Wall clock time and date at job start Mon Mar 30 2020 06:34:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38194 * 119.96064 * 2 1 4 4 C 1.38674 * 119.95741 * 180.29674 * 3 2 1 5 5 O 1.35921 * 120.05755 * 179.97438 * 4 3 2 6 6 C 1.38852 * 119.87691 * 359.97438 * 4 3 2 7 7 Cl 1.73605 * 120.03474 * 179.97438 * 6 4 3 8 8 C 1.38216 * 119.92872 * 359.97438 * 6 4 3 9 9 C 1.38235 * 119.96322 * 180.27104 * 2 1 3 10 10 C 1.50698 * 119.93679 * 359.70290 * 9 2 1 11 11 H 1.09004 * 109.47455 * 325.00062 * 10 9 2 12 12 N 1.46906 * 109.47172 * 205.00090 * 10 9 2 13 13 C 1.52999 * 109.47130 * 84.99841 * 10 9 2 14 14 C 1.50698 * 109.47382 * 184.99816 * 13 10 9 15 15 H 1.08011 * 119.99966 * 359.97438 * 14 13 10 16 16 C 1.37881 * 120.00473 * 180.02562 * 14 13 10 17 17 N 1.31512 * 119.99330 * 0.02562 * 16 14 13 18 18 Si 1.86802 * 120.00248 * 179.97438 * 16 14 13 19 19 H 1.48506 * 109.47032 * 0.02562 * 18 16 14 20 20 H 1.48499 * 109.46953 * 119.99566 * 18 16 14 21 21 H 1.48493 * 109.46959 * 239.99692 * 18 16 14 22 22 H 1.08999 * 109.47302 * 269.72978 * 1 2 3 23 23 H 1.09006 * 109.46622 * 29.72669 * 1 2 3 24 24 H 1.09000 * 109.47101 * 149.72107 * 1 2 3 25 25 H 1.08003 * 120.02739 * 0.25012 * 3 2 1 26 26 H 0.96701 * 114.00319 * 269.97125 * 5 4 3 27 27 H 1.07998 * 119.98125 * 180.02562 * 8 6 4 28 28 H 1.00897 * 110.99851 * 299.99935 * 12 10 9 29 29 H 1.00900 * 110.99909 * 63.95602 * 12 10 9 30 30 H 1.08998 * 109.47117 * 305.00143 * 13 10 9 31 31 H 1.09005 * 109.46859 * 64.99993 * 13 10 9 32 32 H 0.97001 * 119.99730 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1972 1.1973 0.0000 4 6 3.5839 1.1972 -0.0062 5 8 4.2647 2.3736 -0.0068 6 6 4.2755 -0.0068 -0.0119 7 17 6.0115 -0.0117 -0.0204 8 6 3.5803 -1.2014 -0.0108 9 6 2.1974 -1.1976 -0.0057 10 6 1.4417 -2.5014 -0.0051 11 1 0.5338 -2.3948 0.5887 12 7 2.2847 -3.5558 0.5743 13 6 1.0707 -2.8764 -1.4412 14 6 0.2107 -4.1139 -1.4311 15 1 -0.0453 -4.5860 -0.4939 16 6 -0.2485 -4.6442 -2.6181 17 7 0.0644 -4.0702 -3.7592 18 14 -1.3140 -6.1785 -2.6055 19 1 -1.5194 -6.6270 -1.2048 20 1 -2.6287 -5.8733 -3.2248 21 1 -0.6413 -7.2545 -3.3767 22 1 -0.3634 -0.0048 1.0276 23 1 -0.3633 0.8925 -0.5096 24 1 -0.3633 -0.8875 -0.5182 25 1 1.6570 2.1325 0.0041 26 1 4.4582 2.7157 -0.8903 27 1 4.1174 -2.1384 -0.0148 28 1 3.1332 -3.6740 0.0413 29 1 2.4901 -3.3630 1.5431 30 1 0.5204 -2.0553 -1.9006 31 1 1.9787 -3.0697 -2.0124 32 1 -0.2589 -4.4430 -4.5943 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261029721.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:34:56 Heat of formation + Delta-G solvation = -37.873315 kcal Electronic energy + Delta-G solvation = -16580.587768 eV Core-core repulsion = 13759.510895 eV Total energy + Delta-G solvation = -2821.076874 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -40.02603 -37.55520 -36.43069 -34.76663 -32.56773 -32.20584 -29.27300 -28.26688 -26.66140 -24.46470 -22.42721 -21.39589 -19.85472 -18.08072 -16.73024 -16.27370 -15.76962 -15.21529 -14.91721 -14.36965 -14.13134 -13.64447 -13.39892 -13.02336 -12.61144 -12.44407 -12.09424 -11.95655 -11.55323 -11.23686 -11.09214 -10.99358 -10.63902 -10.53681 -10.46984 -10.28927 -9.65018 -9.11220 -8.65909 -8.34305 -8.11635 -8.03402 -5.95704 -3.94868 1.19509 1.30747 2.20216 3.34882 3.42713 3.47911 3.56871 4.14380 4.51108 4.83262 5.03096 5.20545 5.28742 5.40745 5.45993 5.63167 5.71408 5.87899 5.91471 6.13222 6.20703 6.30110 6.36945 6.64568 6.79353 6.85347 7.46528 7.55717 7.64862 7.91129 8.04243 8.10066 8.46807 9.11751 9.67739 11.15917 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.030035 B = 0.005422 C = 0.005048 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 932.036588 B = 5163.318089 C = 5545.718304 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.125 4.125 2 C -0.057 4.057 3 C -0.133 4.133 4 C 0.099 3.901 5 O -0.490 6.490 6 C -0.062 4.062 7 Cl -0.071 7.071 8 C -0.101 4.101 9 C -0.093 4.093 10 C 0.132 3.868 11 H 0.086 0.914 12 N -0.822 5.822 13 C 0.037 3.963 14 C -0.495 4.495 15 H 0.064 0.936 16 C 0.051 3.949 17 N -0.902 5.902 18 Si 0.892 3.108 19 H -0.272 1.272 20 H -0.287 1.287 21 H -0.286 1.286 22 H 0.071 0.929 23 H 0.065 0.935 24 H 0.092 0.908 25 H 0.133 0.867 26 H 0.387 0.613 27 H 0.133 0.867 28 H 0.335 0.665 29 H 0.324 0.676 30 H 0.023 0.977 31 H 0.016 0.984 32 H 0.258 0.742 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.375 10.724 7.060 14.335 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.182 4.182 2 C -0.057 4.057 3 C -0.152 4.152 4 C 0.053 3.947 5 O -0.300 6.300 6 C -0.089 4.089 7 Cl -0.042 7.042 8 C -0.120 4.120 9 C -0.096 4.096 10 C 0.020 3.980 11 H 0.104 0.896 12 N -0.350 5.350 13 C 0.000 4.000 14 C -0.533 4.533 15 H 0.082 0.918 16 C -0.149 4.149 17 N -0.542 5.542 18 Si 0.721 3.279 19 H -0.197 1.197 20 H -0.213 1.213 21 H -0.213 1.213 22 H 0.089 0.911 23 H 0.084 0.916 24 H 0.111 0.889 25 H 0.151 0.849 26 H 0.243 0.757 27 H 0.151 0.849 28 H 0.149 0.851 29 H 0.135 0.865 30 H 0.042 0.958 31 H 0.035 0.965 32 H 0.067 0.933 Dipole moment (debyes) X Y Z Total from point charges 5.860 10.126 7.324 13.803 hybrid contribution 0.526 0.105 -0.600 0.805 sum 6.386 10.231 6.725 13.809 Atomic orbital electron populations 1.20978 0.90250 1.04410 1.02535 1.19794 0.96882 0.91629 0.97440 1.21226 0.92269 0.98738 1.02965 1.18046 0.89682 0.84035 1.02900 1.84831 1.76191 1.35619 1.33366 1.21279 0.84476 0.94672 1.08493 1.98343 1.09915 1.98926 1.97028 1.20798 0.93909 0.96493 1.00823 1.21349 0.93194 0.98300 0.96707 1.20888 0.93870 0.82352 1.00914 0.89624 1.58813 1.23230 1.47808 1.05131 1.19161 0.96903 0.96910 0.87066 1.21183 1.29415 1.10030 0.92707 0.91817 1.25021 0.96792 0.97350 0.95701 1.69978 1.46269 1.40557 0.97393 0.86529 0.80058 0.83341 0.78017 1.19690 1.21335 1.21261 0.91073 0.91615 0.88907 0.84905 0.75710 0.84923 0.85128 0.86510 0.95840 0.96528 0.93254 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -1.75 9.21 36.01 0.33 -1.42 16 2 C -0.06 -0.87 5.88 -104.64 -0.62 -1.48 16 3 C -0.13 -1.85 9.64 -39.44 -0.38 -2.23 16 4 C 0.10 1.40 6.70 -39.19 -0.26 1.14 16 5 O -0.49 -6.01 12.96 -19.49 -0.25 -6.26 16 6 C -0.06 -0.93 6.33 -39.36 -0.25 -1.18 16 7 Cl -0.07 -0.96 28.51 -51.86 -1.48 -2.44 16 8 C -0.10 -1.59 9.05 -39.57 -0.36 -1.95 16 9 C -0.09 -1.56 5.05 -104.61 -0.53 -2.08 16 10 C 0.13 2.50 2.23 -68.86 -0.15 2.34 16 11 H 0.09 1.63 7.00 -51.93 -0.36 1.27 16 12 N -0.82 -14.53 8.54 -5.65 -0.05 -14.58 16 13 C 0.04 0.89 4.35 -27.88 -0.12 0.77 16 14 C -0.49 -13.42 8.84 -34.44 -0.30 -13.72 16 15 H 0.06 1.73 7.74 -52.48 -0.41 1.33 16 16 C 0.05 1.44 5.46 -17.82 -0.10 1.34 16 17 N -0.90 -26.59 13.29 55.43 0.74 -25.85 16 18 Si 0.89 21.58 29.54 -169.99 -5.02 16.56 16 19 H -0.27 -6.48 7.11 56.52 0.40 -6.08 16 20 H -0.29 -6.87 7.11 56.52 0.40 -6.47 16 21 H -0.29 -6.94 7.11 56.52 0.40 -6.53 16 22 H 0.07 0.87 8.14 -51.93 -0.42 0.45 16 23 H 0.06 0.80 8.08 -51.93 -0.42 0.38 16 24 H 0.09 1.53 5.47 -51.93 -0.28 1.25 16 25 H 0.13 1.54 8.06 -52.48 -0.42 1.12 16 26 H 0.39 3.09 9.06 45.56 0.41 3.50 16 27 H 0.13 1.97 6.28 -52.49 -0.33 1.64 16 28 H 0.33 5.70 7.20 -39.29 -0.28 5.42 16 29 H 0.32 4.82 9.06 -39.29 -0.36 4.47 16 30 H 0.02 0.60 7.00 -51.93 -0.36 0.24 16 31 H 0.02 0.44 8.14 -51.93 -0.42 0.01 16 32 H 0.26 7.23 8.31 -40.82 -0.34 6.89 16 LS Contribution 286.44 15.07 4.32 4.32 Total: -1.00 -30.58 286.44 -7.28 -37.86 By element: Atomic # 1 Polarization: 11.67 SS G_CDS: -2.80 Total: 8.88 kcal Atomic # 6 Polarization: -15.75 SS G_CDS: -2.74 Total: -18.48 kcal Atomic # 7 Polarization: -41.12 SS G_CDS: 0.69 Total: -40.43 kcal Atomic # 8 Polarization: -6.01 SS G_CDS: -0.25 Total: -6.26 kcal Atomic # 14 Polarization: 21.58 SS G_CDS: -5.02 Total: 16.56 kcal Atomic # 17 Polarization: -0.96 SS G_CDS: -1.48 Total: -2.44 kcal Total LS contribution 4.32 Total: 4.32 kcal Total: -30.58 -7.28 -37.86 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261029721.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.011 kcal (2) G-P(sol) polarization free energy of solvation -30.581 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.592 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.281 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.862 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.873 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds