95883 0.93031 1.59754 1.19148 1.07985 1.52194 1.22478 0.95442 1.55548 0.92699 0.92340 1.25802 0.96704 0.93270 1.01532 1.70841 1.38098 1.43667 1.00182 0.84026 0.76625 0.77419 0.74880 1.20826 1.20571 1.20075 1.20366 0.90209 0.99367 1.05078 0.92917 0.88588 0.92920 0.85428 0.90738 0.92405 0.90811 0.85818 0.85425 0.91951 0.84484 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.31 9.81 101.05 0.99 1.30 16 2 O -0.32 -4.99 10.50 -19.43 -0.20 -5.19 16 3 C 0.12 2.19 6.69 -39.22 -0.26 1.93 16 4 C -0.22 -3.66 8.82 -39.40 -0.35 -4.01 16 5 C 0.00 -0.02 6.31 -39.52 -0.25 -0.27 16 6 Cl -0.08 -1.27 27.29 -51.86 -1.42 -2.68 16 7 C -0.11 -2.09 5.88 -104.57 -0.61 -2.71 16 8 C -0.11 -1.95 9.00 36.01 0.32 -1.63 16 9 C 0.02 0.51 5.02 -104.65 -0.53 -0.02 16 10 C 0.21 4.82 1.92 -70.02 -0.13 4.69 16 11 H 0.05 1.18 5.09 -51.93 -0.26 0.92 16 12 N -0.86 -18.17 8.50 -6.65 -0.06 -18.23 16 13 C -0.62 -16.32 8.71 -34.44 -0.30 -16.62 16 14 H 0.06 1.71 7.99 -52.48 -0.42 1.29 16 15 C 0.03 0.91 5.44 -17.82 -0.10 0.82 16 16 N -0.89 -26.12 13.70 55.43 0.76 -25.36 16 17 Si 1.04 23.43 26.54 -169.99 -4.51 18.92 16 18 H -0.28 -6.50 7.11 56.52 0.40 -6.10 16 19 H -0.28 -6.01 7.11 56.52 0.40 -5.61 16 20 H -0.27 -5.59 5.53 56.52 0.31 -5.28 16 21 C -0.13 -2.60 9.21 -39.42 -0.36 -2.96 16 22 H 0.05 0.53 7.66 -51.93 -0.40 0.14 16 23 H 0.10 0.79 8.14 -51.93 -0.42 0.37 16 24 H 0.05 0.52 7.66 -51.93 -0.40 0.12 16 25 H 0.13 1.77 6.30 -52.48 -0.33 1.44 16 26 H 0.07 1.44 8.14 -51.93 -0.42 1.01 16 27 H 0.06 0.93 6.90 -51.92 -0.36 0.57 16 28 H 0.07 1.40 6.12 -51.93 -0.32 1.09 16 29 H 0.33 6.86 7.59 -39.29 -0.30 6.56 16 30 H 0.33 6.97 5.67 -39.29 -0.22 6.75 16 31 H 0.27 7.96 8.72 -40.82 -0.36 7.60 16 32 H 0.14 2.67 6.41 -52.49 -0.34 2.33 16 LS Contribution 275.47 15.07 4.15 4.15 Total: -1.00 -28.40 275.47 -6.28 -34.69 By element: Atomic # 1 Polarization: 16.63 SS G_CDS: -3.43 Total: 13.20 kcal Atomic # 6 Polarization: -17.91 SS G_CDS: -1.58 Total: -19.49 kcal Atomic # 7 Polarization: -44.29 SS G_CDS: 0.70 Total: -43.59 kcal Atomic # 8 Polarization: -4.99 SS G_CDS: -0.20 Total: -5.19 kcal Atomic # 14 Polarization: 23.43 SS G_CDS: -4.51 Total: 18.92 kcal Atomic # 17 Polarization: -1.27 SS G_CDS: -1.42 Total: -2.68 kcal Total LS contribution 4.15 Total: 4.15 kcal Total: -28.40 -6.28 -34.69 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260667080.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.700 kcal (2) G-P(sol) polarization free energy of solvation -28.402 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -19.702 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.284 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.686 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.986 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds