Wall clock time and date at job start Mon Mar 30 2020 06:41:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35922 * 116.99893 * 2 1 4 4 C 1.38857 * 120.05924 * 269.97207 * 3 2 1 5 5 Cl 1.73598 * 120.03744 * 0.02562 * 4 3 2 6 6 C 1.38217 * 119.92476 * 180.02562 * 4 3 2 7 7 C 1.50694 * 119.98012 * 180.02562 * 6 4 3 8 8 C 1.38291 * 120.04078 * 0.02562 * 6 4 3 9 9 C 1.38237 * 120.11955 * 359.74553 * 8 6 4 10 10 C 1.38200 * 120.07436 * 0.50735 * 9 8 6 11 11 C 1.50703 * 120.01843 * 179.77188 * 10 9 8 12 12 H 1.08998 * 109.47145 * 219.72158 * 11 10 9 13 13 N 1.46900 * 109.47047 * 339.72382 * 11 10 9 14 14 C 1.50700 * 109.47148 * 99.72137 * 11 10 9 15 15 H 1.08002 * 119.99770 * 0.02562 * 14 11 10 16 16 C 1.37871 * 120.00083 * 179.97438 * 14 11 10 17 17 N 1.31514 * 120.00147 * 0.02562 * 16 14 11 18 18 Si 1.86803 * 120.00278 * 180.02562 * 16 14 11 19 19 H 1.48494 * 109.47228 * 179.97438 * 18 16 14 20 20 H 1.48501 * 109.46793 * 300.00001 * 18 16 14 21 21 H 1.48500 * 109.47000 * 60.00094 * 18 16 14 22 22 H 1.08997 * 109.46779 * 60.00003 * 1 2 3 23 23 H 1.08995 * 109.47265 * 179.97438 * 1 2 3 24 24 H 1.09000 * 109.46972 * 300.00052 * 1 2 3 25 25 H 1.09006 * 109.47105 * 90.00204 * 7 6 4 26 26 H 1.08997 * 109.47224 * 210.00527 * 7 6 4 27 27 H 1.09009 * 109.47213 * 330.00643 * 7 6 4 28 28 H 1.07996 * 119.93725 * 180.02562 * 8 6 4 29 29 H 1.07995 * 119.96344 * 180.27957 * 9 8 6 30 30 H 1.00907 * 110.99867 * 296.04432 * 13 11 10 31 31 H 1.00896 * 111.00376 * 59.99771 * 13 11 10 32 32 H 0.97005 * 119.99661 * 359.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2111 0.0000 4 6 2.3624 1.8305 -1.2018 5 17 1.9695 1.0594 -2.7067 6 6 2.9903 3.0618 -1.1986 7 6 3.3336 3.7355 -2.5021 8 6 3.3038 3.6760 0.0002 9 6 2.9855 3.0630 1.1977 10 6 2.3623 1.8295 1.2001 11 6 2.0205 1.1601 2.5063 12 1 2.2162 0.0907 2.4287 13 7 2.8442 1.7320 3.5799 14 6 0.5631 1.3827 2.8186 15 1 -0.0540 1.9516 2.1390 16 6 0.0173 0.8592 3.9714 17 7 0.7686 0.1660 4.7988 18 14 -1.7894 1.1345 4.3582 19 1 -2.1264 0.4739 5.6447 20 1 -2.0564 2.5914 4.4644 21 1 -2.6216 0.5564 3.2727 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3633 -1.0276 -0.0005 24 1 -0.3633 0.5138 0.8900 25 1 2.5009 4.3649 -2.8162 26 1 4.2240 4.3502 -2.3700 27 1 3.5242 2.9786 -3.2631 28 1 3.7940 4.6382 0.0008 29 1 3.2273 3.5470 2.1323 30 1 3.8227 1.5395 3.4264 31 1 2.6808 2.7234 3.6719 32 1 1.7067 0.0227 4.5978 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261271181.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:41:44 Heat of formation + Delta-G solvation = -24.377322 kcal Electronic energy + Delta-G solvation = -17208.027053 eV Core-core repulsion = 14387.535409 eV Total energy + Delta-G solvation = -2820.491644 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -39.78505 -36.99963 -36.32700 -35.06045 -32.17619 -30.59212 -29.75881 -27.14790 -26.43517 -24.90980 -22.47036 -21.75097 -20.16432 -17.03091 -16.87594 -16.15923 -15.68584 -14.99215 -14.53059 -14.03934 -13.77151 -13.66182 -13.43033 -13.35546 -12.65308 -12.22843 -12.11533 -11.85681 -11.56008 -11.38010 -10.96835 -10.82967 -10.77947 -10.63505 -10.19629 -9.99915 -9.32944 -8.91827 -8.39455 -8.24633 -7.84706 -7.58167 -6.22933 -4.06471 1.45168 1.60868 2.43360 3.42265 3.44033 3.62443 3.77587 4.43635 4.55747 4.97831 5.18261 5.34157 5.45128 5.56398 5.64629 5.71903 5.81692 5.91257 5.92535 6.03431 6.14304 6.29398 6.52963 6.58966 6.70375 6.75405 7.04886 7.20876 7.90332 8.06142 8.21205 8.56532 8.68971 8.98308 9.76106 11.16407 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.026257 B = 0.007664 C = 0.006675 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1066.121622 B = 3652.749309 C = 4193.956976 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.325 6.325 3 C 0.113 3.887 4 C -0.056 4.056 5 Cl -0.075 7.075 6 C -0.096 4.096 7 C -0.110 4.110 8 C -0.116 4.116 9 C -0.116 4.116 10 C -0.078 4.078 11 C 0.242 3.758 12 H 0.050 0.950 13 N -0.830 5.830 14 C -0.604 4.604 15 H 0.045 0.955 16 C 0.041 3.959 17 N -0.885 5.885 18 Si 1.059 2.941 19 H -0.282 1.282 20 H -0.290 1.290 21 H -0.289 1.289 22 H 0.029 0.971 23 H 0.084 0.916 24 H 0.086 0.914 25 H 0.069 0.931 26 H 0.066 0.934 27 H 0.068 0.932 28 H 0.124 0.876 29 H 0.126 0.874 30 H 0.304 0.696 31 H 0.326 0.674 32 H 0.291 0.709 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.354 5.453 -11.617 13.264 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.241 6.241 3 C 0.068 3.932 4 C -0.084 4.084 5 Cl -0.046 7.046 6 C -0.097 4.097 7 C -0.167 4.167 8 C -0.134 4.134 9 C -0.134 4.134 10 C -0.081 4.081 11 C 0.133 3.867 12 H 0.068 0.932 13 N -0.358 5.358 14 C -0.643 4.643 15 H 0.064 0.936 16 C -0.170 4.170 17 N -0.519 5.519 18 Si 0.888 3.112 19 H -0.208 1.208 20 H -0.216 1.216 21 H -0.216 1.216 22 H 0.048 0.952 23 H 0.102 0.898 24 H 0.105 0.895 25 H 0.087 0.913 26 H 0.084 0.916 27 H 0.087 0.913 28 H 0.142 0.858 29 H 0.143 0.857 30 H 0.115 0.885 31 H 0.140 0.860 32 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 1.825 4.360 -10.119 11.169 hybrid contribution 1.405 1.133 -2.125 2.788 sum 3.230 5.492 -12.245 13.803 Atomic orbital electron populations 1.23238 0.78336 1.02958 1.02020 1.85901 1.20499 1.23584 1.94121 1.18256 0.97845 0.87202 0.89902 1.21293 1.05883 0.94903 0.86275 1.98306 1.92816 1.81308 1.32149 1.19458 1.00548 0.93420 0.96256 1.20754 1.01508 1.00366 0.94033 1.20864 1.01477 0.99830 0.91279 1.21001 0.99334 0.95064 0.98008 1.21886 0.94075 0.94094 0.98089 1.18301 0.94244 0.94054 0.80099 0.93203 1.59430 1.07981 1.18636 1.49733 1.21525 0.91920 1.40609 1.10206 0.93634 1.25564 1.05377 0.93391 0.92622 1.70539 1.10454 1.34229 1.36644 0.83718 0.74967 0.76163 0.76387 1.20759 1.21620 1.21579 0.95236 0.89802 0.89532 0.91270 0.91551 0.91273 0.85792 0.85661 0.88535 0.86030 0.89595 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.54 11.02 101.05 1.11 1.66 16 2 O -0.32 -6.91 9.11 -19.50 -0.18 -7.09 16 3 C 0.11 2.33 5.68 -39.20 -0.22 2.11 16 4 C -0.06 -1.01 6.33 -39.36 -0.25 -1.26 16 5 Cl -0.07 -1.19 26.84 -51.86 -1.39 -2.58 16 6 C -0.10 -1.51 5.88 -104.61 -0.62 -2.12 16 7 C -0.11 -1.32 9.61 36.00 0.35 -0.98 16 8 C -0.12 -1.79 9.70 -39.56 -0.38 -2.18 16 9 C -0.12 -2.06 9.25 -39.60 -0.37 -2.43 16 10 C -0.08 -1.64 5.03 -104.48 -0.53 -2.17 16 11 C 0.24 5.79 2.12 -70.01 -0.15 5.64 16 12 H 0.05 1.35 7.72 -51.93 -0.40 0.95 16 13 N -0.83 -18.25 7.28 -6.65 -0.05 -18.29 16 14 C -0.60 -15.81 6.72 -34.44 -0.23 -16.04 16 15 H 0.05 1.21 6.87 -52.49 -0.36 0.85 16 16 C 0.04 1.12 5.39 -17.82 -0.10 1.03 16 17 N -0.89 -25.91 13.51 55.43 0.75 -25.16 16 18 Si 1.06 24.33 29.90 -169.99 -5.08 19.25 16 19 H -0.28 -6.58 7.11 56.52 0.40 -6.18 16 20 H -0.29 -6.45 7.11 56.52 0.40 -6.05 16 21 H -0.29 -6.31 7.11 56.52 0.40 -5.90 16 22 H 0.03 0.51 8.14 -51.93 -0.42 0.09 16 23 H 0.08 1.43 8.14 -51.93 -0.42 1.01 16 24 H 0.09 1.87 5.01 -51.93 -0.26 1.61 16 25 H 0.07 0.77 8.14 -51.93 -0.42 0.35 16 26 H 0.07 0.67 8.08 -51.93 -0.42 0.25 16 27 H 0.07 0.82 6.90 -51.92 -0.36 0.46 16 28 H 0.12 1.52 8.06 -52.49 -0.42 1.10 16 29 H 0.13 2.06 6.25 -52.49 -0.33 1.74 16 30 H 0.30 5.92 9.06 -39.29 -0.36 5.57 16 31 H 0.33 6.81 7.28 -39.29 -0.29 6.53 16 32 H 0.29 8.58 6.39 -40.82 -0.26 8.32 16 LS Contribution 280.73 15.07 4.23 4.23 Total: -1.00 -29.11 280.73 -6.62 -35.73 By element: Atomic # 1 Polarization: 14.18 SS G_CDS: -3.52 Total: 10.67 kcal Atomic # 6 Polarization: -15.37 SS G_CDS: -1.38 Total: -16.75 kcal Atomic # 7 Polarization: -44.16 SS G_CDS: 0.70 Total: -43.46 kcal Atomic # 8 Polarization: -6.91 SS G_CDS: -0.18 Total: -7.09 kcal Atomic # 14 Polarization: 24.33 SS G_CDS: -5.08 Total: 19.25 kcal Atomic # 17 Polarization: -1.19 SS G_CDS: -1.39 Total: -2.58 kcal Total LS contribution 4.23 Total: 4.23 kcal Total: -29.11 -6.62 -35.73 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261271181.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.354 kcal (2) G-P(sol) polarization free energy of solvation -29.114 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.760 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.617 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.731 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.377 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds